data_9J4N

_audit_conform.dict_name      mmcif_pdbx_vrpt.dic
_audit_conform.dict_version   0.070
_audit_conform.dict_location  https://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx_vrpt.dic
#
_entry.id  9J4N
#
_entity.id                        1
_entity.type                      polymer
_entity.src_method                man
_entity.pdbx_description          "Leucine tRNA_UAG (85-MER)"
_entity.formula_weight            27441.305
_entity.pdbx_number_of_molecules  1
_entity.pdbx_ec                   ?
_entity.pdbx_mutation             ?
_entity.pdbx_fragment             ?
_entity.details                   ?
#
_struct_asym.id                           A
_struct_asym.pdbx_blank_PDB_chainid_flag  ?
_struct_asym.pdbx_modified                N
_struct_asym.entity_id                    1
_struct_asym.details                      ?
#
_pdbx_vrpt_database.id             PDB
_pdbx_vrpt_database.code           9J4N
_pdbx_vrpt_database.extended_code  pdb_00009j4n
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    9J4N
_pdbx_vrpt_summary.extended_entry_id           pdb_00009j4n
_pdbx_vrpt_summary.PDB_deposition_date         2024-08-09
_pdbx_vrpt_summary.PDB_revision_number         1
_pdbx_vrpt_summary.PDB_revision_date           2025-07-09
_pdbx_vrpt_summary.RNA_suiteness               0.44
_pdbx_vrpt_summary.report_creation_date        2025-07-02:11:07
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,validation_schema,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
_pdbx_vrpt_entity.id           1
_pdbx_vrpt_entity.type         polymer
_pdbx_vrpt_entity.description  "Leucine tRNA_UAG (85-MER)"
#
_pdbx_vrpt_asym.label_asym_id  A
_pdbx_vrpt_asym.entity_id      1
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  2.9  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
4  RNAsuiteness_percent   
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1  42.75  180529     ?     ?  
2  2  1  69.97    2564  2.90  2.90  
3  1  2   0.02  164620     ?     ?  
4  2  2   0.00    2337  2.90  2.90  
5  1  3  19.04  164625     ?     ?  
6  2  3  51.21    2335  2.90  2.90  
7  1  4  28.18    3690     ?     ?  
8  2  4  28.20    1039  2.70  3.10  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  0.02  
2  4  2  A  1  1  A  0.00  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      1.18
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.54
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   1940
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  3018
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       6.11
_pdbx_vrpt_summary_geometry.num_H_reduce     880
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   1940
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.54
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  3018
_pdbx_vrpt_summary_geometry.angles_RMSZ      1.18
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            262.583
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         74.197
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.33(2.91A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        4221
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.365
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.477
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.309
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.876
_pdbx_vrpt_summary_diffraction.DCC_R                     0.2463
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.2692
_pdbx_vrpt_summary_diffraction.EDS_R                     0.2615
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.90
_pdbx_vrpt_summary_diffraction.EDS_res_low               48.68
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[72.378,74.375,90.814,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.233
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 7.95% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         15
_pdbx_vrpt_summary_diffraction.centric_outliers          1
_pdbx_vrpt_summary_diffraction.data_completeness         47.60
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      220
_pdbx_vrpt_summary_diffraction.percent_free_reflections  5.19
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     97.53
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.90
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        48.68
_pdbx_vrpt_summary_diffraction.PDB_R                     0.2476
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.2696
_pdbx_vrpt_summary_diffraction.density_fitness_version   1.0.12
_pdbx_vrpt_summary_diffraction.CCP4_version              "9.0.006 (Gargrove)"
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
 1  1  1  A   1  G  A   1  .  ?        ?     ?  
 2  1  1  A   2  C  A   2  .  ?        ?     ?  
 3  1  1  A   3  G  A   3  .  ?        ?     ?  
 4  1  1  A   4  G  A   4  .  ?        ?     ?  
 5  1  1  A   5  G  A   5  .  ?        1     ?  
