Study Info
INDA Accessions: INRP000172
INSDC Accessions: PRJEB80587, ERP164558
- Title: RNAseq study of leaf, stem and root from Polygonum posumbu syn. Persicaria posumbu
- Data Type : RNASeq
- Descriptive Title: RNA sequencing and transcriptome assembly of Polygonum posumbu to identify genes involved in flavonoid biosynthesis pathway
-
Organism:
Scientific Name(Taxon Id): Persicaria posumbu (137685) Common Name:
Other Info
- Abstract: Polygonum posumbu is an important medicinal plant that is used by traditional healers in fever, dyspepsia and blood pressure regulation. Previously, we identified and quantified seven flavonoid compounds from three different tissues of the plant. To understand the biosynthetic pathway of flavonoids, we sequenced and compared the P. posumbu tissues like leaf, stem, root transcriptome using high throughput RNA sequencing. After quality filtration, an average of 7.6 Gb clean reads were obtained for leaf, stem and root tissues and assembled 162,546 transcripts.
- Linked publications: 38408515 ,
- Center Name: P. Premi Devi and Sudripta Das, Institute of Bioresources and Sustainable Development (IBSD)
- Number of Base(Total) Mbp: 0
- Size in bytes(Total):
- Number of sample:
- Number of Runs:
- Number of Sequences:
- Number of Assembly:
- Number of Variant files:
Back