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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
1YO4
pdb_00001yo4
10.2210/pdb1yo4/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
3D_13C-separated_NOESY
0.4mM ORF7a Protein U-15N,13C; 1mM Sodium Acetate (deuterated), 93% H2O, 7% D2O
1mM sodium acetate
93% H2O/7% D2O
5
ambient
315
2
3D_15N-separated_NOESY
0.4mM ORF7a Protein U-15N,13C; 1mM Sodium Acetate (deuterated), 93% H2O, 7% D2O
1mM sodium acetate
93% H2O/7% D2O
5
ambient
315
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
molecular dynamics simulated annealing
?
1
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
100
Conformers Submitted Total Number
10
Representative Model
8 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
6.1D
VNMR
n.a.
2
processing
n.a.
NMRPipe
Delaglio, F.
3
data analysis
1.1.5
CARA
Keller, R.
4
structure solution
1.2
ARIA
Nilges, M.
5
structure solution
1.1
CNS
Brunger, A.T.
6
refinement
1.1
CNS
Brunger, A.T.