5GW8 image
Deposition Date 2016-09-09
Release Date 2017-09-27
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5GW8
Keywords:
Title:
Crystal structure of a putative DAG-like lipase (MgMDL2) from Malassezia globosa
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hypothetical secretory lipase (Family 3)
Gene (Uniprot):MDL2
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)
Primary Citation
Malassezia globosa MgMDL2 lipase: Crystal structure and rational modification of substrate specificity.
Biochem. Biophys. Res. Commun. 488 259 265 (2017)
PMID: 28433636 DOI: 10.1016/j.bbrc.2017.04.103

Abstact

Lipases play an important role in physiological metabolism and diseases, and also have multiple industrial applications. Rational modification of lipase specificity may increase the commercial utility of this group of enzymes, but is hindered by insufficient mechanistic understanding. Here, we report the 2.0 Å resolution crystal structure of a mono- and di-acylglycerols lipase from Malassezia globosa (MgMDL2). Interestingly, residues Phe278 and Glu282 were found to involve in substrate recognition because mutation on each residue led to convert MgMDL2 to a triacylglycerol (TAG) lipase. The Phe278Ala and Glu282Ala mutants also acquired ability to synthesize TAGs by esterification of glycerol and fatty acids. By in silicon analysis, steric hindrance of these residues seemed to be key factors for the altered substrate specificity. Our work may shed light on understanding the unique substrate selectivity mechanism of mono- and di-acylglycerols lipases, and provide a new insight for engineering biocatalysts with desired catalytic behaviors for biotechnological application.

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