data_9KKZ # _entry.id 9KKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KKZ pdb_00009kkz 10.2210/pdb9kkz/pdb WWPDB D_1300053766 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-02-19 ? 2 'Structure model' 1 1 2025-03-12 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9KKZ _pdbx_database_status.recvd_initial_deposition_date 2024-11-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 9K7R unspecified PDB . 9K8Z unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email j.kondo@sophia.ac.jp _pdbx_contact_author.name_first Jiro _pdbx_contact_author.name_last Kondo _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5682-3685 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kondo, J.' 1 0000-0002-5682-3685 'Ando, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 81 _citation.language ? _citation.page_first 95 _citation.page_last 100 _citation.title 'The first report of structural analysis of a nucleic acid using crystals grown in space.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X25000810 _citation.pdbx_database_id_PubMed 39937045 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ando, S.' 1 ? primary 'Takahashi, M.' 2 ? primary 'Kondo, J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3') ; 2981.895 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*(5CM)P*TP*CP*TP*TP*CP*TP*TP*(5CM))-3') ; 2660.788 1 ? ? ? ? 3 non-polymer syn SPERMINE 202.340 1 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAAGAAGAG GAAGAAGAG A ? 2 polydeoxyribonucleotide no yes '(5CM)(DT)(DC)(DT)(DT)(DC)(DT)(DT)(5CM)' CTCTTCTTC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 SPERMINE SPM 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 A n 1 4 G n 1 5 A n 1 6 A n 1 7 G n 1 8 A n 1 9 G n 2 1 5CM n 2 2 DT n 2 3 DC n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DT n 2 8 DT n 2 9 5CM n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 SPM non-polymer . SPERMINE ? 'C10 H26 N4' 202.340 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 A 2 2 2 A A A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 G 9 9 9 G G A . n B 2 1 5CM 1 1 1 5CM 5CM B . n B 2 2 DT 2 2 2 DT DT B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 5CM 9 9 9 5CM 5CM B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SPM 1 101 101 SPM SPM A . D 4 HOH 1 201 65 HOH HOH A . D 4 HOH 2 202 57 HOH HOH A . D 4 HOH 3 203 5 HOH HOH A . D 4 HOH 4 204 26 HOH HOH A . D 4 HOH 5 205 31 HOH HOH A . D 4 HOH 6 206 12 HOH HOH A . D 4 HOH 7 207 37 HOH HOH A . D 4 HOH 8 208 24 HOH HOH A . D 4 HOH 9 209 35 HOH HOH A . D 4 HOH 10 210 53 HOH HOH A . D 4 HOH 11 211 4 HOH HOH A . D 4 HOH 12 212 40 HOH HOH A . D 4 HOH 13 213 3 HOH HOH A . D 4 HOH 14 214 58 HOH HOH A . D 4 HOH 15 215 14 HOH HOH A . D 4 HOH 16 216 2 HOH HOH A . D 4 HOH 17 217 44 HOH HOH A . D 4 HOH 18 218 43 HOH HOH A . D 4 HOH 19 219 34 HOH HOH A . D 4 HOH 20 220 33 HOH HOH A . D 4 HOH 21 221 50 HOH HOH A . D 4 HOH 22 222 27 HOH HOH A . D 4 HOH 23 223 39 HOH HOH A . D 4 HOH 24 224 48 HOH HOH A . D 4 HOH 25 225 66 HOH HOH A . D 4 HOH 26 226 61 HOH HOH A . D 4 HOH 27 227 47 HOH HOH A . D 4 HOH 28 228 54 HOH HOH A . E 4 HOH 1 101 19 HOH HOH B . E 4 HOH 2 102 60 HOH HOH B . E 4 HOH 3 103 11 HOH HOH B . E 4 HOH 4 104 38 HOH HOH B . E 4 HOH 5 105 59 HOH HOH B . E 4 HOH 6 106 1 HOH HOH B . E 4 HOH 7 107 6 HOH HOH B . E 4 HOH 8 108 55 HOH HOH B . E 4 HOH 9 109 13 HOH HOH B . E 4 HOH 10 110 20 HOH HOH B . E 4 HOH 11 111 36 HOH HOH B . E 4 HOH 12 112 21 HOH HOH B . E 4 HOH 13 113 17 HOH HOH B . E 4 HOH 14 114 7 HOH HOH B . E 4 HOH 15 115 18 HOH HOH B . E 4 HOH 16 116 28 HOH HOH B . E 4 HOH 17 117 16 HOH HOH B . E 4 HOH 18 118 15 HOH HOH B . E 4 HOH 19 119 64 HOH HOH B . E 4 HOH 20 120 23 HOH HOH B . E 4 HOH 21 121 42 HOH HOH B . E 4 HOH 22 122 10 HOH HOH B . E 4 HOH 23 123 30 HOH HOH B . E 4 HOH 24 124 22 HOH HOH B . E 4 HOH 25 125 8 HOH HOH B . E 4 HOH 26 126 25 HOH HOH B . E 4 HOH 27 127 41 HOH HOH B . E 4 HOH 28 128 29 HOH HOH B . E 4 HOH 29 129 63 HOH HOH B . E 4 HOH 30 130 32 HOH HOH B . E 4 HOH 31 131 62 HOH HOH B . E 4 HOH 32 132 46 HOH HOH B . E 4 HOH 33 133 49 HOH HOH B . E 4 HOH 34 134 56 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 9KKZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.843 _cell.length_a_esd ? _cell.length_b 48.843 _cell.length_b_esd ? _cell.length_c 45.761 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KKZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KKZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method COUNTER-DIFFUSION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium chloride, MPD, spermine 4HCl, MES' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-12-11 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9KKZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.5 _reflns.d_resolution_low 31.1 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10053 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.78 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.029 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.026 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.50 1.6 ? ? ? ? ? ? 1766 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.256 ? ? 1 1 0.971 ? ? ? ? 0.23 ? ? ? ? ? ? ? ? ? 1.60 1.7 ? ? ? ? ? ? 1356 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.123 ? ? 2 1 0.994 ? ? ? ? 0.11 ? ? ? ? ? ? ? ? ? 1.70 1.8 ? ? ? ? ? ? 1092 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.081 ? ? 3 1 0.996 ? ? ? ? 0.073 ? ? ? ? ? ? ? ? ? 1.80 1.9 ? ? ? ? ? ? 849 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.065 ? ? 4 1 0.997 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? ? 1.90 2.0 ? ? ? ? ? ? 702 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.052 ? ? 5 1 0.997 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? ? 2.00 3.0 ? ? ? ? ? ? 2976 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.034 ? ? 6 1 0.999 ? ? ? ? 0.03 ? ? ? ? ? ? ? ? ? 3.00 4.0 ? ? ? ? ? ? 731 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.026 ? ? 7 1 0.999 ? ? ? ? 0.024 ? ? ? ? ? ? ? ? ? 4.00 5.0 ? ? ? ? ? ? 258 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.026 ? ? 8 1 0.999 ? ? ? ? 0.023 ? ? ? ? ? ? ? ? ? 5.00 31.1 ? ? ? ? ? ? 282 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.024 ? ? 9 1 0.999 ? ? ? ? 0.021 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9KKZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.50 _refine.ls_d_res_low 31.06 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10053 _refine.ls_number_reflns_R_free 1020 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.85 _refine.ls_percent_reflns_R_free 10.15 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1946 _refine.ls_R_factor_R_free 0.2112 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1927 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.42 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.40 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.17 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 374 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 450 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 31.06 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.056 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.223 ? 