data_8Z8U

_audit_conform.dict_name      mmcif_pdbx_vrpt.dic
_audit_conform.dict_version   0.068
_audit_conform.dict_location  https://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx_vrpt.dic
#
_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  8Z8U
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    8Z8U
_pdbx_vrpt_summary.PDB_deposition_date         2024-04-22
_pdbx_vrpt_summary.PDB_revision_number         1
_pdbx_vrpt_summary.PDB_revision_date           2025-03-19
_pdbx_vrpt_summary.RNA_suiteness               0.67
_pdbx_vrpt_summary.report_creation_date        2025-03-10:13:15
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds_mogul,validation_schema,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "RNA (41-MER)"  
2  non-polymer  "SULFATE ION"  
3  non-polymer  "SODIUM ION"  
4  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  1  
C  2  
D  3  
E  2  
F  2  
G  2  
H  3  
I  4  
J  4  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  2.71  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
4  RNAsuiteness_percent   
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1  36.18  180529     ?     ?  
2  2  1  58.82    4439  2.70  2.74  
3  1  2  75.97  164620     ?     ?  
4  2  2  76.20    4050  2.70  2.74  
5  1  3  36.31  164625     ?     ?  
6  2  3  69.48    4050  2.70  2.74  
7  1  4  78.16    3690     ?     ?  
8  2  4  85.25    1051  2.48  2.96  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A   59.33  
2  4  2  A  1  1  A   58.54  
3  3  2  B  1  1  B  100.00  
4  4  2  B  1  1  B  100.00  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  0.86  0.45  986  1536  
2  1  1  B  B  0.88  0.44  986  1536  
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       7.09
_pdbx_vrpt_summary_geometry.num_H_reduce     894
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   1972
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.44
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  3072
_pdbx_vrpt_summary_geometry.angles_RMSZ      0.87
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            67.841
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         53.687
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.34(2.73A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        19633
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.394
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.525
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.363
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.920
_pdbx_vrpt_summary_diffraction.DCC_R                     0.2200
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.2456
_pdbx_vrpt_summary_diffraction.EDS_R                     0.2305
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.71
_pdbx_vrpt_summary_diffraction.EDS_res_low               44.59
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[71.370,71.370,29.858,-0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.722
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 7.31% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         2
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         99.45
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      966
_pdbx_vrpt_summary_diffraction.percent_free_reflections  4.89
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     1.22
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.71
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        44.59
_pdbx_vrpt_summary_diffraction.PDB_R                     0.2203
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.2463
_pdbx_vrpt_summary_diffraction.density_fitness_version   1.0.11
_pdbx_vrpt_summary_diffraction.CCP4_version              "9.0.004 (Gargrove)"
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_symm_clashes
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.ligand_of_interest
  1  1  1  A   1  G    A    1  .  ?        ?     ?     ?     ?  ?     
  2  1  1  A   2  G    A    2  .  ?        ?     ?     ?     ?  ?     
  3  1  1  A   3  G    A    3  .  ?        ?     ?     ?     ?  ?     
  4  1  1  A   4  C    A    4  .  ?        ?     ?     ?     ?  ?     
  5  1  1  A   5  A    A    5  .  ?        ?     ?     ?     ?  ?     
  6  1  1  A   6  G    A    6  .  ?        ?     1     ?     ?  ?     
  7  1  1  A   7  A    A    7  .  ?        ?     1     ?     ?  ?     
  8  1  1  A   8  G    A    8  .  ?        ?     ?     ?     ?  ?     
  9  1  1  A   9  C    A    9  .  ?        ?     ?     ?     ?  ?     
 10  1  1  A  10  C    A   10  .  ?        ?     1     ?     ?  ?     
 11  1  1  A  11  C    A   11  .  ?        ?     1     ?     ?  ?     
 12  1  1  A  12  A    A   12  .  ?        ?     ?     ?     ?  ?     
 13  1  1  A  13  A    A   13  .  ?        ?     ?     ?     ?  ?     
 14  1  1  A  14  C    A   14  .  ?        ?     ?     ?     ?  ?     
 15  1  1  A  15  A    A   15  .  ?        ?     2     ?     ?  ?     
 16  1  1  A  16  C    A   16  .  ?        ?     2     ?     ?  ?     
 17  1  1  A  17  A    A   17  .  ?        ?     ?     ?     ?  ?     
 18  1  1  A  18  G    A   18  .  ?        ?     ?     ?     ?  ?     
 19  1  1  A  19  C    A   19  .  ?        ?     ?     ?     ?  ?     
 20  1  1  A  20  G    A   20  .  ?        ?     ?     ?     ?  ?     
