Structural Complex
Chemical ID: U3J
IUPAC Name: xanthosine diphosphate
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]c(=O)c2ncn([C@H]3CCCO3)c2[nH]1
InChI: InChI=1S/C9H10N4O3/c14-8-6-7(11-9(15)12-8)13(4-10-6)5-2-1-3-16-5/h4-5H,1-3H2,(H2,11,12,14,15)/t5-/m1/s1
InChI Key: OQOJIIPEEFHULF-RXMQYKEDSA-N
Physiochemical Descriptor:
Formula: C10 H14 N4 O12 P2
Molecular weight: 444.185
Hydrogen Bond Acceptor: 14
Hydrogen Bond Donor: 7
Rotatable Bonds: 11
Heavy Atoms: 28
Systematic name
Program Version Descriptor
ACDLabs 12.01 9-{5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-beta-D-lyxofuranosyl}-3,9-dihydro-1H-purine-2,6-dione
OpenEye OEToolkits 2.0.7 [(2~{R},3~{R},4~{S},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 N1C(=O)c2ncn(c2NC1=O)C3C(O)C(C(COP(O)(=O)OP(=O)(O)O)O3)O
InChI InChI 1.03 InChI=1S/C10H14N4O12P2/c15-5-3(1-24-28(22,23)26-27(19,20)21)25-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H,22,23)(H2,19,20,21)(H2,12,13,17,18)/t3-,5+,6+,9-/m1/s1
InChIKey InChI 1.03 YMOPVQQBWLGDOD-GFRUICAKSA-N
SMILES_CANONICAL CACTVS 3.385 O[C@@H]1[C@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)n2cnc3C(=O)NC(=O)Nc23
SMILES CACTVS 3.385 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)n2cnc3C(=O)NC(=O)Nc23
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1nc2c(n1[C@H]3[C@H]([C@H]([C@H](O3)COP(=O)(O)OP(=O)(O)O)O)O)NC(=O)NC2=O
SMILES OpenEye OEToolkits 2.0.7 c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)NC(=O)NC2=O
Chemical Database Mapping
Database Reference ID
PubChem 154573934