189 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.041 ? 78 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 18 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.50 1.58 . . 148 1303 100.00 . . . . 0.2489 . . . . . . . . . . . 0.2580 'X-RAY DIFFRACTION' 1.58 1.68 . . 139 1276 100.00 . . . . 0.2228 . . . . . . . . . . . 0.2842 'X-RAY DIFFRACTION' 1.68 1.81 . . 149 1291 100.00 . . . . 0.2153 . . . . . . . . . . . 0.2489 'X-RAY DIFFRACTION' 1.81 1.99 . . 142 1270 100.00 . . . . 0.2230 . . . . . . . . . . . 0.2727 'X-RAY DIFFRACTION' 1.99 2.27 . . 147 1286 100.00 . . . . 0.2458 . . . . . . . . . . . 0.2553 'X-RAY DIFFRACTION' 2.27 2.86 . . 144 1297 100.00 . . . . 0.2275 . . . . . . . . . . . 0.2463 'X-RAY DIFFRACTION' 2.87 31.06 . . 151 1310 99.00 . . . . 0.1560 . . . . . . . . . . . 0.1701 # _struct.entry_id 9KKZ _struct.title 'Crystal structure of DNA/RNA duplex obtained using the counter diffusion method on Earth (Na form)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KKZ _struct_keywords.text 'counter diffusion method, DNA-RNA complex' _struct_keywords.pdbx_keywords DNA/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9KKZ 9KKZ ? 1 ? 1 2 PDB 9KKZ 9KKZ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9KKZ A 1 ? 9 ? 9KKZ 1 ? 9 ? 1 9 2 2 9KKZ B 1 ? 9 ? 9KKZ 1 ? 9 ? 1 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1720 ? 1 MORE 1 ? 1 'SSA (A^2)' 3490 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B 5CM 1 "O3'" ? ? ? 1_555 B DT 2 P ? ? B 5CM 1 B DT 2 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale2 covale both ? B DT 8 "O3'" ? ? ? 1_555 B 5CM 9 P ? ? B DT 8 B 5CM 9 1_555 ? ? ? ? ? ? ? 1.612 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B 5CM 9 N3 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B 5CM 9 O2 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B 5CM 9 N4 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B DT 8 N3 ? ? A A 2 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B DT 8 O4 ? ? A A 2 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 B DT 7 N3 ? ? A A 3 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 B DT 7 O4 ? ? A A 3 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 B DC 6 N3 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 B DC 6 O2 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 B DC 6 N4 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 5 N1 ? ? ? 1_555 B DT 5 N3 ? ? A A 5 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N6 ? ? ? 1_555 B DT 5 O4 ? ? A A 5 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 B DT 4 N3 ? ? A A 6 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 B DT 4 O4 ? ? A A 6 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 B DC 3 N3 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 B DC 3 O2 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 B DC 3 N4 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 8 N1 ? ? ? 1_555 B DT 2 N3 ? ? A A 8 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 8 N6 ? ? ? 1_555 B DT 2 O4 ? ? A A 8 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 9 N1 ? ? ? 1_555 B 5CM 1 N3 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N2 ? ? ? 1_555 B 5CM 1 O2 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 O6 ? ? ? 1_555 B 5CM 1 N4 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_entry_details.entry_id 9KKZ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 A OP3 O N N 38 A P P N N 39 A OP1 O N N 40 A OP2 O N N 41 A "O5'" O N N 42 A "C5'" C N N 43 A "C4'" C N R 44 A "O4'" O N N 45 A "C3'" C N S 46 A "O3'" O N N 47 A "C2'" C N R 48 A "O2'" O N N 49 A "C1'" C N R 50 A N9 N Y N 51 A C8 C Y N 52 A N7 N Y N 53 A C5 C Y N 54 A C6 C Y N 55 A N6 N N N 56 A N1 N Y N 57 A C2 C Y N 58 A N3 N Y N 59 A C4 C Y N 60 A HOP3 H N N 61 A HOP2 H N N 62 A "H5'" H N N 63 A "H5''" H N N 64 A "H4'" H N N 65 A "H3'" H N N 66 A "HO3'" H N N 67 A "H2'" H N N 68 A "HO2'" H N N 69 A "H1'" H N N 70 A H8 H N N 71 A H61 H N N 72 A H62 H N N 73 A H2 H N N 74 DC OP3 O N N 75 DC P P N N 76 DC OP1 O N N 77 DC OP2 O N N 78 DC "O5'" O N N 79 DC "C5'" C N N 80 DC "C4'" C N R 81 DC "O4'" O N N 82 DC "C3'" C N S 83 DC "O3'" O N N 84 DC "C2'" C N N 85 DC "C1'" C N R 86 DC N1 N N N 87 DC C2 C N N 88 DC O2 O N N 89 DC N3 N N N 90 DC C4 C N N 91 DC N4 N N N 92 DC C5 C N N 93 DC C6 C N N 94 DC HOP3 H N N 95 DC HOP2 H N N 96 DC "H5'" H N N 97 DC "H5''" H N N 98 DC "H4'" H N N 99 DC "H3'" H N N 100 DC "HO3'" H N N 101 DC "H2'" H N N 102 DC "H2''" H N N 103 DC "H1'" H N N 104 DC H41 H N N 105 DC H42 H N N 106 DC H5 H N N 107 DC H6 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 G OP3 O N N 145 G P P N N 146 G OP1 O N N 147 G OP2 O N N 148 G "O5'" O N N 149 G "C5'" C N N 150 G "C4'" C N R 151 G "O4'" O N N 152 G "C3'" C N S 153 G "O3'" O N N 154 G "C2'" C N R 155 G "O2'" O N N 156 G "C1'" C N R 157 G N9 N Y N 158 G C8 C Y N 159 G N7 N Y N 160 G C5 C Y N 161 G C6 C N N 162 G O6 O N N 163 G N1 N N N 164 G C2 C N N 165 G N2 N N N 166 G N3 N N N 167 G C4 C Y N 168 G HOP3 H N N 169 G HOP2 H N N 170 G "H5'" H N N 171 G "H5''" H N N 172 G "H4'" H N N 173 G "H3'" H N N 174 G "HO3'" H N N 175 G "H2'" H N N 176 G "HO2'" H N N 177 G "H1'" H N N 178 G H8 H N N 179 G H1 H N N 180 G H21 H N N 181 G H22 H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 SPM N1 N N N 186 SPM C2 C N N 187 SPM C3 C N N 188 SPM C4 C N N 189 SPM N5 N N N 190 SPM C6 C N N 191 SPM C7 C N N 192 SPM C8 C N N 193 SPM C9 C N N 194 SPM N10 N N N 195 SPM C11 C N N 196 SPM C12 C N N 197 SPM C13 C N N 198 SPM N14 N N N 199 SPM HN11 H N N 200 SPM HN12 H N N 201 SPM H21 H N N 202 SPM H22 H N N 203 SPM H31 H N N 204 SPM H32 H N N 205 SPM H41 H N N 206 SPM H42 H N N 207 SPM HN5 H N N 208 SPM H61 H N N 209 SPM H62 H N N 210 SPM H71 H N N 211 SPM H72 H N N 212 SPM H81 H N N 213 SPM H82 H N N 214 SPM H91 H N N 215 SPM H92 H N N 216 SPM HN0 H N N 217 SPM H111 H N N 218 SPM H112 H N N 219 SPM H121 H N N 220 SPM H122 H N N 221 SPM H131 H N N 222 SPM H132 H N N 223 SPM HN41 H N N 224 SPM HN42 H N N 225 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 A OP3 P sing N N 39 A OP3 HOP3 sing N N 40 A P OP1 doub N N 41 A P OP2 sing N N 42 A P "O5'" sing N N 43 A OP2 HOP2 sing N N 44 A "O5'" "C5'" sing N N 45 A "C5'" "C4'" sing N N 46 A "C5'" "H5'" sing N N 47 A "C5'" "H5''" sing N N 48 A "C4'" "O4'" sing N N 49 A "C4'" "C3'" sing