2FV4 image
Deposition Date 2006-01-29
Release Date 2006-06-13
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2FV4
Title:
NMR solution structure of the yeast kinetochore Spc24/Spc25 globular domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
30
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hypothetical 25.2 kDa protein in AFG3-SEB2 intergenic region
Gene (Uniprot):SPC25
Chain IDs:A
Chain Length:98
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region
Gene (Uniprot):SPC24
Chain IDs:B
Chain Length:77
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Ligand Molecules
Primary Citation
Structure of a central component of the yeast kinetochore: the spc24p/spc25p globular domain.
Structure 6 1003 1009 (2006)
PMID: 16765893 DOI: 10.1016/j.str.2006.04.007

Abstact

The Ndc80 complex, a kinetochore component conserved from yeast to humans, is essential for proper chromosome alignment and segregation during mitosis. It is an approximately 570 A long, rod-shaped assembly of four proteins--Ndc80p (Hec1), Nuf2p, Spc24p, and Spc25p--with globular regions at either end of a central shaft. The complex bridges from the centromere-proximal inner kinetochore layer at its Spc24/Spc25 globular end to the microtubule binding outer kinetochore layer at its Ndc80/Nuf2 globular end. We report the atomic structures of the Spc24/Spc25 globular domain, determined both by X-ray crystallography at 1.9 A resolution and by NMR. Spc24 and Spc25 fold tightly together into a single globular entity with pseudo-2-fold symmetry. Conserved residues line a common hydrophobic core and the bottom of a cleft, indicating that the functional orthologs from other eukaryotes will have the same structure and suggesting a docking site for components of the inner kinetochore.

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Primary Citation of related structures
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