 21  1  1  A  21  A    A   21  .  ?        ?     ?     ?     ?  ?     
 22  1  1  A  22  A    A   22  .  ?        ?     ?     ?     ?  ?     
 23  1  1  A  23  A    A   23  .  ?        ?     ?     ?     ?  ?     
 24  1  1  A  24  G    A   24  .  ?        ?     ?     ?     ?  ?     
 25  1  1  A  25  C    A   25  .  ?        ?     ?     ?     ?  ?     
 26  1  1  A  26  U    A   26  .  ?        ?     ?     ?     ?  ?     
 27  1  1  A  27  G    A   27  .  ?        ?     ?     ?     ?  ?     
 28  1  1  A  28  U    A   28  .  ?        ?     ?     ?     ?  ?     
 29  1  1  A  29  G    A   29  .  ?        ?     1     ?     ?  ?     
 30  1  1  A  30  G    A   30  .  ?        ?     1     ?     ?  ?     
 31  1  1  A  31  C    A   31  .  ?        ?     ?     ?     ?  ?     
 32  1  1  A  32  U    A   32  .  ?        ?     1     ?     ?  ?     
 33  1  1  A  33  A    A   33  .  ?        ?     1     ?     ?  ?     
 34  1  1  A  34  G    A   34  .  ?        ?     1     ?     ?  ?     
 35  1  1  A  35  A    A   35  .  ?        ?     1     ?     ?  ?     
 36  1  1  A  36  C    A   36  .  ?        ?     ?     ?     ?  ?     
 37  1  1  A  37  U    A   37  .  ?        ?     ?     ?     ?  ?     
 38  1  1  A  38  G    A   38  .  ?        ?     ?     ?     ?  ?     
 39  1  1  A  39  U    A   39  .  ?        ?     2     ?     ?  ?     
 40  1  1  A  40  C    A   40  .  ?        ?     2     ?     ?  ?     
 41  1  1  A  41  C    A   41  .  ?        ?     ?     ?     ?  ?     
 42  1  1  B   1  G    B    1  .  ?        ?     ?     ?     ?  ?     
 43  1  1  B   2  G    B    2  .  ?        ?     ?     ?     ?  ?     
 44  1  1  B   3  G    B    3  .  ?        ?     ?     ?     ?  ?     
 45  1  1  B   4  C    B    4  .  ?        ?     ?     ?     ?  ?     
 46  1  1  B   5  A    B    5  .  ?        ?     ?     ?     ?  ?     
 47  1  1  B   6  G    B    6  .  ?        ?     1     ?     ?  ?     
 48  1  1  B   7  A    B    7  .  ?        ?     1     ?     ?  ?     
 49  1  1  B   8  G    B    8  .  ?        ?     1     ?     ?  ?     
 50  1  1  B   9  C    B    9  .  ?        ?     1     ?     ?  ?     
 51  1  1  B  10  C    B   10  .  ?        ?     1     ?     ?  ?     
 52  1  1  B  11  C    B   11  .  ?        ?     ?     ?     ?  ?     
 53  1  1  B  12  A    B   12  .  ?        ?     ?     ?     ?  ?     
 54  1  1  B  13  A    B   13  .  ?        ?     ?     ?     ?  ?     
 55  1  1  B  14  C    B   14  .  ?        ?     ?     ?     ?  ?     
 56  1  1  B  15  A    B   15  .  ?        ?     2     ?     ?  ?     
 57  1  1  B  16  C    B   16  .  ?        ?     2     ?     ?  ?     
 58  1  1  B  17  A    B   17  .  ?        ?     ?     ?     ?  ?     
 59  1  1  B  18  G    B   18  .  ?        ?     ?     ?     ?  ?     
 60  1  1  B  19  C    B   19  .  ?        ?     ?     ?     ?  ?     
 61  1  1  B  20  G    B   20  .  ?        ?     ?     ?     ?  ?     
 62  1  1  B  21  A    B   21  .  ?        ?     ?     ?     ?  ?     
 63  1  1  B  22  A    B   22  .  ?        ?     1     ?     ?  ?     
 64  1  1  B  23  A    B   23  .  ?        ?     1     ?     ?  ?     
 65  1  1  B  24  G    B   24  .  ?        ?     ?     ?     ?  ?     
 66  1  1  B  25  C    B   25  .  ?        ?     ?     ?     ?  ?     
 67  1  1  B  26  U    B   26  .  ?        1     ?     ?     ?  ?     
 68  1  1  B  27  G    B   27  .  ?        ?     ?     ?     ?  ?     