N N 50 A "C4'" "H4'" sing N N 51 A "O4'" "C1'" sing N N 52 A "C3'" "O3'" sing N N 53 A "C3'" "C2'" sing N N 54 A "C3'" "H3'" sing N N 55 A "O3'" "HO3'" sing N N 56 A "C2'" "O2'" sing N N 57 A "C2'" "C1'" sing N N 58 A "C2'" "H2'" sing N N 59 A "O2'" "HO2'" sing N N 60 A "C1'" N9 sing N N 61 A "C1'" "H1'" sing N N 62 A N9 C8 sing Y N 63 A N9 C4 sing Y N 64 A C8 N7 doub Y N 65 A C8 H8 sing N N 66 A N7 C5 sing Y N 67 A C5 C6 sing Y N 68 A C5 C4 doub Y N 69 A C6 N6 sing N N 70 A C6 N1 doub Y N 71 A N6 H61 sing N N 72 A N6 H62 sing N N 73 A N1 C2 sing Y N 74 A C2 N3 doub Y N 75 A C2 H2 sing N N 76 A N3 C4 sing Y N 77 DC OP3 P sing N N 78 DC OP3 HOP3 sing N N 79 DC P OP1 doub N N 80 DC P OP2 sing N N 81 DC P "O5'" sing N N 82 DC OP2 HOP2 sing N N 83 DC "O5'" "C5'" sing N N 84 DC "C5'" "C4'" sing N N 85 DC "C5'" "H5'" sing N N 86 DC "C5'" "H5''" sing N N 87 DC "C4'" "O4'" sing N N 88 DC "C4'" "C3'" sing N N 89 DC "C4'" "H4'" sing N N 90 DC "O4'" "C1'" sing N N 91 DC "C3'" "O3'" sing N N 92 DC "C3'" "C2'" sing N N 93 DC "C3'" "H3'" sing N N 94 DC "O3'" "HO3'" sing N N 95 DC "C2'" "C1'" sing N N 96 DC "C2'" "H2'" sing N N 97 DC "C2'" "H2''" sing N N 98 DC "C1'" N1 sing N N 99 DC "C1'" "H1'" sing N N 100 DC N1 C2 sing N N 101 DC N1 C6 sing N N 102 DC C2 O2 doub N N 103 DC C2 N3 sing N N 104 DC N3 C4 doub N N 105 DC C4 N4 sing N N 106 DC C4 C5 sing N N 107 DC N4 H41 sing N N 108 DC N4 H42 sing N N 109 DC C5 C6 doub N N 110 DC C5 H5 sing N N 111 DC C6 H6 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 G OP3 P sing N N 150 G OP3 HOP3 sing N N 151 G P OP1 doub N N 152 G P OP2 sing N N 153 G P "O5'" sing N N 154 G OP2 HOP2 sing N N 155 G "O5'" "C5'" sing N N 156 G "C5'" "C4'" sing N N 157 G "C5'" "H5'" sing N N 158 G "C5'" "H5''" sing N N 159 G "C4'" "O4'" sing N N 160 G "C4'" "C3'" sing N N 161 G "C4'" "H4'" sing N N 162 G "O4'" "C1'" sing N N 163 G "C3'" "O3'" sing N N 164 G "C3'" "C2'" sing N N 165 G "C3'" "H3'" sing N N 166 G "O3'" "HO3'" sing N N 167 G "C2'" "O2'" sing N N 168 G "C2'" "C1'" sing N N 169 G "C2'" "H2'" sing N N 170 G "O2'" "HO2'" sing N N 171 G "C1'" N9 sing N N 172 G "C1'" "H1'" sing N N 173 G N9 C8 sing Y N 174 G N9 C4 sing Y N 175 G C8 N7 doub Y N 176 G C8 H8 sing N N 177 G N7 C5 sing Y N 178 G C5 C6 sing N N 179 G C5 C4 doub Y N 180 G C6 O6 doub N N 181 G C6 N1 sing N N 182 G N1 C2 sing N N 183 G N1 H1 sing N N 184 G C2 N2 sing N N 185 G C2 N3 doub N N 186 G N2 H21 sing N N 187 G N2 H22 sing N N 188 G N3 C4 sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 SPM N1 C2 sing N N 192 SPM N1 HN11 sing N N 193 SPM N1 HN12 sing N N 194 SPM C2 C3 sing N N 195 SPM C2 H21 sing N N 196 SPM C2 H22 sing N N 197 SPM C3 C4 sing N N 198 SPM C3 H31 sing N N 199 SPM C3 H32 sing N N 200 SPM C4 N5 sing N N 201 SPM C4 H41 sing N N 202 SPM C4 H42 sing N N 203 SPM N5 C6 sing N N 204 SPM N5 HN5 sing N N 205 SPM C6 C7 sing N N 206 SPM C6 H61 sing N N 207 SPM C6 H62 sing N N 208 SPM C7 C8 sing N N 209 SPM C7 H71 sing N N 210 SPM C7 H72 sing N N 211 SPM C8 C9 sing N N 212 SPM C8 H81 sing N N 213 SPM C8 H82 sing N N 214 SPM C9 N10 sing N N 215 SPM C9 H91 sing N N 216 SPM C9 H92 sing N N 217 SPM N10 C11 sing N N 218 SPM N10 HN0 sing N N 219 SPM C11 C12 sing N N 220 SPM C11 H111 sing N N 221 SPM C11 H112 sing N N 222 SPM C12 C13 sing N N 223 SPM C12 H121 sing N N 224 SPM C12 H122 sing N N 225 SPM C13 N14 sing N N 226 SPM C13 H131 sing N N 227 SPM C13 H132 sing N N 228 SPM N14 HN41 sing N N 229 SPM N14 HN42 sing N N 230 # _ndb_struct_conf_na.entry_id 9KKZ _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B 5CM 9 1_555 -0.341 -0.141 -0.150 -8.108 -12.609 -0.043 1 A_G1:5CM9_B A 1 ? B 9 ? 19 1 1 A A 2 1_555 B DT 8 1_555 0.122 -0.111 -0.029 -4.965 -15.014 3.114 2 A_A2:DT8_B A 2 ? B 8 ? 20 1 1 A A 3 1_555 B DT 7 1_555 -0.042 -0.112 -0.014 -5.858 -19.549 7.024 3 A_A3:DT7_B A 3 ? B 7 ? 20 1 1 A G 4 1_555 B DC 6 1_555 -0.231 -0.180 -0.207 -12.278 -9.754 -2.571 4 A_G4:DC6_B A 4 ? B 6 ? 19 1 1 A A 5 1_555 B DT 5 1_555 0.149 -0.042 -0.302 -13.940 -5.748 -3.790 5 A_A5:DT5_B A 5 ? B 5 ? 20 1 1 A A 6 1_555 B DT 4 1_555 -0.030 -0.242 0.177 0.376 -6.024 2.663 6 A_A6:DT4_B A 6 ? B 4 ? 20 1 1 A G 7 1_555 B DC 3 1_555 -0.214 -0.019 0.082 -1.961 -12.435 1.947 7 A_G7:DC3_B A 7 ? B 3 ? 19 1 1 A A 8 1_555 B DT 2 1_555 0.006 -0.148 -0.035 -0.311 -3.348 -1.647 8 A_A8:DT2_B A 8 ? B 2 ? 20 1 1 A G 9 1_555 B 5CM 1 1_555 -0.184 -0.107 0.021 7.614 1.850 0.316 9 A_G9:5CM1_B A 9 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B 5CM 9 1_555 A A 2 1_555 B DT 8 1_555 0.500 -1.200 3.217 0.569 2.248 36.758 -2.197 -0.716 3.148 3.561 -0.902 36.828 1 AA_G1A2:DT85CM9_BB A 1 ? B 9 ? A 2 ? B 8 ? 1 A A 2 1_555 B DT 8 1_555 A A 3 1_555 B DT 7 1_555 0.426 -1.248 3.308 1.170 3.782 31.675 -2.951 -0.564 3.155 6.895 -2.132 31.915 2 AA_A2A3:DT7DT8_BB A 2 ? B 8 ? A 3 ? B 7 ? 1 A A 3 1_555 B DT 7 1_555 A G 4 1_555 B DC 6 1_555 -1.359 -1.295 3.350 -3.414 12.058 35.851 -3.511 1.662 2.895 18.892 5.348 37.910 3 AA_A3G4:DC6DT7_BB A 3 ? B 7 ? A 4 ? B 6 ? 1 A G 4 1_555 B DC 6 1_555 A A 5 1_555 B DT 5 1_555 0.856 -1.784 3.438 4.610 13.348 30.700 -5.166 -0.754 2.563 23.701 -8.185 33.721 4 AA_G4A5:DT5DC6_BB A 4 ? B 6 ? A 5 ? B 5 ? 1 A A 5 1_555 B DT 5 1_555 A A 6 1_555 B DT 4 1_555 0.714 -1.568 3.012 -1.351 1.285 25.070 -3.945 -2.000 2.888 2.955 3.106 25.138 5 AA_A5A6:DT4DT5_BB A 5 ? B 5 ? A 6 ? B 4 ? 1 A A 6 1_555 B DT 4 1_555 A G 7 1_555 B DC 3 1_555 0.277 -1.634 3.375 0.646 3.973 31.102 -3.773 -0.391 3.152 7.371 -1.198 31.355 6 AA_A6G7:DC3DT4_BB A 6 ? B 4 ? A 7 ? B 3 ? 1 A G 7 1_555 B DC 3 1_555 A A 8 1_555 B DT 2 1_555 -1.075 -1.499 3.193 -0.715 7.701 35.957 -3.358 1.613 2.843 12.299 1.141 36.752 7 AA_G7A8:DT2DC3_BB A 7 ? B 3 ? A 8 ? B 2 ? 1 A A 8 1_555 B DT 2 1_555 A G 9 1_555 B 5CM 1 1_555 0.762 -1.934 3.142 0.831 0.209 26.812 -4.221 -1.435 3.148 0.451 -1.792 26.826 8 AA_A8G9:5CM1DT2_BB A 8 ? B 2 ? A 9 ? B 1 ? # _pdbx_audit_support.funding_organization 'Japan Agency for Medical Research and Development (AMED)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP23ama121014 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4U6M _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9KKZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.020474 _atom_sites.fract_transf_matrix[1][2] 0.011821 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023641 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021853 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . G A 1 1 ? -16.698 -7.599 4.436 1.00 32.97 ? 1 G A "O5'" 1 ATOM 2 C "C5'" . G A 1 1 ? -17.958 -7.042 4.772 1.00 33.59 ? 1 G A "C5'" 1 ATOM 3 C "C4'" . G A 1 1 ? -18.902 -7.074 3.598 1.00 31.11 ? 1 G A "C4'" 1 ATOM 4 O "O4'" . G A 1 1 ? -18.423 -6.188 2.556 1.00 30.68 ? 1 G A "O4'" 1 ATOM 5 C "C3'" . G A 1 1 ? -19.050 -8.413 2.896 1.00 31.04 ? 