3HYU image
Deposition Date 2009-06-23
Release Date 2010-06-23
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3HYU
Title:
Crystal structure of the altitude adapted hemoglobin of guinea pig.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.67 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemoglobin subunit alpha
Gene (Uniprot):HBA
Chain IDs:A
Chain Length:141
Number of Molecules:1
Biological Source:Cavia porcellus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemoglobin subunit beta
Gene (Uniprot):HBB
Chain IDs:B
Chain Length:146
Number of Molecules:1
Biological Source:Cavia porcellus
Primary Citation
Structure of the altitude adapted hemoglobin of guinea pig in the R2-state.
Plos One 5 e12389 e12389 (2010)
PMID: 20811494 DOI: 10.1371/journal.pone.0012389

Abstact

BACKGROUND Guinea pigs are considered to be genetically adapted to a high altitude environment based on the consistent finding of a high oxygen affinity of their blood. METHODOLOGY/PRINCIPAL FINDINGS The crystal structure of guinea pig hemoglobin at 1.8 A resolution suggests that the increased oxygen affinity of guinea pig hemoglobin can be explained by two factors, namely a decreased stability of the T-state and an increased stability of the R2-state. The destabilization of the T-state can be related to the substitution of a highly conserved proline (P44) to histidine (H44) in the alpha-subunit, which causes a steric hindrance with H97 of the beta-subunit in the switch region. The stabilization of the R2-state is caused by two additional salt bridges at the beta1/beta2 interface. CONCLUSIONS/SIGNIFICANCE Both factors together are supposed to serve to shift the equilibrium between the conformational states towards the high affinity relaxed states resulting in an increased oxygen affinity.

Legend

Protein

Chemical

Disease

Primary Citation of related structures