ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: 801

IUPAC Name: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}PYRIDIN-3-OLATE

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: c1ccc(-c2nc3ccccc3[nH]2)nc1

InChI: InChI=1S/C12H9N3/c1-2-6-10-9(5-1)14-12(15-10)11-7-3-4-8-13-11/h1-8H,(H,14,15)

InChI Key: YNFBMDWHEHETJW-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C13 H11 N5 O

Molecular weight: 253.259

Hydrogen Bond Acceptor: 3

Hydrogen Bond Donor: 3

Rotatable Bonds: 2

Heavy Atoms: 19

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	2-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}pyridin-3-olate
OpenEye OEToolkits	1.5.0	2-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]pyridin-3-olate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	[O-]c3cccnc3c2nc1cc(ccc1n2)\C(=[NH2+])N
SMILES_CANONICAL	CACTVS	3.341	NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3ncccc3[O-]
SMILES	CACTVS	3.341	NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3ncccc3[O-]
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	c1cc(c(nc1)c2[nH]c3ccc(cc3n2)C(=[NH2+])N)[O-]
SMILES	OpenEye OEToolkits	1.5.0	c1cc(c(nc1)c2[nH]c3ccc(cc3n2)C(=[NH2+])N)[O-]
InChI	InChI	1.03	InChI=1S/C13H11N5O/c14-12(15)7-3-4-8-9(6-7)18-13(17-8)11-10(19)2-1-5-16-11/h1-6,19H,(H3,14,15)(H,17,18)
InChIKey	InChI	1.03	FQCDQFDJHSXQKY-UHFFFAOYSA-N

Chemical Database Mapping