1 G A "C3'" 1 ATOM 6 O "O3'" . G A 1 1 ? -19.930 -9.285 3.569 1.00 33.10 ? 1 G A "O3'" 1 ATOM 7 C "C2'" . G A 1 1 ? -19.537 -8.010 1.509 1.00 28.52 ? 1 G A "C2'" 1 ATOM 8 O "O2'" . G A 1 1 ? -20.930 -7.718 1.514 1.00 28.16 ? 1 G A "O2'" 1 ATOM 9 C "C1'" . G A 1 1 ? -18.766 -6.710 1.286 1.00 28.00 ? 1 G A "C1'" 1 ATOM 10 N N9 . G A 1 1 ? -17.528 -6.941 0.522 1.00 27.28 ? 1 G A N9 1 ATOM 11 C C8 . G A 1 1 ? -16.239 -6.868 0.988 1.00 27.22 ? 1 G A C8 1 ATOM 12 N N7 . G A 1 1 ? -15.345 -7.127 0.073 1.00 27.00 ? 1 G A N7 1 ATOM 13 C C5 . G A 1 1 ? -16.091 -7.382 -1.079 1.00 25.85 ? 1 G A C5 1 ATOM 14 C C6 . G A 1 1 ? -15.682 -7.721 -2.403 1.00 24.31 ? 1 G A C6 1 ATOM 15 O O6 . G A 1 1 ? -14.540 -7.867 -2.868 1.00 24.04 ? 1 G A O6 1 ATOM 16 N N1 . G A 1 1 ? -16.787 -7.890 -3.234 1.00 22.63 ? 1 G A N1 1 ATOM 17 C C2 . G A 1 1 ? -18.102 -7.760 -2.863 1.00 23.14 ? 1 G A C2 1 ATOM 18 N N2 . G A 1 1 ? -19.019 -7.961 -3.819 1.00 23.99 ? 1 G A N2 1 ATOM 19 N N3 . G A 1 1 ? -18.495 -7.447 -1.642 1.00 25.58 ? 1 G A N3 1 ATOM 20 C C4 . G A 1 1 ? -17.441 -7.273 -0.812 1.00 25.92 ? 1 G A C4 1 ATOM 21 P P . A A 1 2 ? -19.646 -10.859 3.583 1.00 31.31 ? 2 A A P 1 ATOM 22 O OP1 . A A 1 2 ? -20.644 -11.487 4.489 1.00 38.39 ? 2 A A OP1 1 ATOM 23 O OP2 . A A 1 2 ? -18.194 -11.065 3.805 1.00 30.02 ? 2 A A OP2 1 ATOM 24 O "O5'" . A A 1 2 ? -19.989 -11.316 2.096 1.00 28.35 ? 2 A A "O5'" 1 ATOM 25 C "C5'" . A A 1 2 ? -21.325 -11.249 1.621 1.00 27.55 ? 2 A A "C5'" 1 ATOM 26 C "C4'" . A A 1 2 ? -21.377 -11.392 0.124 1.00 27.15 ? 2 A A "C4'" 1 ATOM 27 O "O4'" . A A 1 2 ? -20.507 -10.408 -0.491 1.00 27.40 ? 2 A A "O4'" 1 ATOM 28 C "C3'" . A A 1 2 ? -20.878 -12.707 -0.438 1.00 24.01 ? 2 A A "C3'" 1 ATOM 29 O "O3'" . A A 1 2 ? -21.836 -13.737 -0.354 1.00 28.36 ? 2 A A "O3'" 1 ATOM 30 C "C2'" . A A 1 2 ? -20.553 -12.331 -1.870 1.00 24.67 ? 2 A A "C2'" 1 ATOM 31 O "O2'" . A A 1 2 ? -21.759 -12.193 -2.605 1.00 29.11 ? 2 A A "O2'" 1 ATOM 32 C "C1'" . A A 1 2 ? -19.965 -10.938 -1.683 1.00 23.85 ? 2 A A "C1'" 1 ATOM 33 N N9 . A A 1 2 ? -18.496 -10.946 -1.568 1.00 22.34 ? 2 A A N9 1 ATOM 34 C C8 . A A 1 2 ? -17.743 -10.801 -0.427 1.00 25.47 ? 2 A A C8 1 ATOM 35 N N7 . A A 1 2 ? -16.452 -10.838 -0.630 1.00 22.71 ? 2 A A N7 1 ATOM 36 C C5 . A A 1 2 ? -16.334 -11.017 -2.006 1.00 21.07 ? 2 A A C5 1 ATOM 37 C C6 . A A 1 2 ? -15.212 -11.137 -2.844 1.00 21.07 ? 2 A A C6 1 ATOM 38 N N6 . A A 1 2 ? -13.950 -11.085 -2.422 1.00 22.86 ? 2 A A N6 1 ATOM 39 N N1 . A A 1 2 ? -15.439 -11.313 -4.167 1.00 19.21 ? 2 A A N1 1 ATOM 40 C C2 . A A 1 2 ? -16.704 -11.357 -4.580 1.00 21.72 ? 2 A A C2 1 ATOM 41 N N3 . A A 1 2 ? -17.838 -11.254 -3.897 1.00 21.59 ? 2 A A N3 1 ATOM 42 C C4 . A A 1 2 ? -17.585 -11.093 -2.590 1.00 22.44 ? 2 A A C4 1 ATOM 43 P P . A A 1 3 ? -21.370 -15.274 -0.268 1.00 27.50 ? 3 A A P 1 ATOM 44 O OP1 . A A 1 3 ? -22.609 -16.075 -0.080 1.00 33.99 ? 3 A A OP1 1 ATOM 45 O OP2 . A A 1 3 ? -20.268 -15.378 0.720 1.00 30.33 ? 3 A A OP2 1 ATOM 46 O "O5'" . A A 1 3 ? -20.775 -15.610 -1.713 1.00 25.53 ? 3 A A "O5'" 1 ATOM 47 C "C5'" . A A 1 3 ? -21.598 -15.621 -2.870 1.00 25.18 ? 3 A A "C5'" 1 ATOM 48 C "C4'" . A A 1 3 ? -20.769 -15.653 -4.130 1.00 25.45 ? 3 A A "C4'" 1 ATOM 49 O "O4'" . A A 1 3 ? -19.855 -14.524 -4.145 1.00 25.06 ? 3 A A "O4'" 1 ATOM 50 C "C3'" . A A 1 3 ? -19.858 -16.859 -4.310 1.00 25.59 ? 3 A A "C3'" 1 ATOM 51 O "O3'" . A A 1 3 ? -20.524 -18.005 -4.803 1.00 26.93 ? 3 A A "O3'" 1 ATOM 52 C "C2'" . A A 1 3 ? -18.810 -16.336 -5.275 1.00 25.06 ? 3 A A "C2'" 1 ATOM 53 O "O2'" . A A 1 3 ? -19.321 -16.325 -6.602 1.00 26.73 ? 3 A A "O2'" 1 ATOM 54 C "C1'" . A A 1 3 ? -18.655 -14.895 -4.797 1.00 23.08 ? 3 A A "C1'" 1 ATOM 55 N N9 . A A 1 3 ? -17.541 -14.752 -3.844 1.00 21.47 ? 3 A A N9 1 ATOM 56 C C8 . A A 1 3 ? -17.561 -14.646 -2.479 1.00 24.12 ? 3 A A C8 1 ATOM 57 N N7 . A A 1 3 ? -16.368 -14.525 -1.947 1.00 22.59 ? 3 A A N7 1 ATOM 58 C C5 . A A 1 3 ? -15.510 -14.544 -3.044 1.00 20.08 ? 3 A A C5 1 ATOM 59 C C6 . A A 1 3 ? -14.113 -14.450 -3.151 1.00 20.70 ? 3 A A C6 1 ATOM 60 N N6 . A A 1 3 ? -13.285 -14.301 -2.105 1.00 20.53 ? 3 A A N6 1 ATOM 61 N N1 . A A 1 3 ? -13.585 -14.513 -4.389 1.00 18.86 ? 3 A A N1 1 ATOM 62 C C2 . A A 1 3 ? -14.400 -14.652 -5.448 1.00 20.57 ? 3 A A C2 1 ATOM 63 N N3 . A A 1 3 ? -15.729 -14.752 -5.468 1.00 21.45 ? 3 A A N3 1 ATOM 64 C C4 . A A 1 3 ? -16.222 -14.684 -4.214 1.00 20.74 ? 3 A A C4 1 ATOM 65 P P . G A 1 4 ? -19.831 -19.453 -4.681 1.00 28.71 ? 4 G A P 1 ATOM 66 O OP1 . G A 1 4 ? -20.874 -20.463 -5.005 1.00 33.61 ? 4 G A OP1 1 ATOM 67 O OP2 . G A 1 4 ? -19.115 -19.556 -3.380 1.00 27.88 ? 4 G A OP2 1 ATOM 68 O "O5'" . G A 1 4 ? -18.707 -19.460 -5.817 1.00 28.97 ? 4 G A "O5'" 1 ATOM 69 C "C5'" . G A 1 4 ? -19.002 -19.768 -7.170 1.00 29.70 ? 4 G A "C5'" 1 ATOM 70 C "C4'" . G A 1 4 ? -17.739 -20.032 -7.957 1.00 27.78 ? 4 G A "C4'" 1 ATOM 71 O "O4'" . G A 1 4 ? -16.922 -18.825 -7.998 1.00 26.69 ? 4 G A "O4'" 1 ATOM 72 C "C3'" . G A 1 4 ? -16.794 -21.083 -7.391 1.00 29.82 ? 4 G A "C3'" 1 ATOM 73 O "O3'" . G A 1 4 ? -17.185 -22.419 -7.655 1.00 33.82 ? 4 G A "O3'" 1 ATOM 74 C "C2'" . G A 1 4 ? -15.474 -20.694 -8.034 1.00 27.47 ? 4 G A "C2'" 1 ATOM 75 O "O2'" . G A 1 4 ? -15.478 -21.041 -9.412 1.00 28.11 ? 4 G A "O2'" 1 ATOM 76 C "C1'" . G A 1 4 ? -15.553 -19.174 -7.933 1.00 24.86 ? 4 G A "C1'" 1 ATOM 77 N N9 . G A 1 4 ? -15.034 -18.708 -6.635 1.00 22.07 ? 4 G A N9 1 ATOM 78 C C8 . G A 1 4 ? -15.801 -18.389 -5.539 1.00 23.22 ? 4 G A C8 1 ATOM 79 N N7 . G A 1 4 ? -15.090 -18.021 -4.515 1.00 22.62 ? 4 G A N7 1 ATOM 80 C C5 . G A 1 4 ? -13.773 -18.105 -4.953 1.00 20.59 ? 4 G A C5 1 ATOM 81 C C6 . G A 1 4 ? -12.565 -17.817 -4.267 1.00 20.12 ? 4 G A C6 1 ATOM 82 O O6 . G A 1 4 ? -12.420 -17.435 -3.103 1.00 20.78 ? 4 G A O6 1 ATOM 83 N N1 . G A 1 4 ? -11.449 -18.032 -5.066 1.00 18.82 ? 4 G A N1 1 ATOM 84 C C2 . G A 1 4 ? -11.488 -18.475 -6.371 1.00 21.69 ? 4 G A C2 1 ATOM 85 N N2 . G A 1 4 ? -10.299 -18.620 -6.987 1.00 21.50 ? 4 G A N2 1 ATOM 86 N N3 . G A 1 4 ? -12.612 -18.745 -7.030 1.00 22.91 ? 4 G A N3 1 ATOM 87 C C4 . G A 1 4 ? -13.712 -18.536 -6.263 1.00 21.66 ? 4 G A C4 1 ATOM 88 P P . A A 1 5 ? -16.953 -23.557 -6.539 1.00 35.46 ? 5 A A P 1 ATOM 89 O OP1 . A A 1 5 ? -17.358 -24.836 -7.187 1.00 41.04 ? 5 A A OP1 1 ATOM 90 O OP2 . A A 1 5 ? -17.590 -23.125 -5.267 1.00 36.24 ? 5 A A OP2 1 ATOM 91 O "O5'" . A A 1 5 ? -15.376 -23.567 -6.275 1.00 33.84 ? 5 A A "O5'" 1 ATOM 92 C "C5'" . A A 1 5 ? -14.501 -24.289 -7.126 1.00 33.19 ? 5 A A "C5'" 1 ATOM 93 C "C4'" . A A 1 5 ? -13.042 -24.122 -6.761 1.00 32.06 ? 5 A A "C4'" 1 ATOM 94 O "O4'" . A A 1 5 ? -12.692 -22.715 -6.622 1.00 29.50 ? 5 A A "O4'" 1 ATOM 95 C "C3'" . A A 1 5 ? -12.540 -24.724 -5.458 1.00 31.71 ? 5 A A "C3'" 1 ATOM 96 O "O3'" . A A 1 5 ? -12.434 -26.139 -5.457 1.00 34.51 ? 5 A A "O3'" 1 ATOM 97 C "C2'" . A A 1 5 ? -11.201 -24.017 -5.312 1.00 28.61 ? 