Structural Complex
Chemical ID: TXS
IUPAC Name: 1-(2,5-dideoxy-5-pyrrolidin-1-yl-beta-L-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@@H]2CC[C@H](CN3CCCC3)O2)c(=O)[nH]1
InChI: InChI=1S/C13H19N3O3/c17-11-5-8-16(13(18)14-11)12-4-3-10(19-12)9-15-6-1-2-7-15/h5,8,10,12H,1-4,6-7,9H2,(H,14,17,18)/t10-,12+/m1/s1
InChI Key: XNWGTRJIDKQINJ-PWSUYJOCSA-N
Physiochemical Descriptor:
Formula: C14 H21 N3 O4
Molecular weight: 295.334
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 2
Rotatable Bonds: 5
Heavy Atoms: 21
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-(2,5-dideoxy-5-pyrrolidin-1-yl-beta-L-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione
OpenEye OEToolkits 1.5.0 1-[(2S,4R,5S)-4-hydroxy-5-(pyrrolidin-1-ylmethyl)oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NC(=O)N(C=C1C)C2OC(C(O)C2)CN3CCCC3
SMILES_CANONICAL CACTVS 3.341 CC1=CN([C@@H]2C[C@@H](O)[C@H](CN3CCCC3)O2)C(=O)NC1=O
SMILES CACTVS 3.341 CC1=CN([CH]2C[CH](O)[CH](CN3CCCC3)O2)C(=O)NC1=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CC1=CN(C(=O)NC1=O)[C@@H]2C[C@H]([C@@H](O2)CN3CCCC3)O
SMILES OpenEye OEToolkits 1.5.0 CC1=CN(C(=O)NC1=O)C2CC(C(O2)CN3CCCC3)O
InChI InChI 1.03 InChI=1S/C14H21N3O4/c1-9-7-17(14(20)15-13(9)19)12-6-10(18)11(21-12)8-16-4-2-3-5-16/h7,10-12,18H,2-6,8H2,1H3,(H,15,19,20)/t10-,11+,12+/m1/s1
InChIKey InChI 1.03 XUSBTLVYPZUOAW-WOPDTQHZSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB08661
PubChem 25147495
ZINC ZINC000053683282