 69  1  1  B  28  U    B   28  .  ?        ?     ?     ?     ?  ?     
 70  1  1  B  29  G    B   29  .  ?        ?     1     ?     ?  ?     
 71  1  1  B  30  G    B   30  .  ?        ?     1     ?     ?  ?     
 72  1  1  B  31  C    B   31  .  ?        ?     ?     ?     ?  ?     
 73  1  1  B  32  U    B   32  .  ?        ?     ?     ?     ?  ?     
 74  1  1  B  33  A    B   33  .  ?        ?     1     ?     ?  ?     
 75  1  1  B  34  G    B   34  .  ?        ?     1     ?     ?  ?     
 76  1  1  B  35  A    B   35  .  ?        ?     1     ?     ?  ?     
 77  1  1  B  36  C    B   36  .  ?        ?     1     ?     ?  ?     
 78  1  1  B  37  U    B   37  .  ?        ?     1     ?     ?  ?     
 79  1  1  B  38  G    B   38  .  ?        ?     ?     ?     ?  ?     
 80  1  1  B  39  U    B   39  .  ?        ?     1     ?     ?  ?     
 81  1  1  B  40  C    B   40  .  ?        ?     1     ?     ?  ?     
 82  1  1  B  41  C    B   41  .  ?        ?     ?     ?     ?  ?     
 83  1  2  C   .  SO4  A  101  .  ?        ?     ?     ?     ?  ?     
 84  1  3  D   .  NA   A  102  .  ?        ?     ?     ?     ?  Y     
 85  1  2  E   .  SO4  B  101  .  ?        ?     ?     ?     ?  ?     
 86  1  2  F   .  SO4  B  102  .  ?        ?     ?    20     2  ?     
 87  1  2  G   .  SO4  B  103  .  ?        ?     ?     ?     ?  ?     
 88  1  3  H   .  NA   B  104  .  ?        ?     ?     ?     ?  Y     
 89  1  4  I   .  HOH  A  201  .  ?        ?     ?     ?     ?  ?     
 90  1  4  I   .  HOH  A  202  .  ?        ?     ?     ?     ?  ?     
 91  1  4  I   .  HOH  A  203  .  ?        ?     ?     ?     ?  ?     
 92  1  4  I   .  HOH  A  204  .  ?        ?     ?     ?     ?  ?     
 93  1  4  I   .  HOH  A  205  .  ?        ?     ?     ?     ?  ?     
 94  1  4  I   .  HOH  A  206  .  ?        ?     ?     ?     ?  ?     
 95  1  4  I   .  HOH  A  207  .  ?        ?     ?     ?     ?  ?     
 96  1  4  I   .  HOH  A  208  .  ?        ?     ?     ?     ?  ?     
 97  1  4  I   .  HOH  A  209  .  ?        ?     ?     ?     ?  ?     
 98  1  4  I   .  HOH  A  210  .  ?        ?     ?     ?     ?  ?     
 99  1  4  J   .  HOH  B  201  .  ?        ?     ?     ?     ?  ?     
100  1  4  J   .  HOH  B  202  .  ?        ?     ?     ?     ?  ?     
101  1  4  J   .  HOH  B  203  .  ?        ?     ?     ?     ?  ?     
102  1  4  J   .  HOH  B  204  .  ?        ?     ?     ?     ?  ?     
103  1  4  J   .  HOH  B  205  .  ?        ?     ?     ?     ?  ?     
104  1  4  J   .  HOH  B  206  .  ?        ?     ?     ?     ?  ?     
105  1  4  J   .  HOH  B  207  .  ?        ?     ?     ?     ?  ?     
106  1  4  J   .  HOH  B  208  .  ?        ?     ?     ?     ?  ?     
107  1  4  J   .  HOH  B  209  .  ?        ?     ?     ?     ?  ?     