5 A A "C2'" 1 ATOM 98 O "O2'" . A A 1 5 ? -10.272 -24.537 -6.252 1.00 29.70 ? 5 A A "O2'" 1 ATOM 99 C "C1'" . A A 1 5 ? -11.582 -22.598 -5.748 1.00 28.30 ? 5 A A "C1'" 1 ATOM 100 N N9 . A A 1 5 ? -11.967 -21.812 -4.564 1.00 25.03 ? 5 A A N9 1 ATOM 101 C C8 . A A 1 5 ? -13.218 -21.547 -4.058 1.00 26.31 ? 5 A A C8 1 ATOM 102 N N7 . A A 1 5 ? -13.184 -20.857 -2.944 1.00 24.43 ? 5 A A N7 1 ATOM 103 C C5 . A A 1 5 ? -11.828 -20.685 -2.681 1.00 23.74 ? 5 A A C5 1 ATOM 104 C C6 . A A 1 5 ? -11.136 -20.034 -1.640 1.00 23.67 ? 5 A A C6 1 ATOM 105 N N6 . A A 1 5 ? -11.751 -19.426 -0.623 1.00 21.96 ? 5 A A N6 1 ATOM 106 N N1 . A A 1 5 ? -9.783 -20.029 -1.673 1.00 21.06 ? 5 A A N1 1 ATOM 107 C C2 . A A 1 5 ? -9.181 -20.655 -2.700 1.00 23.40 ? 5 A A C2 1 ATOM 108 N N3 . A A 1 5 ? -9.721 -21.300 -3.735 1.00 24.60 ? 5 A A N3 1 ATOM 109 C C4 . A A 1 5 ? -11.066 -21.279 -3.663 1.00 25.18 ? 5 A A C4 1 ATOM 110 P P . A A 1 6 ? -12.600 -26.963 -4.078 1.00 38.31 ? 6 A A P 1 ATOM 111 O OP1 . A A 1 6 ? -12.795 -28.387 -4.448 1.00 42.14 ? 6 A A OP1 1 ATOM 112 O OP2 . A A 1 6 ? -13.588 -26.287 -3.199 1.00 37.73 ? 6 A A OP2 1 ATOM 113 O "O5'" . A A 1 6 ? -11.197 -26.819 -3.352 1.00 36.24 ? 6 A A "O5'" 1 ATOM 114 C "C5'" . A A 1 6 ? -9.997 -27.114 -4.039 1.00 36.35 ? 6 A A "C5'" 1 ATOM 115 C "C4'" . A A 1 6 ? -8.820 -26.432 -3.397 1.00 34.36 ? 6 A A "C4'" 1 ATOM 116 O "O4'" . A A 1 6 ? -9.047 -25.001 -3.313 1.00 33.05 ? 6 A A "O4'" 1 ATOM 117 C "C3'" . A A 1 6 ? -8.523 -26.829 -1.967 1.00 34.92 ? 6 A A "C3'" 1 ATOM 118 O "O3'" . A A 1 6 ? -7.867 -28.080 -1.880 1.00 37.80 ? 6 A A "O3'" 1 ATOM 119 C "C2'" . A A 1 6 ? -7.700 -25.647 -1.470 1.00 33.57 ? 6 A A "C2'" 1 ATOM 120 O "O2'" . A A 1 6 ? -6.366 -25.714 -1.953 1.00 34.94 ? 6 A A "O2'" 1 ATOM 121 C "C1'" . A A 1 6 ? -8.407 -24.482 -2.165 1.00 31.85 ? 6 A A "C1'" 1 ATOM 122 N N9 . A A 1 6 ? -9.420 -23.876 -1.283 1.00 29.32 ? 6 A A N9 1 ATOM 123 C C8 . A A 1 6 ? -10.788 -24.014 -1.298 1.00 29.49 ? 6 A A C8 1 ATOM 124 N N7 . A A 1 6 ? -11.392 -23.339 -0.345 1.00 28.52 ? 6 A A N7 1 ATOM 125 C C5 . A A 1 6 ? -10.358 -22.726 0.337 1.00 25.03 ? 6 A A C5 1 ATOM 126 C C6 . A A 1 6 ? -10.334 -21.870 1.451 1.00 23.84 ? 6 A A C6 1 ATOM 127 N N6 . A A 1 6 ? -11.434 -21.464 2.092 1.00 23.46 ? 6 A A N6 1 ATOM 128 N N1 . A A 1 6 ? -9.129 -21.428 1.889 1.00 24.21 ? 6 A A N1 1 ATOM 129 C C2 . A A 1 6 ? -8.032 -21.828 1.227 1.00 23.29 ? 6 A A C2 1 ATOM 130 N N3 . A A 1 6 ? -7.933 -22.632 0.177 1.00 24.88 ? 6 A A N3 1 ATOM 131 C C4 . A A 1 6 ? -9.142 -23.049 -0.229 1.00 24.37 ? 6 A A C4 1 ATOM 132 P P . G A 1 7 ? -8.101 -29.022 -0.600 1.00 40.93 ? 7 G A P 1 ATOM 133 O OP1 . G A 1 7 ? -7.501 -30.350 -0.894 1.00 42.71 ? 7 G A OP1 1 ATOM 134 O OP2 . G A 1 7 ? -9.523 -28.938 -0.185 1.00 36.30 ? 7 G A OP2 1 ATOM 135 O "O5'" . G A 1 7 ? -7.207 -28.329 0.508 1.00 29.01 ? 7 G A "O5'" 1 ATOM 136 C "C5'" . G A 1 7 ? -5.790 -28.350 0.419 1.00 33.92 ? 7 G A "C5'" 1 ATOM 137 C "C4'" . G A 1 7 ? -5.166 -27.253 1.244 1.00 29.23 ? 7 G A "C4'" 1 ATOM 138 O "O4'" . G A 1 7 ? -5.879 -26.014 1.009 1.00 34.83 ? 7 G A "O4'" 1 ATOM 139 C "C3'" . G A 1 7 ? -5.219 -27.433 2.758 1.00 29.38 ? 7 G A "C3'" 1 ATOM 140 O "O3'" . G A 1 7 ? -4.168 -28.239 3.257 1.00 31.66 ? 7 G A "O3'" 1 ATOM 141 C "C2'" . G A 1 7 ? -5.151 -26.006 3.271 1.00 31.95 ? 7 G A "C2'" 1 ATOM 142 O "O2'" . G A 1 7 ? -3.811 -25.531 3.266 1.00 35.29 ? 7 G A "O2'" 1 ATOM 143 C "C1'" . G A 1 7 ? -5.943 -25.260 2.199 1.00 28.69 ? 7 G A "C1'" 1 ATOM 144 N N9 . G A 1 7 ? -7.363 -25.083 2.577 1.00 27.86 ? 7 G A N9 1 ATOM 145 C C8 . G A 1 7 ? -8.480 -25.641 2.000 1.00 30.25 ? 7 G A C8 1 ATOM 146 N N7 . G A 1 7 ? -9.595 -25.264 2.576 1.00 27.85 ? 7 G A N7 1 ATOM 147 C C5 . G A 1 7 ? -9.185 -24.397 3.584 1.00 23.53 ? 7 G A C5 1 ATOM 148 C C6 . G A 1 7 ? -9.926 -23.656 4.557 1.00 26.02 ? 7 G A C6 1 ATOM 149 O O6 . G A 1 7 ? -11.140 -23.588 4.750 1.00 27.20 ? 7 G A O6 1 ATOM 150 N N1 . G A 1 7 ? -9.106 -22.913 5.376 1.00 23.58 ? 7 G A N1 1 ATOM 151 C C2 . G A 1 7 ? -7.738 -22.876 5.311 1.00 27.20 ? 7 G A C2 1 ATOM 152 N N2 . G A 1 7 ? -7.134 -22.089 6.208 1.00 24.39 ? 7 G A N2 1 ATOM 153 N N3 . G A 1 7 ? -7.030 -23.551 4.416 1.00 25.61 ? 7 G A N3 1 ATOM 154 C C4 . G A 1 7 ? -7.811 -24.281 3.595 1.00 28.36 ? 7 G A C4 1 ATOM 155 P P . A A 1 8 ? -4.438 -29.247 4.477 1.00 28.16 ? 8 A A P 1 ATOM 156 O OP1 . A A 1 8 ? -3.292 -30.206 4.480 1.00 31.68 ? 8 A A OP1 1 ATOM 157 O OP2 . A A 1 8 ? -5.810 -29.766 4.329 1.00 26.52 ? 8 A A OP2 1 ATOM 158 O "O5'" . A A 1 8 ? -4.359 -28.334 5.780 1.00 26.16 ? 8 A A "O5'" 1 ATOM 159 C "C5'" . A A 1 8 ? -3.108 -28.012 6.358 1.00 27.29 ? 8 A A "C5'" 1 ATOM 160 C "C4'" . A A 1 8 ? -3.266 -27.219 7.628 1.00 27.76 ? 8 A A "C4'" 1 ATOM 161 O "O4'" . A A 1 8 ? -3.870 -25.925 7.341 1.00 24.86 ? 8 A A "O4'" 1 ATOM 162 C "C3'" . A A 1 8 ? -4.180 -27.806 8.689 1.00 26.55 ? 8 A A "C3'" 1 ATOM 163 O "O3'" . A A 1 8 ? -3.601 -28.866 9.431 1.00 24.88 ? 8 A A "O3'" 1 ATOM 164 C "C2'" . A A 1 8 ? -4.509 -26.578 9.518 1.00 22.40 ? 8 A A "C2'" 1 ATOM 165 O "O2'" . A A 1 8 ? -3.382 -26.184 10.284 1.00 26.91 ? 8 A A "O2'" 1 ATOM 166 C "C1'" . A A 1 8 ? -4.713 -25.546 8.412 1.00 24.64 ? 8 A A "C1'" 1 ATOM 167 N N9 . A A 1 8 ? -6.110 -25.591 7.939 1.00 22.07 ? 8 A A N9 1 ATOM 168 C C8 . A A 1 8 ? -6.609 -26.276 6.864 1.00 23.59 ? 8 A A C8 1 ATOM 169 N N7 . A A 1 8 ? -7.905 -26.167 6.703 1.00 23.18 ? 8 A A N7 1 ATOM 170 C C5 . A A 1 8 ? -8.297 -25.365 7.764 1.00 20.10 ? 8 A A C5 1 ATOM 171 C C6 . A A 1 8 ? -9.564 -24.882 8.160 1.00 20.82 ? 8 A A C6 1 ATOM 172 N N6 . A A 1 8 ? -10.711 -25.143 7.518 1.00 20.84 ? 8 A A N6 1 ATOM 173 N N1 . A A 1 8 ? -9.596 -24.110 9.268 1.00 20.14 ? 8 A A N1 1 ATOM 174 C C2 . A A 1 8 ? -8.455 -23.853 9.915 1.00 21.07 ? 8 A A C2 1 ATOM 175 N N3 . A A 1 8 ? -7.216 -24.241 9.635 1.00 22.40 ? 8 A A N3 1 ATOM 176 C C4 . A A 1 8 ? -7.207 -25.012 8.539 1.00 21.33 ? 8 A A C4 1 ATOM 177 P P . G A 1 9 ? -4.519 -30.086 9.959 1.00 22.56 ? 9 G A P 1 ATOM 178 O OP1 . G A 1 9 ? -3.600 -31.110 10.514 1.00 28.23 ? 9 G A OP1 1 ATOM 179 O OP2 . G A 1 9 ? -5.507 -30.479 8.938 1.00 25.71 ? 9 G A OP2 1 ATOM 180 O "O5'" . G A 1 9 ? -5.333 -29.433 11.170 1.00 23.68 ? 9 G A "O5'" 1 ATOM 181 C "C5'" . G A 1 9 ? -4.661 -28.926 12.316 1.00 25.55 ? 9 G A "C5'" 1 ATOM 182 C "C4'" . G A 1 9 ? -5.565 -28.060 13.162 1.00 23.26 ? 9 G A "C4'" 1 ATOM 183 O "O4'" . G A 1 9 ? -6.116 -26.984 12.353 1.00 22.77 ? 9 G A "O4'" 1 ATOM 184 C "C3'" . G A 1 9 ? -6.794 -28.735 13.751 1.00 21.55 ? 9 G A "C3'" 1 ATOM 185 O "O3'" . G A 1 9 ? -6.517 -29.515 14.906 1.00 24.66 ? 9 G A "O3'" 1 ATOM 186 C "C2'" . G A 1 9 ? -7.724 -27.551 14.003 1.00 23.67 ? 9 G A "C2'" 1 ATOM 187 O "O2'" . G A 1 9 ? -7.372 -26.840 15.186 1.00 24.75 ? 9 G A "O2'" 1 ATOM 188 C "C1'" . G A 1 9 ? -7.432 -26.681 12.780 1.00 24.09 ? 