2CNX image
Deposition Date 2006-05-25
Release Date 2006-07-03
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2CNX
Keywords:
Title:
WDR5 and Histone H3 Lysine 4 dimethyl complex at 2.1 angstrom
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:WD-REPEAT PROTEIN 5
Gene (Uniprot):WDR5
Chain IDs:A
Chain Length:315
Number of Molecules:1
Biological Source:HOMO SAPIENS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HISTONE H3 DIMETHYL-LYSINE 4
Chain IDs:B (auth: P)
Chain Length:5
Number of Molecules:1
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MLY B LYS N-DIMETHYL-LYSINE
Primary Citation
Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol. 13 704 ? (2006)
PMID: 16829959 DOI: 10.1038/NSMB1119

Abstact

WDR5 is a core component of SET1-family complexes that achieve transcriptional activation via methylation of histone H3 on Nzeta of Lys4 (H3K4). The role of WDR5 in the MLL1 complex has recently been described as specific recognition of dimethyl-K4 in the context of a histone H3 amino terminus; WDR5 is essential for vertebrate development, Hox gene activation and global H3K4 trimethylation. We report the high-resolution X-ray structures of WDR5 in the unliganded form and complexed with histone H3 peptides having unmodified and mono-, di- and trimethylated K4, which together provide the first comprehensive analysis of methylated histone recognition by the ubiquitous WD40-repeat fold. Contrary to predictions, the structures reveal that WDR5 does not read out the methylation state of K4 directly, but instead serves to present the K4 side chain for further methylation by SET1-family complexes.

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Primary Citation of related structures
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