108  1  4  J   .  HOH  B  210  .  ?        ?     ?     ?     ?  ?     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.RNA_score
_pdbx_vrpt_model_instance_geometry.RNA_suite
_pdbx_vrpt_model_instance_geometry.RNA_pucker
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
  1    1  0.00  NotAvailable       ?          11   88.770    26  0.31    41  0.74  molprobity  1.000  
  2    2  0.55  Rotameric          ?          11   89.250    26  0.31    41  0.77  molprobity  1.000  
  3    3  0.80  Rotameric          ?          11   83.950    26  0.27    41  0.64  molprobity  1.000  
  4    4  0.84  Rotameric          ?          11   79.850    22  0.22    34  0.70  molprobity  1.000  
  5    5  0.83  Rotameric          ?          11   71.700    25  0.40    39  0.65  molprobity  1.000  
  6    6  0.13  Rotameric          outlier    11   71.680    26  0.55    41  1.76  molprobity  1.000  
  7    7  0.00  Triaged/NotBinned  ?          11   48.250    25  0.37    39  0.87  molprobity  1.000  
  8    8  0.80  Rotameric          ?          11   44.370    26  0.57    41  0.85  molprobity  1.000  
  9    9  0.83  Rotameric          ?          11   46.060    22  0.76    34  0.97  molprobity  1.000  
 10   10  0.93  Rotameric          ?          11   54.190    22  0.43    34  1.15  molprobity  1.000  
 11   11  0.00  NonRotameric       ?          11   61.370    22  0.49    34  0.91  molprobity  1.000  
 12   12  0.43  Rotameric          ?          11   57.510    25  0.44    39  0.83  molprobity  1.000  
 13   13  0.76  Rotameric          ?          11   55.690    25  0.40    39  0.70  molprobity  1.000  
 14   14  0.96  Rotameric          ?          11   55.000    22  0.44    34  0.69  molprobity  1.000  
 15   15  0.93  Rotameric          ?          11   62.330    25  0.51    39  0.84  molprobity  1.000  
 16   16  0.01  Rotameric          ?          11   63.340    22  0.44    34  0.84  molprobity  1.000  
 17   17  0.15  Rotameric          ?          11   64.090    25  0.83    39  1.37  molprobity  1.000  
 18   18  0.66  Rotameric          ?          11   64.290    26  0.49    41  0.87  molprobity  1.000  
 19   19  0.91  Rotameric          ?          11   64.130    22  0.65    34  0.90  molprobity  1.000  
 20   20  0.87  Rotameric          ?          11   63.630    26  0.42    41  0.88  molprobity  1.000  
 21   21  0.71  Rotameric          ?          11   57.670    25  0.47    39  0.72  molprobity  1.000  
 22   22  0.69  Rotameric          ?          11   61.110    25  0.57    39  0.97  molprobity  1.000  
 23   23  0.74  Rotameric          ?          11   62.160    25  0.52    39  0.63  molprobity  1.000  
 24   24  0.50  Rotameric          ?          11   60.000    26  0.51    41  0.84  molprobity  1.000  
 25   25  0.51  Rotameric          ?          11   57.090    22  0.58    34  1.13  molprobity  1.000  
 26   26  0.97  Rotameric          ?          10   58.010    22  0.40    34  0.86  molprobity  1.000  
 27   27  0.91  Rotameric          ?          11   58.670    26  0.36    41  0.55  molprobity  1.000  
 28   28  0.67  Rotameric          ?          10   55.900    22  0.49    34  0.72  molprobity  1.000  
 29   29  0.72  Rotameric          ?          11   53.590    26  0.43    41  0.66  molprobity  1.000  
 30   30  0.24  Rotameric          ?          11   50.800    26  0.62    41  1.07  molprobity  1.000  
 31   31  0.02  Rotameric          ?          11   56.330    22  0.37    34  0.72  molprobity  1.000  
 32   32  0.96  Rotameric          ?          10   58.890    22  0.23    34  0.73  molprobity  1.000  
 33   33  0.95  Rotameric          ?          11   63.250    25  0.35    39  0.78  molprobity  1.000  
 34   34  0.91  Rotameric          ?          11   68.960    26  0.39    41  0.90  molprobity  1.000  
 35   35  0.24  Rotameric          ?          11   74.880    25  0.31    39  0.62  molprobity  1.000  