9 G A "C1'" 1 ATOM 189 N N9 . G A 1 9 ? -8.379 -27.031 11.714 1.00 21.46 ? 9 G A N9 1 ATOM 190 C C8 . G A 1 9 ? -8.202 -27.829 10.606 1.00 20.26 ? 9 G A C8 1 ATOM 191 N N7 . G A 1 9 ? -9.295 -27.974 9.901 1.00 20.69 ? 9 G A N7 1 ATOM 192 C C5 . G A 1 9 ? -10.254 -27.246 10.594 1.00 18.46 ? 9 G A C5 1 ATOM 193 C C6 . G A 1 9 ? -11.633 -27.024 10.317 1.00 18.38 ? 9 G A C6 1 ATOM 194 O O6 . G A 1 9 ? -12.324 -27.451 9.385 1.00 21.07 ? 9 G A O6 1 ATOM 195 N N1 . G A 1 9 ? -12.226 -26.218 11.281 1.00 20.97 ? 9 G A N1 1 ATOM 196 C C2 . G A 1 9 ? -11.581 -25.691 12.369 1.00 21.05 ? 9 G A C2 1 ATOM 197 N N2 . G A 1 9 ? -12.343 -24.942 13.185 1.00 20.86 ? 9 G A N2 1 ATOM 198 N N3 . G A 1 9 ? -10.296 -25.879 12.645 1.00 20.58 ? 9 G A N3 1 ATOM 199 C C4 . G A 1 9 ? -9.700 -26.666 11.718 1.00 21.62 ? 9 G A C4 1 HETATM 200 N N1 . 5CM B 2 1 ? -17.140 -24.937 12.090 1.00 23.28 ? 1 5CM B N1 1 HETATM 201 C C2 . 5CM B 2 1 ? -15.670 -25.090 12.129 1.00 22.97 ? 1 5CM B C2 1 HETATM 202 N N3 . 5CM B 2 1 ? -15.032 -25.880 11.060 1.00 20.92 ? 1 5CM B N3 1 HETATM 203 C C4 . 5CM B 2 1 ? -15.796 -26.497 10.014 1.00 23.25 ? 1 5CM B C4 1 HETATM 204 C C5 . 5CM B 2 1 ? -17.271 -26.341 9.978 1.00 25.84 ? 1 5CM B C5 1 HETATM 205 C C5A . 5CM B 2 1 ? -18.052 -26.986 8.869 1.00 28.47 ? 1 5CM B C5A 1 HETATM 206 C C6 . 5CM B 2 1 ? -17.928 -25.552 11.036 1.00 24.70 ? 1 5CM B C6 1 HETATM 207 O O2 . 5CM B 2 1 ? -15.041 -24.609 12.973 1.00 23.24 ? 1 5CM B O2 1 HETATM 208 N N4 . 5CM B 2 1 ? -15.139 -27.266 8.983 1.00 25.08 ? 1 5CM B N4 1 HETATM 209 C "C1'" . 5CM B 2 1 ? -17.763 -24.165 13.145 1.00 23.77 ? 1 5CM B "C1'" 1 HETATM 210 C "C2'" . 5CM B 2 1 ? -17.539 -22.891 13.013 1.00 25.06 ? 1 5CM B "C2'" 1 HETATM 211 C "C3'" . 5CM B 2 1 ? -18.801 -22.292 12.197 1.00 27.13 ? 1 5CM B "C3'" 1 HETATM 212 C "C4'" . 5CM B 2 1 ? -19.880 -23.018 12.636 1.00 28.03 ? 1 5CM B "C4'" 1 HETATM 213 O "O4'" . 5CM B 2 1 ? -19.346 -24.370 12.998 1.00 26.53 ? 1 5CM B "O4'" 1 HETATM 214 O "O3'" . 5CM B 2 1 ? -18.994 -20.958 12.515 1.00 28.59 ? 1 5CM B "O3'" 1 HETATM 215 C "C5'" . 5CM B 2 1 ? -20.894 -23.175 11.525 1.00 30.73 ? 1 5CM B "C5'" 1 HETATM 216 O "O5'" . 5CM B 2 1 ? -21.753 -24.170 11.879 1.00 39.19 ? 1 5CM B "O5'" 1 ATOM 217 P P . DT B 2 2 ? -18.214 -19.795 11.722 1.00 28.48 ? 2 DT B P 1 ATOM 218 O OP1 . DT B 2 2 ? -18.747 -18.491 12.199 1.00 33.66 ? 2 DT B OP1 1 ATOM 219 O OP2 . DT B 2 2 ? -18.213 -20.123 10.273 1.00 29.23 ? 2 DT B OP2 1 ATOM 220 O "O5'" . DT B 2 2 ? -16.708 -19.906 12.223 1.00 26.16 ? 2 DT B "O5'" 1 ATOM 221 C "C5'" . DT B 2 2 ? -16.342 -19.418 13.505 1.00 25.48 ? 2 DT B "C5'" 1 ATOM 222 C "C4'" . DT B 2 2 ? -14.847 -19.570 13.727 1.00 24.31 ? 2 DT B "C4'" 1 ATOM 223 O "O4'" . DT B 2 2 ? -14.476 -20.970 13.631 1.00 24.95 ? 2 DT B "O4'" 1 ATOM 224 C "C3'" . DT B 2 2 ? -13.960 -18.905 12.683 1.00 25.39 ? 2 DT B "C3'" 1 ATOM 225 O "O3'" . DT B 2 2 ? -13.830 -17.525 12.940 1.00 27.68 ? 2 DT B "O3'" 1 ATOM 226 C "C2'" . DT B 2 2 ? -12.653 -19.631 12.919 1.00 25.25 ? 2 DT B "C2'" 1 ATOM 227 C "C1'" . DT B 2 2 ? -13.151 -21.056 13.107 1.00 22.86 ? 2 DT B "C1'" 1 ATOM 228 N N1 . DT B 2 2 ? -13.162 -21.848 11.842 1.00 22.83 ? 2 DT B N1 1 ATOM 229 C C2 . DT B 2 2 ? -11.971 -22.368 11.392 1.00 21.84 ? 2 DT B C2 1 ATOM 230 O O2 . DT B 2 2 ? -10.914 -22.213 11.974 1.00 21.28 ? 2 DT B O2 1 ATOM 231 N N3 . DT B 2 2 ? -12.059 -23.084 10.240 1.00 22.16 ? 2 DT B N3 1 ATOM 232 C C4 . DT B 2 2 ? -13.189 -23.322 9.492 1.00 20.93 ? 2 DT B C4 1 ATOM 233 O O4 . DT B 2 2 ? -13.165 -23.999 8.472 1.00 23.86 ? 2 DT B O4 1 ATOM 234 C C5 . DT B 2 2 ? -14.409 -22.742 10.010 1.00 21.51 ? 2 DT B C5 1 ATOM 235 C C7 . DT B 2 2 ? -15.704 -22.931 9.274 1.00 23.08 ? 2 DT B C7 1 ATOM 236 C C6 . DT B 2 2 ? -14.337 -22.037 11.150 1.00 22.63 ? 2 DT B C6 1 ATOM 237 P P . DC B 2 3 ? -13.669 -16.496 11.711 1.00 28.95 ? 3 DC B P 1 ATOM 238 O OP1 . DC B 2 3 ? -13.766 -15.137 12.299 1.00 36.79 ? 3 DC B OP1 1 ATOM 239 O OP2 . DC B 2 3 ? -14.615 -16.907 10.656 1.00 30.72 ? 3 DC B OP2 1 ATOM 240 O "O5'" . DC B 2 3 ? -12.171 -16.737 11.190 1.00 29.83 ? 3 DC B "O5'" 1 ATOM 241 C "C5'" . DC B 2 3 ? -11.063 -16.494 12.048 1.00 30.90 ? 3 DC B "C5'" 1 ATOM 242 C "C4'" . DC B 2 3 ? -9.815 -17.214 11.555 1.00 30.87 ? 3 DC B "C4'" 1 ATOM 243 O "O4'" . DC B 2 3 ? -10.083 -18.633 11.419 1.00 31.41 ? 3 DC B "O4'" 1 ATOM 244 C "C3'" . DC B 2 3 ? -9.327 -16.807 10.175 1.00 31.12 ? 3 DC B "C3'" 1 ATOM 245 O "O3'" . DC B 2 3 ? -8.561 -15.614 10.252 1.00 33.17 ? 3 DC B "O3'" 1 ATOM 246 C "C2'" . DC B 2 3 ? -8.457 -18.005 9.811 1.00 31.56 ? 3 DC B "C2'" 1 ATOM 247 C "C1'" . DC B 2 3 ? -9.283 -19.167 10.367 1.00 28.83 ? 3 DC B "C1'" 1 ATOM 248 N N1 . DC B 2 3 ? -10.165 -19.797 9.340 1.00 26.57 ? 3 DC B N1 1 ATOM 249 C C2 . DC B 2 3 ? -9.609 -20.651 8.372 1.00 25.46 ? 3 DC B C2 1 ATOM 250 O O2 . DC B 2 3 ? -8.390 -20.875 8.385 1.00 27.98 ? 3 DC B O2 1 ATOM 251 N N3 . DC B 2 3 ? -10.421 -21.204 7.446 1.00 27.30 ? 3 DC B N3 1 ATOM 252 C C4 . DC B 2 3 ? -11.733 -20.937 7.450 1.00 25.79 ? 3 DC B C4 1 ATOM 253 N N4 . DC B 2 3 ? -12.486 -21.509 6.506 1.00 25.68 ? 3 DC B N4 1 ATOM 254 C C5 . DC B 2 3 ? -12.321 -20.070 8.420 1.00 26.91 ? 3 DC B C5 1 ATOM 255 C C6 . DC B 2 3 ? -11.509 -19.523 9.333 1.00 26.26 ? 3 DC B C6 1 ATOM 256 P P . DT B 2 4 ? -8.350 -14.691 8.947 1.00 32.34 ? 4 DT B P 1 ATOM 257 O OP1 . DT B 2 4 ? -7.573 -13.524 9.421 1.00 34.45 ? 4 DT B OP1 1 ATOM 258 O OP2 . DT B 2 4 ? -9.647 -14.494 8.263 1.00 32.45 ? 4 DT B OP2 1 ATOM 259 O "O5'" . DT B 2 4 ? -7.429 -15.569 7.980 1.00 31.13 ? 4 DT B "O5'" 1 ATOM 260 C "C5'" . DT B 2 4 ? -6.074 -15.804 8.307 1.00 28.03 ? 4 DT B "C5'" 1 ATOM 261 C "C4'" . DT B 2 4 ? -5.379 -16.578 7.199 1.00 28.27 ? 4 DT B "C4'" 1 ATOM 262 O "O4'" . DT B 2 4 ? -5.933 -17.915 7.108 1.00 26.96 ? 4 DT B "O4'" 1 ATOM 263 C "C3'" . DT B 2 4 ? -5.563 -16.012 5.806 1.00 26.42 ? 4 DT B "C3'" 1 ATOM 264 O "O3'" . DT B 2 4 ? -4.649 -14.949 5.586 1.00 27.07 ? 4 DT B "O3'" 1 ATOM 265 C "C2'" . DT B 2 4 ? -5.236 -17.224 4.953 1.00 25.58 ? 4 DT B "C2'" 1 ATOM 266 C "C1'" . DT B 2 4 ? -5.904 -18.343 5.755 1.00 25.96 ? 4 DT B "C1'" 1 ATOM 267 N N1 . DT B 2 4 ? -7.299 -18.636 5.315 1.00 26.01 ? 4 DT B N1 1 ATOM 268 C C2 . DT B 2 4 ? -7.499 -19.480 4.244 1.00 24.11 ? 4 DT B C2 1 ATOM 269 O O2 . DT B 2 4 ? -6.587 -19.999 3.618 1.00 27.33 ? 4 DT B O2 1 ATOM 270 N N3 . DT B 2 4 ? -8.810 -19.685 3.917 1.00 24.96 ? 4 DT B N3 1 ATOM 271 C C4 . DT B 2 4 ? -9.923 -19.148 4.542 1.00 25.46 ? 4 DT B C4 1 ATOM 272 O O4 . DT B 2 4 ? -11.065 -19.401 4.176 1.00 27.02 ? 4 DT B O4 1 ATOM 273 C C5 . DT B 2 4 ? -9.644 -18.266 5.655 1.00 26.02 ? 4 DT B C5 1 ATOM 274 C C7 . DT B 2 4 ? -10.770 -17.617 6.407 1.00 27.26 ? 4 DT B C7 1 ATOM 275 C C6 . DT B 2 4 ? -8.359 -18.058 5.986 1.00 24.84 ? 4 DT B C6 1 ATOM 276 P P . DT B 2 5 ? -4.970 -13.837 4.470 1.00 25.73 ? 