Study Info
INDA Accessions: INRP000171
INSDC Accessions: PRJEB104476, ERP185769
- Title: Network Program on Antimicrobial Resistance, Superbugs and One Health
- Data Type : Whole Genome Sequencing
- Descriptive Title: The program is developed in hub and spoke model. More than 28 institutes are working in the field of Healthcare, Veterinary and Fisheries and Environmental sector. More than 90 team members that includes PIs, Co-PIs and Research Fellows are working in this program. This study is targeting to identified ARGs present in different microbial isolates, cultured from the specimen obtained from Healthcare, Environmental and Veterinary and Fisheries sources in the Gujarat state.
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Organism:
Scientific Name(Taxon Id): Acinetobacter baumannii (470) Common Name:
Scientific Name(Taxon Id): Acinetobacter schindleri (108981) Common Name:
Scientific Name(Taxon Id): Acinetobacter sp. (472) Common Name:
Scientific Name(Taxon Id): Aeromonas eucrenophila (649) Common Name:
Scientific Name(Taxon Id): Aeromonas media (651) Common Name:
Scientific Name(Taxon Id): Aeromonas salmonicida (645) Common Name:
Scientific Name(Taxon Id): Aeromonas sp. (647) Common Name:
Scientific Name(Taxon Id): Aeromonas veronii (654) Common Name:
Scientific Name(Taxon Id): Alcaligenes faecalis (511) Common Name:
Scientific Name(Taxon Id): Bacillus cereus (1396) Common Name:
Scientific Name(Taxon Id): Bacillus pumilus (1408) Common Name:
Scientific Name(Taxon Id): Bacillus sp. (1409) Common Name:
Scientific Name(Taxon Id): Bacteria sp. (1869227) Common Name:
Scientific Name(Taxon Id): Bacteria sp. (1869227) Common Name:
Scientific Name(Taxon Id): Bacteroides sp. (29523) Common Name:
Scientific Name(Taxon Id): Citrobacter braakii (57706) Common Name:
Scientific Name(Taxon Id): Citrobacter freundii (546) Common Name:
Scientific Name(Taxon Id): Entamoeba hartmanni (110767) Common Name:
Scientific Name(Taxon Id): Enterobacter aerogenes (548) Common Name:
Scientific Name(Taxon Id): Enterobacter cloacae (550) Common Name:
Scientific Name(Taxon Id): Enterobacter sp. (42895) Common Name:
Scientific Name(Taxon Id): Enterococcus faecalis (1351) Common Name:
Scientific Name(Taxon Id): Enterococcus hirae (1354) Common Name:
Scientific Name(Taxon Id): Enterococcus sp. (35783) Common Name:
Scientific Name(Taxon Id): Escherichia coli (562) Common Name:
Scientific Name(Taxon Id): Exiguobacterium sp. (44751) Common Name:
Scientific Name(Taxon Id): Hathewaya sp. (2021467) Common Name:
Scientific Name(Taxon Id): Klebsiella ornithinolytica (54291) Common Name:
Scientific Name(Taxon Id): Klebsiella oxytoca (571) Common Name:
Scientific Name(Taxon Id): Klebsiella pneumoniae (573) Common Name:
Scientific Name(Taxon Id): Kurthia sp. (1963358) Common Name:
Scientific Name(Taxon Id): Lactobacillus plantarum (1919) Common Name:
Scientific Name(Taxon Id): Lactobacillus sp. (1591) Common Name:
Scientific Name(Taxon Id): Macrococcus sp. (1871621) Common Name:
Scientific Name(Taxon Id): Morganella morganii (582) Common Name:
Scientific Name(Taxon Id): Neisseria meningitidis (487) Common Name:
Scientific Name(Taxon Id): Other (32644) Common Name:
Scientific Name(Taxon Id): Pediococcus parvulus (54062) Common Name:
Scientific Name(Taxon Id): Pediococcus pentosaceus (1255) Common Name:
Scientific Name(Taxon Id): Proteus hauseri (183417) Common Name:
Scientific Name(Taxon Id): Proteus mirabilis (584) Common Name:
Scientific Name(Taxon Id): Proteus morganii (582) Common Name:
Scientific Name(Taxon Id): Proteus penneri (102862) Common Name:
Scientific Name(Taxon Id): Proteus rettgeri (587) Common Name:
Scientific Name(Taxon Id): Proteus vulgaris (585) Common Name:
Scientific Name(Taxon Id): Pseudomonas aeruginosa (287) Common Name:
Scientific Name(Taxon Id): Pseudomonas anguilliseptica (53406) Common Name:
Scientific Name(Taxon Id): Pseudomonas maltophilia (40324) Common Name:
Scientific Name(Taxon Id): Pseudomonas mendocina (300) Common Name:
Scientific Name(Taxon Id): Pseudomonas pertucinogena (86175) Common Name:
Scientific Name(Taxon Id): Pseudomonas sp. (306) Common Name:
Scientific Name(Taxon Id): Pseudomonas stutzeri (316) Common Name:
Scientific Name(Taxon Id): Psychrobacter sp. (56811) Common Name:
Scientific Name(Taxon Id): Rhodococcus sp. (1831) Common Name:
Scientific Name(Taxon Id): Salmonella Typhi (90370) Common Name:
Scientific Name(Taxon Id): Salmonella sp. (599) Common Name:
Scientific Name(Taxon Id): Staphylococcus hominis (1290) Common Name:
Scientific Name(Taxon Id): Staphylococcus saprophyticus (29385) Common Name:
Scientific Name(Taxon Id): Staphylococcus sciuri (1296) Common Name:
Scientific Name(Taxon Id): Staphylococcus simulans (1286) Common Name:
Scientific Name(Taxon Id): Stenotrophomonas maltophilia (40324) Common Name:
Scientific Name(Taxon Id): Streptococcus lutetiensis (150055) Common Name:
Scientific Name(Taxon Id): Streptococcus sp. (1306) Common Name:
Scientific Name(Taxon Id): Vagococcus sp. (1933889) Common Name:
Scientific Name(Taxon Id): Vibrio alginolyticus (663) Common Name:
Other Info
- Abstract: The program is developed in hub and spoke model. More than 28 institutes are working in the field of Healthcare, Veterinary and Fisheries and Environmental sector. More than 90 team members that includes PIs, Co-PIs and Research Fellows are working in this program. This study is targeting to identified ARGs present in different microbial isolates, cultured from the specimen obtained from Healthcare, Environmental and Veterinary and Fisheries sources in the Gujarat state.
- Linked publications:
- Center Name: Gujarat Biotechnology Research Centre
- Number of Base(Total) Mbp: 286,274,937,947
- Size in bytes(Total): 152,222,766,452
- Number of sample:
- Number of Runs:
- Number of Sequences:
- Number of Assembly:
- Number of Variant files:
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