 36   36  0.75  Rotameric          ?          11   74.540    22  0.26    34  0.57  molprobity  1.000  
 37   37  0.89  Rotameric          ?          10   77.850    22  0.28    34  0.72  molprobity  1.000  
 38   38  0.86  Rotameric          ?          11   79.900    26  0.22    41  0.72  molprobity  1.000  
 39   39  0.80  Rotameric          ?          10   83.350    22  0.19    34  0.64  molprobity  1.000  
 40   40  0.88  Rotameric          ?          11   93.190    22  0.21    34  0.81  molprobity  1.000  
 41   41  0.82  Rotameric          ?          12  101.960    21  0.18    30  0.76  molprobity  1.000  
 42   42  0.00  NotAvailable       ?          11   93.850    26  0.24    41  0.57  molprobity  1.000  
 43   43  0.58  Rotameric          ?          11   82.270    26  0.30    41  0.87  molprobity  1.000  
 44   44  0.84  Rotameric          ?          11   75.210    26  0.25    41  0.64  molprobity  1.000  
 45   45  0.82  Rotameric          ?          11   64.110    22  0.34    34  0.64  molprobity  1.000  
 46   46  0.89  Rotameric          ?          11   54.870    25  0.42    39  0.74  molprobity  1.000  
 47   47  0.64  Rotameric          ?          11   54.940    26  0.46    41  1.13  molprobity  1.000  
 48   48  0.03  Rotameric          ?          11   56.830    25  0.32    39  0.64  molprobity  1.000  
 49   49  0.09  Rotameric          ?          11   50.930    26  0.49    41  1.00  molprobity  1.000  
 50   50  0.84  Rotameric          ?          11   48.430    22  0.35    34  1.25  molprobity  1.000  
 51   51  0.84  Rotameric          ?          11   44.560    22  0.42    34  0.98  molprobity  1.000  
 52   52  0.07  Rotameric          ?          11   43.080    22  0.40    34  0.78  molprobity  1.000  
 53   53  0.46  Rotameric          ?          11   47.370    25  0.50    39  1.03  molprobity  1.000  
 54   54  0.77  Rotameric          ?          11   47.900    25  0.41    39  0.68  molprobity  1.000  
 55   55  0.97  Rotameric          ?          11   50.360    22  0.53    34  0.90  molprobity  1.000  
 56   56  0.92  Rotameric          ?          11   47.970    25  0.50    39  0.96  molprobity  1.000  
 57   57  0.00  NonRotameric       ?          11   46.870    22  0.71    34  1.35  molprobity  1.000  
 58   58  0.00  NonRotameric       ?          11   50.710    25  0.50    39  0.67  molprobity  1.000  
 59   59  0.79  Rotameric          ?          11   54.080    26  0.39    41  0.77  molprobity  1.000  
 60   60  0.72  Rotameric          ?          11   55.900    22  0.48    34  1.01  molprobity  1.000  
 61   61  0.89  Rotameric          ?          11   58.540    26  0.73    41  1.09  molprobity  1.000  
 62   62  0.69  Rotameric          ?          11   62.910    25  0.56    39  0.70  molprobity  1.000  
 63   63  0.62  Rotameric          ?          11   63.820    25  0.52    39  0.70  molprobity  1.000  
 64   64  0.74  Rotameric          ?          11   58.210    25  0.50    39  0.92  molprobity  1.000  
 65   65  0.45  Rotameric          ?          11   56.110    26  0.63    41  1.34  molprobity  1.000  
 66   66  0.45  Rotameric          ?          11   54.670    22  0.57    34  0.79  molprobity  1.000  
 67   67  0.94  Rotameric          ?          10   52.380    22  0.44    34  1.22  molprobity  1.000  
 68   68  0.92  Rotameric          ?          11   44.730    26  0.54    41  0.72  molprobity  1.000  
 69   69  0.91  Rotameric          ?          10   47.030    22  0.33    34  0.73  molprobity  1.000  
 70   70  0.65  Rotameric          ?          11   44.680    26  0.41    41  0.78  molprobity  1.000  
 71   71  0.00  Triaged/NotBinned  ?          11   56.860    26  0.38    41  0.76  molprobity  1.000  
 72   72  0.63  Rotameric          ?          11   63.330    22  0.43    34  0.76  molprobity  1.000  
 73   73  0.96  Rotameric          ?          10   68.240    22  0.25    34  0.76  molprobity  1.000  