5 DT B P 1 ATOM 277 O OP1 . DT B 2 5 ? -3.929 -12.785 4.608 1.00 26.36 ? 5 DT B OP1 1 ATOM 278 O OP2 . DT B 2 5 ? -6.406 -13.499 4.505 1.00 26.79 ? 5 DT B OP2 1 ATOM 279 O "O5'" . DT B 2 5 ? -4.695 -14.602 3.102 1.00 23.24 ? 5 DT B "O5'" 1 ATOM 280 C "C5'" . DT B 2 5 ? -3.357 -14.945 2.762 1.00 22.78 ? 5 DT B "C5'" 1 ATOM 281 C "C4'" . DT B 2 5 ? -3.317 -15.918 1.603 1.00 22.67 ? 5 DT B "C4'" 1 ATOM 282 O "O4'" . DT B 2 5 ? -4.089 -17.099 1.927 1.00 23.69 ? 5 DT B "O4'" 1 ATOM 283 C "C3'" . DT B 2 5 ? -3.936 -15.427 0.315 1.00 22.98 ? 5 DT B "C3'" 1 ATOM 284 O "O3'" . DT B 2 5 ? -3.032 -14.591 -0.372 1.00 23.40 ? 5 DT B "O3'" 1 ATOM 285 C "C2'" . DT B 2 5 ? -4.145 -16.743 -0.415 1.00 24.37 ? 5 DT B "C2'" 1 ATOM 286 C "C1'" . DT B 2 5 ? -4.634 -17.627 0.732 1.00 22.98 ? 5 DT B "C1'" 1 ATOM 287 N N1 . DT B 2 5 ? -6.117 -17.672 0.847 1.00 21.69 ? 5 DT B N1 1 ATOM 288 C C2 . DT B 2 5 ? -6.791 -18.558 0.060 1.00 22.54 ? 5 DT B C2 1 ATOM 289 O O2 . DT B 2 5 ? -6.226 -19.297 -0.721 1.00 24.40 ? 5 DT B O2 1 ATOM 290 N N3 . DT B 2 5 ? -8.152 -18.563 0.229 1.00 19.47 ? 5 DT B N3 1 ATOM 291 C C4 . DT B 2 5 ? -8.887 -17.773 1.092 1.00 21.20 ? 5 DT B C4 1 ATOM 292 O O4 . DT B 2 5 ? -10.114 -17.849 1.168 1.00 22.24 ? 5 DT B O4 1 ATOM 293 C C5 . DT B 2 5 ? -8.114 -16.845 1.888 1.00 20.74 ? 5 DT B C5 1 ATOM 294 C C7 . DT B 2 5 ? -8.799 -15.931 2.865 1.00 22.30 ? 5 DT B C7 1 ATOM 295 C C6 . DT B 2 5 ? -6.777 -16.840 1.732 1.00 22.13 ? 5 DT B C6 1 ATOM 296 P P . DC B 2 6 ? -3.580 -13.536 -1.449 1.00 22.87 ? 6 DC B P 1 ATOM 297 O OP1 . DC B 2 6 ? -2.461 -12.627 -1.792 1.00 27.09 ? 6 DC B OP1 1 ATOM 298 O OP2 . DC B 2 6 ? -4.865 -12.975 -0.957 1.00 26.74 ? 6 DC B OP2 1 ATOM 299 O "O5'" . DC B 2 6 ? -3.933 -14.407 -2.745 1.00 23.27 ? 6 DC B "O5'" 1 ATOM 300 C "C5'" . DC B 2 6 ? -2.899 -14.977 -3.544 1.00 21.96 ? 6 DC B "C5'" 1 ATOM 301 C "C4'" . DC B 2 6 ? -3.489 -15.804 -4.667 1.00 21.33 ? 6 DC B "C4'" 1 ATOM 302 O "O4'" . DC B 2 6 ? -4.258 -16.895 -4.106 1.00 20.95 ? 6 DC B "O4'" 1 ATOM 303 C "C3'" . DC B 2 6 ? -4.475 -15.069 -5.556 1.00 21.91 ? 6 DC B "C3'" 1 ATOM 304 O "O3'" . DC B 2 6 ? -3.786 -14.354 -6.569 1.00 23.94 ? 6 DC B "O3'" 1 ATOM 305 C "C2'" . DC B 2 6 ? -5.279 -16.225 -6.136 1.00 22.02 ? 6 DC B "C2'" 1 ATOM 306 C "C1'" . DC B 2 6 ? -5.398 -17.144 -4.924 1.00 21.52 ? 6 DC B "C1'" 1 ATOM 307 N N1 . DC B 2 6 ? -6.643 -16.918 -4.123 1.00 20.93 ? 6 DC B N1 1 ATOM 308 C C2 . DC B 2 6 ? -7.845 -17.464 -4.577 1.00 19.45 ? 6 DC B C2 1 ATOM 309 O O2 . DC B 2 6 ? -7.845 -18.110 -5.631 1.00 21.20 ? 6 DC B O2 1 ATOM 310 N N3 . DC B 2 6 ? -8.978 -17.275 -3.845 1.00 19.71 ? 6 DC B N3 1 ATOM 311 C C4 . DC B 2 6 ? -8.936 -16.562 -2.714 1.00 20.06 ? 6 DC B C4 1 ATOM 312 N N4 . DC B 2 6 ? -10.079 -16.397 -2.031 1.00 20.78 ? 6 DC B N4 1 ATOM 313 C C5 . DC B 2 6 ? -7.715 -15.994 -2.230 1.00 20.91 ? 6 DC B C5 1 ATOM 314 C C6 . DC B 2 6 ? -6.604 -16.189 -2.966 1.00 19.79 ? 6 DC B C6 1 ATOM 315 P P . DT B 2 7 ? -4.280 -12.889 -7.000 1.00 23.73 ? 7 DT B P 1 ATOM 316 O OP1 . DT B 2 7 ? -3.331 -12.400 -8.032 1.00 27.62 ? 7 DT B OP1 1 ATOM 317 O OP2 . DT B 2 7 ? -4.545 -12.101 -5.792 1.00 24.98 ? 7 DT B OP2 1 ATOM 318 O "O5'" . DT B 2 7 ? -5.678 -13.144 -7.718 1.00 23.95 ? 7 DT B "O5'" 1 ATOM 319 C "C5'" . DT B 2 7 ? -5.710 -13.778 -8.996 1.00 24.93 ? 7 DT B "C5'" 1 ATOM 320 C "C4'" . DT B 2 7 ? -7.114 -14.238 -9.336 1.00 20.84 ? 7 DT B "C4'" 1 ATOM 321 O "O4'" . DT B 2 7 ? -7.604 -15.083 -8.272 1.00 21.27 ? 7 DT B "O4'" 1 ATOM 322 C "C3'" . DT B 2 7 ? -8.153 -13.135 -9.464 1.00 23.15 ? 7 DT B "C3'" 1 ATOM 323 O "O3'" . DT B 2 7 ? -8.106 -12.568 -10.777 1.00 22.22 ? 7 DT B "O3'" 1 ATOM 324 C "C2'" . DT B 2 7 ? -9.438 -13.918 -9.243 1.00 22.37 ? 7 DT B "C2'" 1 ATOM 325 C "C1'" . DT B 2 7 ? -9.006 -14.923 -8.168 1.00 18.70 ? 7 DT B "C1'" 1 ATOM 326 N N1 . DT B 2 7 ? -9.357 -14.491 -6.794 1.00 20.71 ? 7 DT B N1 1 ATOM 327 C C2 . DT B 2 7 ? -10.637 -14.709 -6.366 1.00 20.55 ? 7 DT B C2 1 ATOM 328 O O2 . DT B 2 7 ? -11.484 -15.221 -7.064 1.00 20.44 ? 7 DT B O2 1 ATOM 329 N N3 . DT B 2 7 ? -10.900 -14.299 -5.089 1.00 17.98 ? 7 DT B N3 1 ATOM 330 C C4 . DT B 2 7 ? -10.031 -13.687 -4.209 1.00 19.12 ? 7 DT B C4 1 ATOM 331 O O4 . DT B 2 7 ? -10.384 -13.335 -3.082 1.00 19.46 ? 7 DT B O4 1 ATOM 332 C C5 . DT B 2 7 ? -8.689 -13.467 -4.720 1.00 20.94 ? 7 DT B C5 1 ATOM 333 C C7 . DT B 2 7 ? -7.650 -12.808 -3.858 1.00 21.46 ? 7 DT B C7 1 ATOM 334 C C6 . DT B 2 7 ? -8.413 -13.884 -5.973 1.00 20.62 ? 7 DT B C6 1 ATOM 335 P P . DT B 2 8 ? -8.571 -11.046 -11.030 1.00 23.14 ? 8 DT B P 1 ATOM 336 O OP1 . DT B 2 8 ? -8.071 -10.681 -12.374 1.00 26.42 ? 8 DT B OP1 1 ATOM 337 O OP2 . DT B 2 8 ? -8.183 -10.236 -9.856 1.00 24.49 ? 8 DT B OP2 1 ATOM 338 O "O5'" . DT B 2 8 ? -10.173 -11.103 -11.084 1.00 22.20 ? 8 DT B "O5'" 1 ATOM 339 C "C5'" . DT B 2 8 ? -10.836 -11.832 -12.111 1.00 21.60 ? 8 DT B "C5'" 1 ATOM 340 C "C4'" . DT B 2 8 ? -12.290 -12.074 -11.740 1.00 20.19 ? 8 DT B "C4'" 1 ATOM 341 O "O4'" . DT B 2 8 ? -12.344 -12.809 -10.496 1.00 20.71 ? 8 DT B "O4'" 1 ATOM 342 C "C3'" . DT B 2 8 ? -13.114 -10.821 -11.484 1.00 21.49 ? 8 DT B "C3'" 1 ATOM 343 O "O3'" . DT B 2 8 ? -13.676 -10.353 -12.704 1.00 20.97 ? 8 DT B "O3'" 1 ATOM 344 C "C2'" . DT B 2 8 ? -14.201 -11.331 -10.559 1.00 20.85 ? 8 DT B "C2'" 1 ATOM 345 C "C1'" . DT B 2 8 ? -13.473 -12.387 -9.754 1.00 19.36 ? 8 DT B "C1'" 1 ATOM 346 N N1 . DT B 2 8 ? -13.051 -11.923 -8.428 1.00 18.43 ? 8 DT B N1 1 ATOM 347 C C2 . DT B 2 8 ? -13.988 -11.935 -7.440 1.00 19.34 ? 8 DT B C2 1 ATOM 348 O O2 . DT B 2 8 ? -15.140 -12.271 -7.631 1.00 20.44 ? 8 DT B O2 1 ATOM 349 N N3 . DT B 2 8 ? -13.544 -11.534 -6.214 1.00 18.98 ? 8 DT B N3 1 ATOM 350 C C4 . DT B 2 8 ? -12.270 -11.123 -5.890 1.00 20.99 ? 8 DT B C4 1 ATOM 351 O O4 . DT B 2 8 ? -11.967 -10.782 -4.754 1.00 19.56 ? 8 DT B O4 1 ATOM 352 C C5 . DT B 2 8 ? -11.318 -11.125 -6.981 1.00 20.20 ? 8 DT B C5 1 ATOM 353 C C7 . DT B 2 8 ? -9.901 -10.694 -6.744 1.00 24.29 ? 8 DT B C7 1 ATOM 354 C C6 . DT B 2 8 ? -11.749 -11.525 -8.193 1.00 21.40 ? 8 DT B C6 1 HETATM 355 N N1 . 5CM B 2 9 ? -16.901 -8.878 -8.230 1.00 19.94 ? 9 5CM B N1 1 HETATM 356 C C2 . 5CM B 2 9 ? -17.158 -8.783 -6.791 1.00 20.02 ? 9 5CM B C2 1 HETATM 357 N N3 . 5CM B 2 9 ? -16.032 -8.459 -5.905 1.00 20.33 ? 9 5CM B N3 1 HETATM 358 C C4 . 5CM B 2 9 ? -14.715 -8.265 -6.449 1.00 20.14 ? 9 5CM B C4 1 HETATM 359 C C5 . 5CM B 2 9 ? -14.465 -8.359 -7.905 1.00 19.22 ? 9 5CM B C5 1 HETATM 360 C C5A . 5CM B 2 9 ? -13.091 -8.129 -8.463 1.00 21.33 ? 9 5CM B C5A 1 HETATM 361 C C6 . 5CM B 2 9 ? -15.586 -8.695 -8.792 1.00 18.04 ? 9 5CM B C6 1 HETATM 362 O O2 . 5CM B 2 9 ? -18.237 -8.941 -6.410 1.00 21.67 ? 9 5CM B O2 1 HETATM 363 N N4 . 5CM B 2 9 ? -13.618 -7.943 -5.585 1.00 22.49 ? 9 5CM B N4 1 HETATM 364 C "C1'" . 5CM B 2 9 ? -18.017 -9.218 -9.066 1.00 19.89 ? 9 5CM B "C1'" 1 HETATM 365 C "C2'" . 