 6  1  1  A   6  A  A   6  .  ?        1     ?  
 7  1  1  A   7  G  A   7  .  ?        ?     ?  
 8  1  1  A   8  U  A   8  .  ?        ?     ?  
 9  1  1  A   9  G  A   9  .  ?        ?     4  
10  1  1  A  10  G  A  10  .  ?        ?     1  
11  1  1  A  11  C  A  11  .  ?        ?     ?  
12  1  1  A  12  G  A  12  .  ?        ?     ?  
13  1  1  A  13  A  A  13  .  ?        ?     ?  
14  1  1  A  14  A  A  14  .  ?        ?     ?  
15  1  1  A  15  A  A  15  .  ?        ?     ?  
16  1  1  A  18  G  A  18  .  ?        ?     ?  
17  1  1  A  19  G  A  19  .  ?        1     ?  
18  1  1  A  20  U  A  20  .  ?        ?     ?  
19  1  1  A  21  A  A  20  .  A        ?     ?  
20  1  1  A  22  G  A  21  .  ?        ?     ?  
21  1  1  A  23  A  A  22  .  ?        ?     ?  
22  1  1  A  24  C  A  23  .  ?        1     ?  
23  1  1  A  25  G  A  24  .  ?        ?     ?  
24  1  1  A  26  C  A  25  .  ?        ?     1  
25  1  1  A  27  A  A  26  .  ?        ?     2  
26  1  1  A  28  C  A  27  .  ?        1     ?  
27  1  1  A  29  C  A  28  .  ?        ?     ?  
28  1  1  A  30  A  A  29  .  ?        ?     ?  
29  1  1  A  31  G  A  30  .  ?        ?     ?  
30  1  1  A  32  A  A  31  .  ?        ?     ?  
31  1  1  A  33  U  A  32  .  ?        ?     ?  
32  1  1  A  34  U  A  33  .  ?        ?     ?  
33  1  1  A  37  G  A  36  .  ?        ?     ?  
34  1  1  A  38  G  A  37  .  ?        ?     ?  
35  1  1  A  39  U  A  38  .  ?        ?     ?  
36  1  1  A  40  U  A  39  .  ?        ?     ?  
37  1  1  A  41  C  A  40  .  ?        ?     ?  
38  1  1  A  42  U  A  41  .  ?        ?     ?  
39  1  1  A  43  G  A  42  .  ?        ?     ?  
40  1  1  A  44  G  A  43  .  ?        ?     ?  
41  1  1  A  45  C  A  44  .  ?        ?     ?  
42  1  1  A  46  G  A  45  .  ?        ?     ?  
43  1  1  A  47  C  A  46  .  ?        ?     ?  
44  1  1  A  48  C  A  47  .  ?        ?     ?  
45  1  1  A  49  G  A  47  .  a        2     ?  
46  1  1  A  50  C  A  47  .  b        1     ?  
47  1  1  A  51  A  A  47  .  c        ?     ?  
48  1  1  A  52  A  A  47  .  d        ?     ?  
49  1  1  A  53  G  A  47  .  e        ?     ?  
50  1  1  A  54  G  A  47  .  f        ?     3  
51  1  1  A  55  U  A  47  .  g        2     1  
52  1  1  A  56  G  A  47  .  h        1     ?  
53  1  1  A  57  U  A  48  .  ?        ?     ?  
54  1  1  A  58  G  A  49  .  ?        ?     1  
55  1  1  A  59  C  A  50  .  ?        ?     3  
56  1  1  A  60  G  A  51  .  ?        ?     2  
57  1  1  A  61  A  A  52  .  ?        ?     ?  
58  1  1  A  62  G  A  53  .  ?        ?     ?  
59  1  1  A  63  U  A  54  .  ?        ?     ?  
60  1  1  A  64  U  A  55  .  ?        ?     ?  
61  1  1  A  65  C  A  56  .  ?        ?     ?  
62  1  1  A  66  A  A  57  .  ?        ?     ?  