 74   74  0.94  Rotameric          ?          11   69.870    25  0.30    39  0.81  molprobity  1.000  
 75   75  0.94  Rotameric          ?          11   72.530    26  0.33    41  0.64  molprobity  1.000  
 76   76  0.19  Rotameric          ?          11   70.880    25  0.42    39  1.17  molprobity  1.000  
 77   77  0.73  Rotameric          ?          11   65.480    22  0.46    34  0.87  molprobity  1.000  
 78   78  0.86  Rotameric          ?          10   65.440    22  0.36    34  0.70  molprobity  1.000  
 79   79  0.87  Rotameric          ?          11   69.790    26  0.41    41  0.73  molprobity  1.000  
 80   80  0.77  Rotameric          ?          10   76.420    22  0.22    34  0.81  molprobity  1.000  
 81   81  0.89  Rotameric          ?          11   79.170    22  0.23    34  0.56  molprobity  1.000  
 82   82  0.82  Rotameric          ?          12   89.750    21  0.16    30  0.74  molprobity  1.000  
 83   83     ?  ?                  ?           ?   90.660     4  0.15     6  0.15  mogul       1.000  
 84   84     ?  ?                  ?           ?   44.770     ?     ?     ?     ?  ?           1.000  
 85   85     ?  ?                  ?           ?   55.650     4  0.19     6  0.22  mogul       1.000  
 86   86     ?  ?                  ?           ?  120.250     4  0.15     6  1.90  mogul       0.900  
 87   87     ?  ?                  ?           ?   75.390     4  0.16     6  0.10  mogul       1.000  
 88   88     ?  ?                  ?           ?   62.740     ?     ?     ?     ?  ?           1.000  
 89   89     ?  ?                  ?           ?   51.680     ?     ?     ?     ?  ?           1.000  
 90   90     ?  ?                  ?           ?   53.880     ?     ?     ?     ?  ?           1.000  
 91   91     ?  ?                  ?           ?   50.550     ?     ?     ?     ?  ?           1.000  
 92   92     ?  ?                  ?           ?   55.200     ?     ?     ?     ?  ?           1.000  
 93   93     ?  ?                  ?           ?   65.140     ?     ?     ?     ?  ?           1.000  
 94   94     ?  ?                  ?           ?   63.460     ?     ?     ?     ?  ?           1.000  
 95   95     ?  ?                  ?           ?   46.310     ?     ?     ?     ?  ?           1.000  
 96   96     ?  ?                  ?           ?   62.290     ?     ?     ?     ?  ?           1.000  
 97   97     ?  ?                  ?           ?   56.660     ?     ?     ?     ?  ?           1.000  
 98   98     ?  ?                  ?           ?   37.640     ?     ?     ?     ?  ?           1.000  
 99   99     ?  ?                  ?           ?   46.260     ?     ?     ?     ?  ?           1.000  
100  100     ?  ?                  ?           ?   51.130     ?     ?     ?     ?  ?           1.000  
101  101     ?  ?                  ?           ?   40.510     ?     ?     ?     ?  ?           1.000  
102  102     ?  ?                  ?           ?   43.730     ?     ?     ?     ?  ?           1.000  
103  103     ?  ?                  ?           ?   48.710     ?     ?     ?     ?  ?           1.000  
104  104     ?  ?                  ?           ?   52.490     ?     ?     ?     ?  ?           1.000  
105  105     ?  ?                  ?           ?   57.770     ?     ?     ?     ?  ?           1.000  
106  106     ?  ?                  ?           ?   45.240     ?     ?     ?     ?  ?           1.000  
107  107     ?  ?                  ?           ?   38.170     ?     ?     ?     ?  ?           1.000  
108  108     ?  ?                  ?           ?   38.230     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   6  "H2'"   1  0.63  2.34  
 2   7  OP1     2  0.60  2.20  
 3  10  "H2'"   3  0.49  2.12  
 4  11  "O4'"   3  0.49  2.12  
 5  15  "C2'"   4  0.46  2.46  
 6  15  "O2'"   5  0.44  2.17  
 7  16  "H5'"   4  0.46  2.46  
 8  16  "H5'"   5  0.44  2.17  
 9  29  C6      6  0.43  3.06  
10  30  C6      6  0.43  3.06  
