1N9Z image
Deposition Date 2002-11-26
Release Date 2003-05-20
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1N9Z
Keywords:
Title:
INTEGRIN ALPHA M I DOMAIN MUTANT
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 43
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin alpha-M
Gene (Uniprot):ITGAM
Mutagens:C128A D132C K315C
Chain IDs:A
Chain Length:192
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Engineered allosteric mutants of the integrin alphaMbeta2 I domain: structural and functional studies
Biochem.J. 372 121 127 (2003)
PMID: 12611591 DOI: 10.1042/BJ20021273

Abstact

The alpha-I domain, found in the alpha-subunit of the leucocyte integrins such as alphaMbeta2 and alphaLbeta2, switches between the open and closed tertiary conformations, reflecting the high- and low-affinity ligand-binding states of the integrin that are required for regulated cell adhesion and migration. In the present study we show, by using point mutations and engineered disulphide bonds, that ligand affinity can be reduced or increased allosterically by altering the equilibrium between the closed and open states. We determined equilibrium constants for the binding of two ligands, fibrinogen and intercellular cell-adhesion molecule 1, to the alphaM-I domain by surface plasmon resonance, and determined crystal structures of a low-affinity mutant. Locking the domain in the open conformation increases affinity by a factor of no greater than 10, consistent with a closely balanced equilibrium between the two conformations in the absence of ligand. This behaviour contrasts with that of the unliganded alphaL-I domain, for which the equilibrium lies strongly in favour of the closed conformation. These results suggest significant differences in the way the parent integrins regulate I domain conformation and hence ligand affinity.

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Primary Citation of related structures