63  1  1  A  67  A  A  58  .  ?        ?     ?  
64  1  1  A  68  G  A  59  .  ?        ?     ?  
65  1  1  A  69  U  A  60  .  ?        ?     ?  
66  1  1  A  70  C  A  61  .  ?        ?     ?  
67  1  1  A  71  U  A  62  .  ?        ?     ?  
68  1  1  A  72  C  A  63  .  ?        ?     ?  
69  1  1  A  73  G  A  64  .  ?        ?     ?  
70  1  1  A  74  C  A  65  .  ?        ?     ?  
71  1  1  A  75  C  A  66  .  ?        ?     1  
72  1  1  A  76  U  A  67  .  ?        ?     1  
73  1  1  A  77  C  A  68  .  ?        ?     ?  
74  1  1  A  78  C  A  69  .  ?        1     ?  
75  1  1  A  79  C  A  70  .  ?        ?     ?  
76  1  1  A  80  G  A  71  .  ?        1     ?  
77  1  1  A  81  C  A  72  .  ?        ?     ?  
78  1  1  A  82  A  A  73  .  ?        ?     4  
79  1  1  A  83  C  A  74  .  ?        ?     4  
80  1  1  A  84  C  A  75  .  ?        ?     ?  
81  1  1  A  85  A  A  76  .  ?        ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.RNA_score
_pdbx_vrpt_model_instance_geometry.RNA_suite
_pdbx_vrpt_model_instance_geometry.RNA_pucker
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1  0.00  NotAvailable       ?        11   62.610  27  0.83  41  0.88  molprobity  1.000  
 2   2  0.33  Rotameric          ?        11   55.120  22  0.55  34  0.95  molprobity  1.000  
 3   3  0.81  Rotameric          ?        11   64.120  26  0.47  41  0.80  molprobity  1.000  
 4   4  0.58  Rotameric          ?        11   60.410  26  0.55  41  0.91  molprobity  1.000  
 5   5  0.03  Rotameric          ?        11   68.210  26  0.61  41  1.41  molprobity  1.000  
 6   6  0.55  Rotameric          ?        11   55.800  25  0.46  39  1.49  molprobity  1.000  
 7   7  0.38  Rotameric          ?        11   49.600  26  0.49  41  0.94  molprobity  1.000  
 8   8  0.00  Triaged/NotBinned  ?        10   68.530  22  0.64  34  1.06  molprobity  1.000  
 9   9  0.03  Rotameric          ?        11   56.300  26  0.42  41  1.03  molprobity  1.000  
10  10  0.00  Triaged/NotBinned  ?        11   72.030  26  0.53  41  0.90  molprobity  1.000  
11  11  0.84  Rotameric          ?        11   92.210  22  0.63  34  1.18  molprobity  1.000  
12  12  0.82  Rotameric          ?        11   97.150  26  0.50  41  1.01  molprobity  1.000  
13  13  0.59  Rotameric          ?        11   85.560  25  0.31  39  1.37  molprobity  1.000  
14  14  0.74  Rotameric          ?        11   99.940  25  0.58  39  1.20  molprobity  1.000  
15  15  0.53  Rotameric          ?        12   86.410  24  0.59  35  1.06  molprobity  1.000  
16  16  0.00  NotAvailable       ?        11  157.170  26  0.66  41  0.98  molprobity  1.000  
17  17  0.00  Triaged/NotBinned  ?        11  142.090  26  0.43  41  1.38  molprobity  1.000  
18  18  0.00  NonRotameric       ?        10  119.150  22  0.56  34  1.17  molprobity  1.000  
19  19  0.00  Triaged/NotBinned  ?        11   59.030  25  0.48  39  0.98  molprobity  1.000  
20  20  0.45  Rotameric          ?        11   65.180  26  0.38  41  1.17  molprobity  1.000  
21  21  0.10  Rotameric          ?        11   96.630  25  0.67  39  1.22  molprobity  1.000  
22  22  0.00  Triaged/NotBinned  ?        11   63.670  22  0.42  34  1.62  molprobity  1.000  
23  23  0.83  Rotameric          ?        11   63.580  26  0.45  41  1.41  molprobity  1.000  
24  24  0.93  Rotameric          ?        11   65.410  22  0.37  34  1.21  molprobity  1.000  