11  32  "H2'"   7  0.44  2.52  
12  33  C8      7  0.44  2.52  
13  34  "H2'"   8  0.51  2.45  
14  35  C8      8  0.51  2.45  
15  39  "H2'"   9  0.52  2.45  
16  39  "H2'"  10  0.41  1.84  
17  40  C6      9  0.52  2.45  
18  40  H6     10  0.41  1.84  
19  47  N2     11  0.41  2.88  
20  48  "H4'"  12  0.66  1.94  
21  49  OP2    12  0.66  1.94  
22  50  "H2'"  13  0.47  2.15  
23  51  "O4'"  13  0.47  2.15  
24  56  "O2'"  14  0.68  1.94  
25  56  "C2'"  15  0.58  2.33  
26  57  "H5'"  14  0.68  1.94  
27  57  "H5'"  15  0.58  2.33  
28  63  "H2'"  16  0.40  2.57  
29  64  C8     16  0.40  2.57  
30  70  "O2'"   2  0.60  2.20  
31  71  C8      1  0.63  2.34  
32  74  "H2'"  17  0.55  2.41  
33  75  C8     17  0.55  2.41  
34  76  "H2'"  18  0.51  2.45  
35  77  C6     18  0.51  2.45  
36  78  C2     11  0.41  2.88  
37  80  "H2'"  19  0.49  2.47  
38  81  C6     19  0.49  2.47  
#
loop_
_pdbx_vrpt_instance_symm_clashes.ordinal
_pdbx_vrpt_instance_symm_clashes.instance_id
_pdbx_vrpt_instance_symm_clashes.label_atom_id
_pdbx_vrpt_instance_symm_clashes.scid
_pdbx_vrpt_instance_symm_clashes.symop
_pdbx_vrpt_instance_symm_clashes.clashmag
_pdbx_vrpt_instance_symm_clashes.dist
 1  86  O1  0  1_555  1.16  1.04  
 2  86  O1  0  8_555  1.16  1.04  
 3  86  O3  1  1_555  0.84  1.36  
 4  86  O4  1  8_555  0.84  1.36  
 5  86  S   2  1_555  0.74  1.46  
 6  86  O3  2  8_555  0.74  1.46  
 7  86  S   3  1_555  0.74  1.46  
 8  86  O2  3  8_555  0.74  1.46  
 9  86  S   4  1_555  0.74  1.46  
10  86  O1  4  8_555  0.74  1.46  
11  86  S   5  1_555  0.74  1.46  
12  86  O4  5  8_555  0.74  1.46  
13  86  O1  6  1_555  0.71  1.49  
14  86  O2  6  8_555  0.71  1.49  
15  86  O2  7  1_555  0.53  1.67  
16  86  O4  7  8_555  0.53  1.67  
17  86  O3  8  1_555  0.33  1.87  
18  86  O3  8  8_555  0.33  1.87  
19  86  O2  9  1_555  0.24  1.96  
20  86  O3  9  8_555  0.24  1.96  
#
_pdbx_vrpt_instance_intra_angle_outliers.ordinal      1
_pdbx_vrpt_instance_intra_angle_outliers.instance_id  67
_pdbx_vrpt_instance_intra_angle_outliers.atom_1       OP2
_pdbx_vrpt_instance_intra_angle_outliers.atom_2       P
_pdbx_vrpt_instance_intra_angle_outliers.atom_3       "O3'"
_pdbx_vrpt_instance_intra_angle_outliers.obs          116.214
_pdbx_vrpt_instance_intra_angle_outliers.mean         105.200
_pdbx_vrpt_instance_intra_angle_outliers.stdev        2.200
_pdbx_vrpt_instance_intra_angle_outliers.Z            5.01
_pdbx_vrpt_instance_intra_angle_outliers.link         Y
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  86  O3  S  O1  125.92  109.31  109  5.22   3.18  0.97  
2  86  O4  S  O1   93.69  109.31  109  5.22  -2.99  3.95  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
_pdbx_vrpt_model_instance_density.EDIAm
_pdbx_vrpt_model_instance_density.OPIA
  1    1  23  0.867  0.135   1.428  0.565   13.040  
  2    2  23  0.936  0.102   0.270  0.623   21.740  
  3    3  23  0.933  0.111   0.586  0.522   21.740  
  4    4  20  0.925  0.111   0.480  0.567   20.000  
  5    5  22  0.946  0.101   0.147  0.596   22.730  
  6    6  23  0.892  0.158   2.235  0.507   13.040  
  7    7  22  0.938  0.128   1.026  0.634   13.640  
  8    8  23  0.961  0.109   0.516  0.645   26.090  
  9    9  20  0.960  0.109   0.413  0.614   25.000  
 10   10  20  0.951  0.114   0.581  0.602   30.000  
 11   11  20  0.925  0.137   1.352  0.583   20.000  
 12   12  22  0.954  0.091  -0.179  0.621    9.090  
 13   13  22  0.960  0.085  -0.375  0.642   18.180  
 14   14  20  0.951  0.090  -0.225  0.619   40.000  
 15   15  33  0.954  0.098   0.049  0.535   18.180  
 16   16  31  0.942  0.109   0.413  0.564   15.000  
 17   17  33  0.957  0.088  -0.277  0.588   22.730  
 18   18  34  0.968  0.073  -0.747  0.620   17.390  
 19   19  31  0.964  0.096  -0.023  0.606   25.000  
 20   20  34  0.952  0.112   0.621  0.663   43.480  
 21   21  33  0.952  0.096  -0.016  0.651   22.730  
 22   22  33  0.964  0.094  -0.081  0.619   18.180  