5CM B 2 9 ? -18.617 -8.157 -9.532 1.00 23.04 ? 9 5CM B "C2'" 1 HETATM 366 C "C3'" . 5CM B 2 9 ? -18.082 -7.952 -11.045 1.00 20.63 ? 9 5CM B "C3'" 1 HETATM 367 C "C4'" . 5CM B 2 9 ? -17.834 -9.226 -11.517 1.00 21.82 ? 9 5CM B "C4'" 1 HETATM 368 O "O4'" . 5CM B 2 9 ? -17.394 -9.993 -10.315 1.00 21.36 ? 9 5CM B "O4'" 1 HETATM 369 O "O3'" . 5CM B 2 9 ? -19.078 -7.335 -11.812 1.00 21.57 ? 9 5CM B "O3'" 1 HETATM 370 C "C5'" . 5CM B 2 9 ? -16.689 -9.280 -12.505 1.00 20.22 ? 9 5CM B "C5'" 1 HETATM 371 O "O5'" . 5CM B 2 9 ? -15.564 -8.766 -11.949 1.00 20.28 ? 9 5CM B "O5'" 1 HETATM 372 P P . 5CM B 2 9 ? -14.166 -8.822 -12.819 1.00 20.88 ? 9 5CM B P 1 HETATM 373 O OP1 . 5CM B 2 9 ? -14.447 -8.579 -14.332 1.00 25.17 ? 9 5CM B OP1 1 HETATM 374 O OP2 . 5CM B 2 9 ? -13.111 -7.883 -12.207 1.00 22.46 ? 9 5CM B OP2 1 HETATM 375 N N1 . SPM C 3 . ? -13.597 -30.646 6.778 1.00 36.79 ? 101 SPM A N1 1 HETATM 376 C C2 . SPM C 3 . ? -12.950 -29.575 7.538 1.00 31.15 ? 101 SPM A C2 1 HETATM 377 C C3 . SPM C 3 . ? -11.875 -28.889 6.748 1.00 34.20 ? 101 SPM A C3 1 HETATM 378 C C4 . SPM C 3 . ? -10.501 -28.985 7.368 1.00 25.62 ? 101 SPM A C4 1 HETATM 379 N N5 . SPM C 3 . ? -9.848 -30.251 7.042 1.00 30.17 ? 101 SPM A N5 1 HETATM 380 C C6 . SPM C 3 . ? -8.388 -30.182 7.093 1.00 30.34 ? 101 SPM A C6 1 HETATM 381 C C7 . SPM C 3 . ? -7.746 -31.384 6.420 1.00 32.45 ? 101 SPM A C7 1 HETATM 382 C C8 . SPM C 3 . ? -6.247 -31.439 6.637 1.00 28.82 ? 101 SPM A C8 1 HETATM 383 C C9 . SPM C 3 . ? -5.683 -32.836 6.437 1.00 31.82 ? 101 SPM A C9 1 HETATM 384 N N10 . SPM C 3 . ? -4.418 -32.814 5.701 1.00 36.35 ? 101 SPM A N10 1 HETATM 385 C C11 . SPM C 3 . ? -3.245 -32.586 6.544 1.00 32.32 ? 101 SPM A C11 1 HETATM 386 C C12 . SPM C 3 . ? -3.208 -33.551 7.707 1.00 34.14 ? 101 SPM A C12 1 HETATM 387 C C13 . SPM C 3 . ? -2.323 -33.115 8.839 1.00 34.96 ? 101 SPM A C13 1 HETATM 388 N N14 . SPM C 3 . ? -2.885 -33.476 10.144 1.00 31.82 ? 101 SPM A N14 1 HETATM 389 O O . HOH D 4 . ? -3.296 -24.173 5.010 1.00 35.99 ? 201 HOH A O 1 HETATM 390 O O . HOH D 4 . ? -17.133 -13.127 2.925 1.00 36.52 ? 202 HOH A O 1 HETATM 391 O O . HOH D 4 . ? -7.819 -24.918 -6.320 1.00 32.83 ? 203 HOH A O 1 HETATM 392 O O . HOH D 4 . ? -21.916 -13.712 4.510 1.00 38.97 ? 204 HOH A O 1 HETATM 393 O O . HOH D 4 . ? -13.399 -24.329 3.781 1.00 36.53 ? 205 HOH A O 1 HETATM 394 O O . HOH D 4 . ? -3.542 -24.570 12.303 1.00 30.88 ? 206 HOH A O 1 HETATM 395 O O . HOH D 4 . ? -12.278 -7.769 -1.468 1.00 36.44 ? 207 HOH A O 1 HETATM 396 O O . HOH D 4 . ? -22.425 -6.679 3.460 1.00 32.72 ? 208 HOH A O 1 HETATM 397 O O . HOH D 4 . ? -21.768 -16.574 -7.770 1.00 36.05 ? 209 HOH A O 1 HETATM 398 O O . HOH D 4 . ? -12.887 -33.258 7.093 1.00 39.12 ? 210 HOH A O 1 HETATM 399 O O . HOH D 4 . ? -17.072 -18.043 -2.313 1.00 27.91 ? 211 HOH A O 1 HETATM 400 O O . HOH D 4 . ? -9.973 -27.317 5.281 1.00 30.55 ? 212 HOH A O 1 HETATM 401 O O . HOH D 4 . ? -14.184 -17.303 -0.963 1.00 28.85 ? 213 HOH A O 1 HETATM 402 O O . HOH D 4 . ? -14.125 -22.754 -0.121 1.00 34.27 ? 214 HOH A O 1 HETATM 403 O O . HOH D 4 . ? -4.333 -22.289 6.285 1.00 31.06 ? 215 HOH A O 1 HETATM 404 O O . HOH D 4 . ? -20.428 -11.145 -4.995 1.00 26.02 ? 216 HOH A O 1 HETATM 405 O O . HOH D 4 . ? -14.714 -13.979 0.329 1.00 33.22 ? 217 HOH A O 1 HETATM 406 O O . HOH D 4 . ? -0.957 -27.495 11.005 1.00 32.83 ? 218 HOH A O 1 HETATM 407 O O . HOH D 4 . ? -17.661 -22.075 -10.941 1.00 35.01 ? 219 HOH A O 1 HETATM 408 O O . HOH D 4 . ? -7.705 -22.402 -5.477 1.00 33.29 ? 220 HOH A O 1 HETATM 409 O O . HOH D 4 . ? -5.557 -22.796 -1.481 1.00 36.24 ? 221 HOH A O 1 HETATM 410 O O . HOH D 4 . ? -12.361 -10.817 -0.004 1.00 33.14 ? 222 HOH A O 1 HETATM 411 O O . HOH D 4 . ? -15.168 -20.173 -0.891 1.00 34.87 ? 223 HOH A O 1 HETATM 412 O O . HOH D 4 . ? -18.260 -24.436 -10.005 1.00 40.19 ? 224 HOH A O 1 HETATM 413 O O . HOH D 4 . ? -14.414 -27.853 5.715 1.00 37.67 ? 225 HOH A O 1 HETATM 414 O O . HOH D 4 . ? -1.087 -26.977 2.654 1.00 38.24 ? 226 HOH A O 1 HETATM 415 O O . HOH D 4 . ? -17.541 -17.239 0.048 1.00 34.24 ? 227 HOH A O 1 HETATM 416 O O . HOH D 4 . ? -0.121 -28.776 4.041 1.00 38.03 ? 228 HOH A O 1 HETATM 417 O O . HOH E 4 . ? -19.604 -21.313 8.804 1.00 37.12 ? 101 HOH B O 1 HETATM 418 O O . HOH E 4 . ? -3.554 -10.504 -9.617 1.00 42.42 ? 102 HOH B O 1 HETATM 419 O O . HOH E 4 . ? -7.049 -13.652 0.259 1.00 27.76 ? 103 HOH B O 1 HETATM 420 O O . HOH E 4 . ? -7.438 -12.071 2.519 1.00 31.98 ? 104 HOH B O 1 HETATM 421 O O . HOH E 4 . ? -9.115 -8.827 -13.977 1.00 39.39 ? 105 HOH B O 1 HETATM 422 O O . HOH E 4 . ? -14.598 -24.811 6.360 1.00 29.04 ? 106 HOH B O 1 HETATM 423 O O . HOH E 4 . ? -18.514 -6.668 -14.348 1.00 27.68 ? 107 HOH B O 1 HETATM 424 O O . HOH E 4 . ? -2.749 -10.916 -3.844 1.00 36.71 ? 108 HOH B O 1 HETATM 425 O O . HOH E 4 . ? -20.519 -5.219 -10.942 1.00 28.04 ? 109 HOH B O 1 HETATM 426 O O . HOH E 4 . ? -12.417 -16.525 1.703 1.00 35.16 ? 110 HOH B O 1 HETATM 427 O O . HOH E 4 . ? -13.600 -18.556 4.685 1.00 38.81 ? 111 HOH B O 1 HETATM 428 O O . HOH E 4 . ? -6.405 -20.268 -6.465 1.00 28.92 ? 112 HOH B O 1 HETATM 429 O O . HOH E 4 . ? -6.069 -9.190 -8.463 1.00 32.98 ? 113 HOH B O 1 HETATM 430 O O . HOH E 4 . ? -4.871 -22.114 3.148 1.00 31.54 ? 114 HOH B O 1 HETATM 431 O O . HOH E 4 . ? -16.073 -6.721 -15.603 1.00 29.04 ? 115 HOH B O 1 HETATM 432 O O . HOH E 4 . ? -20.452 -16.834 10.706 1.00 39.22 ? 116 HOH B O 1 HETATM 433 O O . HOH E 4 . ? -10.980 -6.950 -5.619 1.00 30.54 ? 117 HOH B O 1 HETATM 434 O O . HOH E 4 . ? -9.015 -13.854 5.521 1.00 32.16 ? 118 HOH B O 1 HETATM 435 O O . HOH E 4 . ? -5.733 -10.319 -1.377 1.00 40.73 ? 119 HOH B O 1 HETATM 436 O O . HOH E 4 . ? -21.030 -8.511 -6.401 1.00 29.79 ? 120 HOH B O 1 HETATM 437 O O . HOH E 4 . ? -10.027 -9.162 -3.478 1.00 34.94 ? 121 HOH B O 1 HETATM 438 O O . HOH E 4 . ? -9.644 -13.956 -0.372 1.00 26.58 ? 122 HOH B O 1 HETATM 439 O O . HOH E 4 . ? -5.916 -9.565 -5.926 1.00 38.83 ? 123 HOH B O 1 HETATM 440 O O . HOH E 4 . ? -9.567 -7.861 -8.967 1.00 34.02 ? 124 HOH B O 1 HETATM 441 O O . HOH E 4 . ? -15.724 -19.069 9.029 1.00 29.65 ? 125 HOH B O 1 HETATM 442 O O . HOH E 4 . ? -14.202 -15.172 15.197 1.00 38.12 ? 126 HOH B O 1 HETATM 443 O O . HOH E 4 . ? -15.295 -20.508 6.597 1.00 33.51 ? 127 HOH B O 1 HETATM 444 O O . HOH E 4 . ? -2.232 -14.766 -9.496 1.00 36.78 ? 128 HOH B O 1 HETATM 445 O O . HOH E 4 . ? -19.220 -17.397 14.962 1.00 39.70 ? 129 HOH B O 1 HETATM 446 O O . HOH E 4 . ? -17.434 -15.835 10.412 1.00 40.71 ? 130 HOH B O 1 HETATM 447 O O . HOH E 4 . ? -21.055 -27.375 11.143 1.00 36.32 ? 131 HOH B O 1 HETATM 448 O O . HOH E 4 . ? -19.425 -23.630 8.348 1.00 34.88 ? 132 HOH B O 1 HETATM 449 O O . HOH E 4 . ? -14.644 -16.735 5.731 1.00 40.70 ? 133 HOH B O 1 HETATM 450 O O . HOH E 4 . ? -7.399 -8.683 -3.891 1.00 38.79 ? 134 HOH B O 1 #