2MTM image
Deposition Date 2014-08-21
Release Date 2015-09-02
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2MTM
Title:
NMR structure of RCB-1 peptide
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative uncharacterized protein
Gene (Uniprot):RCOM_0079210
Chain IDs:A
Chain Length:19
Number of Molecules:1
Biological Source:Ricinus communis
Ligand Molecules
Primary Citation
Synthesis, Structural Characterization, and Bioactivity of the Stable Peptide RCB-1 from Ricinus communis.
J Nat Prod 78 2545 2551 (2015)
PMID: 26509914 DOI: 10.1021/acs.jnatprod.5b00463

Abstact

The Ricinus communis biomarker peptides RCB-1 to -3 comprise homologous sequences of 19 (RCB-1) or 18 (RCB-2 and -3) amino acid residues. They all include four cysteine moieties, which form two disulfide bonds. However, neither the 3D structure nor the biological activity of any of these peptides is known. The synthesis of RCB-1, using microwave-assisted, Fmoc-based solid-phase peptide synthesis, and a method for its oxidative folding are reported. The tertiary structure of RCB-1, subsequently established using solution-state NMR, reveals a twisted loop fold with antiparallel β-sheets reinforced by the two disulfide bonds. Moreover, RCB-1 was tested for antibacterial, antifungal, and cytotoxic activity, as well as in a serum stability assay, in which it proved to be remarkably stable.

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Primary Citation of related structures