25  25  0.75  Rotameric          ?        11   64.900  25  0.44  39  1.14  molprobity  1.000  
26  26  0.73  Rotameric          ?        11   77.040  22  0.51  34  1.36  molprobity  1.000  
27  27  0.95  Rotameric          ?        11   88.550  22  0.66  34  0.97  molprobity  1.000  
28  28  0.77  Rotameric          ?        11   89.830  25  0.55  39  1.00  molprobity  1.000  
29  29  0.73  Rotameric          ?        11   95.610  26  0.54  41  1.07  molprobity  1.000  
30  30  0.74  Rotameric          ?        11  130.900  25  0.41  39  1.02  molprobity  1.000  
31  31  0.77  Rotameric          ?        10  178.680  22  0.46  34  0.95  molprobity  1.000  
32  32  0.18  Rotameric          ?        11  216.060  21  0.55  30  0.99  molprobity  1.000  
33  33  0.00  NotAvailable       outlier  11  166.730  26  0.83  41  1.26  molprobity  1.000  
34  34  0.00  Triaged/NotBinned  ?        11  167.110  26  0.69  41  1.17  molprobity  1.000  
35  35  0.00  Triaged/NotBinned  ?        10  147.830  22  0.41  34  0.91  molprobity  1.000  
36  36  0.87  Rotameric          ?        10  130.510  22  0.54  34  0.80  molprobity  1.000  
37  37  0.83  Rotameric          ?        11   95.880  22  0.46  34  0.86  molprobity  1.000  
38  38  0.87  Rotameric          ?        10   89.010  22  0.49  34  0.84  molprobity  1.000  
39  39  0.76  Rotameric          ?        11   78.190  26  0.68  41  1.01  molprobity  1.000  
40  40  0.97  Rotameric          ?        11   52.380  26  0.59  41  1.08  molprobity  1.000  
41  41  0.88  Rotameric          ?        11   50.320  22  0.55  34  1.20  molprobity  1.000  
42  42  0.32  Rotameric          ?        11   35.300  26  0.43  41  1.44  molprobity  1.000  
43  43  0.58  Rotameric          ?        11   35.060  22  0.57  34  1.48  molprobity  1.000  
44  44  0.94  Rotameric          ?        11   42.330  22  0.60  34  0.85  molprobity  1.000  
45  45  0.89  Rotameric          ?        11   44.170  26  0.51  41  1.64  molprobity  1.000  
46  46  0.42  Rotameric          ?        11   56.730  22  0.56  34  1.92  molprobity  1.000  
47  47  0.01  Rotameric          ?        11   48.380  25  0.48  39  1.35  molprobity  1.000  
48  48  0.08  Rotameric          ?        11   44.970  25  0.46  39  1.41  molprobity  1.000  
49  49  0.00  Triaged/NotBinned  ?        11   56.950  26  0.49  41  1.31  molprobity  1.000  
50  50  0.00  Triaged/NotBinned  ?        11   47.350  26  0.44  41  1.34  molprobity  1.000  
51  51  0.31  Rotameric          ?        10   53.290  22  0.87  34  1.89  molprobity  1.000  
52  52  0.18  Rotameric          ?        11   59.520  26  0.66  41  1.73  molprobity  1.000  
53  53  0.00  NonRotameric       ?        10   64.330  22  0.50  34  1.27  molprobity  1.000  
54  54  0.00  Triaged/NotBinned  ?        11   43.750  26  0.59  41  1.22  molprobity  1.000  
55  55  0.01  Rotameric          ?        11   39.660  22  0.36  34  1.29  molprobity  1.000  
56  56  0.00  Triaged/NotBinned  ?        11   59.930  26  0.53  41  1.02  molprobity  1.000  
57  57  0.93  Rotameric          ?        11   89.520  25  0.55  39  0.94  molprobity  1.000  
58  58  0.01  Rotameric          ?        11  131.410  26  0.65  41  0.93  molprobity  1.000  
59  59  0.53  Rotameric          ?        10  144.000  22  0.55  34  0.85  molprobity  1.000  
60  60  0.90  Rotameric          ?        10  180.960  22  0.44  34  1.00  molprobity  1.000  
