3LY6 image
Deposition Date 2010-02-26
Release Date 2010-08-18
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3LY6
Keywords:
Title:
Crystal structure of human transglutaminase 2 complex with adenosine 5' Triphosphate
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.14 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein-glutamine gamma-glutamyltransferase 2
Gene (Uniprot):TGM2
Chain IDs:A, B, C
Chain Length:697
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal structure of human transglutaminase 2 in complex with adenosine triphosphate
Int.J.Biol.Macromol. 47 190 195 (2010)
PMID: 20450932 DOI: 10.1016/j.ijbiomac.2010.04.023

Abstact

Transglutaminase 2 (TG2) is a calcium-dependent multifunctional protein associated with various human diseases. We determined the crystal structure of human TG2 in complex with adenosine triphosphate (ATP). The ATP molecule binds to the previously identified guanosine diphosphate (GDP) binding pocket but has different hydrogen bonds and ion interaction with protein. The four residues Arg476, Arg478, Val479 and Tyr583, all of which are involved in both ATP and GDP binding by hydrogen bonds, might play important roles in the stabilization of TG2 by ATP or GDP. However, Ser482 and Arg580, which are involved in GDP binding, do not form hydrogen bond with ATP. Additionally, we newly discovered an intramolecular disulfide bond between Cys230 and Cys370, which formation might regulate the enzymatic activity of TG2.

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Disease

Primary Citation of related structures