Structural Complex
Chemical ID: URD
IUPAC Name: 1-((2R,3R,4S,5R)-TETRAHYDRO-3,4-DIHYDROXY-5-(HYDROXYMETHYL)FURAN-2-YL)PYRIDINE-2,4(1H,3H)-DIONE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1C=CN([C@H]2CCCO2)C(=O)C1
InChI: InChI=1S/C9H11NO3/c11-7-3-4-10(8(12)6-7)9-2-1-5-13-9/h3-4,9H,1-2,5-6H2/t9-/m1/s1
InChI Key: VFYFCHYTHHLSJG-SECBINFHSA-N
Physiochemical Descriptor:
Formula: C10 H13 N O6
Molecular weight: 243.213
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 17
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-beta-D-ribofuranosylpyridine-2,4(1H,3H)-dione
OpenEye OEToolkits 1.5.0 1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridine-2,4-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1C=CN(C(=O)C1)C2OC(C(O)C2O)CO
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=O)CC2=O
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=O)CC2=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1C(=O)C=CN(C1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
SMILES OpenEye OEToolkits 1.5.0 C1C(=O)C=CN(C1=O)C2C(C(C(O2)CO)O)O
InChI InChI 1.03 InChI=1S/C10H13NO6/c12-4-6-8(15)9(16)10(17-6)11-2-1-5(13)3-7(11)14/h1-2,6,8-10,12,15-16H,3-4H2/t6-,8-,9-,10-/m1/s1
InChIKey InChI 1.03 WIRVQQCUKDPURA-PEBGCTIMSA-N
Chemical Database Mapping
Database Reference ID
PubChem 3000824