61  61  0.00  NonRotameric       ?        11  151.190  22  0.60  34  0.67  molprobity  1.000  
62  62  0.92  Rotameric          ?        11  161.330  25  0.54  39  0.85  molprobity  1.000  
63  63  0.41  Rotameric          ?        11  128.940  25  0.43  39  0.73  molprobity  1.000  
64  64  0.54  Rotameric          ?        11   78.230  26  0.45  41  1.06  molprobity  1.000  
65  65  0.07  Rotameric          ?        10   86.120  22  0.64  34  1.16  molprobity  1.000  
66  66  0.38  Rotameric          ?        11  111.410  22  0.63  34  0.74  molprobity  1.000  
67  67  0.89  Rotameric          ?        10  109.570  22  0.65  34  1.09  molprobity  1.000  
68  68  0.92  Rotameric          ?        11   94.630  22  0.56  34  0.79  molprobity  1.000  
69  69  0.97  Rotameric          ?        11   73.510  26  0.49  41  1.05  molprobity  1.000  
70  70  0.63  Rotameric          ?        11   52.280  22  0.52  34  1.04  molprobity  1.000  
71  71  0.48  Rotameric          ?        11   47.410  22  0.52  34  1.29  molprobity  1.000  
72  72  0.88  Rotameric          ?        10   39.710  22  0.33  34  1.11  molprobity  1.000  
73  73  0.87  Rotameric          ?        11   56.140  22  0.52  34  1.62  molprobity  1.000  
74  74  0.00  NonRotameric       ?        11   61.990  22  0.38  34  1.66  molprobity  1.000  
75  75  0.25  Rotameric          ?        11   67.280  22  0.52  34  1.16  molprobity  1.000  
76  76  0.63  Rotameric          ?        11   59.730  26  0.53  41  1.42  molprobity  1.000  
77  77  0.30  Rotameric          ?        11   53.480  22  0.67  34  1.31  molprobity  1.000  
78  78  0.00  Triaged/NotBinned  outlier  11   50.550  25  0.35  39  1.24  molprobity  1.000  
79  79  0.00  Triaged/NotBinned  ?        11   64.200  22  0.40  34  1.08  molprobity  1.000  
80  80  0.00  NonRotameric       ?        11   75.190  22  0.45  34  1.30  molprobity  1.000  
81  81  0.00  NonRotameric       ?        12  137.280  24  0.42  35  0.75  molprobity  1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   9  "H2'"    1  0.66  2.11  
 2   9  N3       1  0.66  2.11  
 3   9  N3       2  0.48  2.77  
 4   9  "C2'"    2  0.48  2.77  
 5  10  N2       3  0.58  2.17  
 6  24  "H2'"    4  0.43  2.18  
 7  25  "H1'"    3  0.58  2.17  
 8  25  "O4'"    4  0.43  2.18  
 9  50  H8       5  0.46  1.80  
10  50  "H5''"   5  0.46  1.80  
11  50  "H2'"    6  0.45  2.17  
12  51  "O4'"    6  0.45  2.17  
13  54  "H2'"    7  0.41  2.20  
14  55  "H2'"    8  0.45  2.17  
15  55  "C2'"    9  0.43  2.66  
16  55  "O5'"    7  0.41  2.20  
17  56  "O5'"    8  0.45  2.17  
18  56  "O5'"    9  0.43  2.66  
19  71  "H2'"   10  0.44  2.52  
20  72  C6      10  0.44  2.52  
21  78  N3      11  0.45  2.32  
22  78  "H5''"  11  0.45  2.32  
23  78  "H4'"   12  0.41  2.21  
24  78  OP1     12  0.41  2.21  
25  79  "H2'"   13  0.74  1.86  
26  79  O2      13  0.74  1.86  
27  79  O2      14  0.56  2.54  
28  79  "C2'"   14  0.56  2.54  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
 1   5  "O3'"  P      "O5'"   95.829  104.000  1.500  -5.45  Y     
 2   6  "O3'"  P      "O5'"   95.031  104.000  1.500  -5.98  Y     
 3  17  "O3'"  P      "O5'"   94.580  104.000  1.500  -6.28  Y     
 4  22  "O3'"  P      "O5'"   94.757  104.000  1.500  -6.16  Y     
 5  26  "C4'"  "C3'"  "O3'"  105.472  113.000  1.500  -5.02  ?     
