7JJI image
Deposition Date 2020-07-26
Release Date 2020-08-26
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7JJI
Keywords:
Title:
Structure of SARS-CoV-2 3Q-2P full-length prefusion spike trimer (C3 symmetry)
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Mutagens:R682Q, R683Q, R685Q, K986P, V987P
Chain IDs:A, B, C
Chain Length:1273
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
Primary Citation

Abstact

Vaccine efforts to combat the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which is responsible for the current coronavirus disease 2019 (COVID-19) pandemic, are focused on SARS-CoV-2 spike glycoprotein, the primary target for neutralizing antibodies. We performed cryo-election microscopy and site-specific glycan analysis of one of the leading subunit vaccine candidates from Novavax, which is based on a full-length spike protein formulated in polysorbate 80 detergent. Our studies reveal a stable prefusion conformation of the spike immunogen with slight differences in the S1 subunit compared with published spike ectodomain structures. We also observed interactions between the spike trimers, allowing formation of higher-order spike complexes. This study confirms the structural integrity of the full-length spike protein immunogen and provides a basis for interpreting immune responses to this multivalent nanoparticle immunogen.

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Primary Citation of related structures
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