 6  45  "C2'"  "C3'"  "O3'"  103.824  113.700  1.500  -6.58  ?     
 7  45  "C1'"  "C2'"  "O2'"  116.347  108.400  1.500   5.30  ?     
 8  46  "O3'"  P      "O5'"   86.501  104.000  1.900  -9.21  Y     
 9  51  "C3'"  "C2'"  "O2'"  118.956  110.700  1.500   5.50  ?     
10  51  "C4'"  "C3'"  "O3'"  104.904  113.000  1.500  -5.40  ?     
11  52  "C2'"  "C3'"  "O3'"  103.647  113.700  1.500  -6.70  ?     
12  74  "O3'"  P      "O5'"   95.184  104.000  1.500  -5.88  Y     
13  76  "O3'"  P      "O5'"   95.014  104.000  1.500  -5.99  Y     
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
_pdbx_vrpt_model_instance_density.EDIAm
_pdbx_vrpt_model_instance_density.OPIA
 1   1  24  0.886  0.166   2.352  0.336  33.330  
 2   2  20  0.825  0.184   2.637  0.593  25.000  
 3   3  23  0.758  0.220   4.111  0.280   8.700  
 4   4  23  0.774  0.246   4.958  0.449  13.040  
 5   5  23  0.712  0.296   6.586  0.456  21.740  
 6   6  22  0.835  0.184   2.526  0.535   9.090  
 7   7  23  0.848  0.179   2.775  0.305   8.700  
 8   8  20  0.822  0.323   6.065  0.117  10.000  
 9   9  23  0.856  0.251   5.121  0.446  21.740  
10  10  23  0.784  0.312   7.107  0.193   4.350  
11  11  20  0.717  0.314   6.565  0.259   0.000  
12  12  23  0.828  0.237   4.664  0.148   4.350  
13  13  22  0.904  0.362   7.731  0.063   0.000  
14  14  22  0.873  0.275   5.187  0.063   0.000  
15  15  22  0.757  0.277   5.246  0.150  18.180  
16  16  23  0.855  0.588  16.098  0.006   0.000  
17  17  23  0.777  0.410  10.300  0.034   0.000  
18  18  20  0.691  0.524  11.512  0.043   0.000  
19  19  22  0.775  0.320   6.503  0.150   9.090  
20  20  23  0.898  0.240   4.762  0.146   8.700  
21  21  22  0.770  0.400   8.842  0.050   4.550  
22  22  20  0.769  0.313   6.535  0.248   5.000  
23  23  23  0.778  0.301   6.749  0.338   4.350  
24  24  20  0.676  0.324   6.867  0.471  20.000  
25  25  22  0.656  0.282   5.392  0.330   9.090  
26  26  20  0.753  0.302   6.202  0.192   5.000  
27  27  20  0.731  0.292   5.900  0.143   5.000  
28  28  22  0.811  0.201   3.023  0.255  13.640  
29  29  23  0.767  0.211   3.818  0.328   8.700  
30  30  22  0.576  0.267   4.953  0.091   0.000  
31  31  20  0.493  0.304   5.550  0.015   0.000  
32  32  20  0.341  0.542  12.000  0.000   0.000  
33  33  23  0.738  0.446  11.472  0.014   0.000  
34  34  23  0.618  0.408  10.235  0.016   0.000  
35  35  20  0.687  0.824  19.642  0.000   0.000  
36  36  20  0.760  0.870  20.889  0.003   0.000  
37  37  20  0.750  0.318   6.686  0.055  15.000  
38  38  20  0.822  0.275   4.764  0.076   5.000  
39  39  23  0.905  0.222   4.176  0.127   8.700  
40  40  23  0.860  0.252   5.153  0.336  17.390  
41  41  20  0.873  0.232   4.088  0.184   5.000  
42  42  23  0.890  0.181   2.840  0.256  21.740  
43  43  20  0.817  0.226   3.906  0.601  45.000  
44  44  20  0.793  0.279   5.508  0.275  20.000  
45  45  23  0.820  0.252   5.153  0.200   8.700  
46  46  20  0.801  0.293   5.931  0.102   5.000  
47  47  22  0.884  0.270   5.041  0.079   9.090  
48  48  22  0.831  0.304   6.035  0.095   4.550  
49  49  23  0.819  0.426  10.821  0.044   0.000  
50  50  23  0.780  0.218   4.046  0.393   4.350  
51  51  20  0.885  0.196   2.623  0.101  15.000  
52  52  23  0.878  0.363   8.769  0.091   4.350  
53  53  20  0.872  0.230   3.545  0.110   5.000  
54  54  23  0.904  0.166   2.352  0.433  26.090  
55  55  20  0.942  0.147   1.520  0.170  10.000  
56  56  23  0.860  0.199   3.427  0.182   8.700  
57  57  22  0.678  0.289   5.596  0.139   4.550  
58  58  23  0.614  0.296   6.586  0.042   0.000  
59  59  20  0.441  0.296   5.333  0.149   0.000  
60  60  20  0.251  0.415   8.558  0.021   0.000  
61  61  20  0.072  0.641  16.444  0.009   0.000  
62  62  22  0.429  0.536  12.819  0.024   0.000  
63  63  22  0.754  0.268   4.982  0.070   4.550  
64  64  23  0.845  0.228   4.371  0.145  13.040  
65  65  20  0.863  0.319   5.957  0.085  10.000  
66  66  20  0.822  0.283   5.628  0.082   0.000  
67  67  20  0.818  0.354   6.905  0.053   5.000  
68  68  20  0.766  0.427   9.979  0.038   0.000  
69  69  23  0.806  0.255   5.251  0.098  13.040  
70  70  20  0.848  0.210   3.423  0.060  10.000  
71  71  20  0.874  0.190   2.819  0.201   5.000  
72  72  20  0.899  0.155   1.512  0.372  10.000  
73  73  20  0.833  0.192   2.879  0.385  20.000  
74  74  20  0.787  0.249   4.601  0.480  20.000  
75  75  20  0.684  0.309   6.414  0.263  15.000  
76  76  23  0.783  0.295   6.554  0.393  21.740  
77  77  20  0.781  0.312   6.505  0.171   0.000  
78  78  22  0.900  0.203   3.082  0.340   4.550  
79  79  20  0.893  0.290   5.840  0.170  10.000  
80  80  20  0.868  0.265   5.085  0.124   0.000  
81  81  22  0.816  1.203  32.322  0.003   0.000  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity           "4-5-2 with Phenix2.0rc1"                                             Y  
2  eds                  3.0                                                                   Y  
3  dcc                  '"2.31  (2025-03-10))"'                                               Y  
4  xtriage              2.0rc1                                                                Y  
5  percentiles          "20231227.v01 (using entries in the PDB archive December 27th 2023)"  Y  
6  validation-pipeline  2.44                                                                  Y  
##