 23   23  33  0.969  0.077  -0.635  0.624   18.180  
 24   24  34  0.967  0.083  -0.396  0.621   21.740  
 25   25  31  0.962  0.089  -0.258  0.601   20.000  
 26   26  30  0.963  0.086  -0.335  0.610   20.000  
 27   27  34  0.940  0.111   0.586  0.566   21.740  
 28   28  30  0.965  0.089  -0.242  0.554   10.000  
 29   29  34  0.966  0.097   0.095  0.586   13.040  
 30   30  23  0.954  0.103   0.305  0.574   17.390  
 31   31  20  0.970  0.083  -0.460  0.514   25.000  
 32   32  20  0.954  0.113   0.503  0.527   15.000  
 33   33  22  0.959  0.092  -0.147  0.478   18.180  
 34   34  23  0.936  0.097   0.095  0.547   30.430  
 35   35  22  0.930  0.101   0.147  0.580   31.820  
 36   36  20  0.932  0.094  -0.091  0.554   25.000  
 37   37  20  0.948  0.086  -0.335  0.580   30.000  
 38   38  23  0.937  0.085  -0.326  0.614   26.090  
 39   39  20  0.938  0.091  -0.180  0.590   25.000  
 40   40  20  0.930  0.094  -0.091  0.580   20.000  
 41   41  20  0.859  0.134   1.252  0.556   15.000  
 42   42  23  0.871  0.139   1.568  0.456   21.740  
 43   43  23  0.931  0.108   0.481  0.654   34.780  
 44   44  23  0.956  0.096   0.060  0.615   17.390  
 45   45  20  0.958  0.098   0.044  0.514   15.000  
 46   46  22  0.958  0.103   0.212  0.548   27.270  
 47   47  23  0.968  0.087  -0.256  0.606   21.740  
 48   48  22  0.953  0.103   0.212  0.571   13.640  
 49   49  23  0.964  0.087  -0.256  0.591   17.390  
 50   50  20  0.968  0.084  -0.426  0.651   20.000  
 51   51  20  0.950  0.100   0.111  0.550   25.000  
 52   52  20  0.946  0.120   0.782  0.649   35.000  
 53   53  22  0.972  0.090  -0.212  0.620   18.180  
 54   54  22  0.973  0.089  -0.244  0.627   31.820  
 55   55  20  0.964  0.085  -0.393  0.665   25.000  
 56   56  22  0.962  0.088  -0.277  0.655   22.730  
 57   57  20  0.967  0.083  -0.460  0.628   40.000  
 58   58  33  0.964  0.085  -0.375  0.633   18.180  
 59   59  34  0.969  0.076  -0.642  0.654   26.090  
 60   60  31  0.965  0.086  -0.359  0.592   15.000  
 61   61  34  0.957  0.097   0.095  0.636   39.130  
 62   62  33  0.943  0.120   0.765  0.534   22.730  
 63   63  33  0.962  0.083  -0.440  0.605    9.090  
 64   64  33  0.960  0.100   0.114  0.656   22.730  
 65   65  34  0.943  0.100   0.200  0.646   17.390  
 66   66  31  0.960  0.092  -0.158  0.580   10.000  
 67   67  30  0.960  0.092  -0.149  0.636   15.000  
 68   68  23  0.962  0.091  -0.116  0.633   26.090  
 69   69  20  0.972  0.084  -0.398  0.650   35.000  
 70   70  23  0.954  0.099   0.165  0.648   39.130  
 71   71  23  0.968  0.078  -0.572  0.612   17.390  
 72   72  20  0.946  0.095  -0.057  0.586   35.000  
 73   73  20  0.948  0.090  -0.211  0.617   30.000  
 74   74  22  0.942  0.108   0.375  0.552    9.090  
 75   75  23  0.935  0.122   0.972  0.507   13.040  
 76   76  22  0.939  0.126   0.961  0.508   18.180  
 77   77  20  0.942  0.143   1.554  0.401   20.000  
 78   78  20  0.936  0.126   0.907  0.505   30.000  
 79   79  23  0.950  0.091  -0.116  0.552   26.090  
 80   80  20  0.948  0.091  -0.180  0.573   15.000  
 81   81  20  0.931  0.113   0.547  0.630   15.000  
 82   82  20  0.932  0.108   0.379  0.535   20.000  
 83   83   5  0.893  0.207       ?  0.533   20.000  
 84   84   1  0.898  0.246       ?  1.053  100.000  
 85   85   5  0.959  0.094       ?  0.637   20.000  
 86   86   5  0.810  0.167       ?  0.522   20.000  
 87   87   5  0.948  0.119       ?  0.609   20.000  
 88   88   1  0.801  0.697       ?  0.845  100.000  
 89   89   1  0.824  0.282       ?  0.010    0.000  
 90   90   1  0.719  0.365       ?  0.632    0.000  
 91   91   1  0.841  0.233       ?  0.174    0.000  
 92   92   1  0.942  0.159       ?  0.140    0.000  
 93   93   1  0.647  0.191       ?  0.000    0.000  
 94   94   1  0.684  0.216       ?  0.002    0.000  
 95   95   1  0.878  0.222       ?  0.000    0.000  
 96   96   1  0.685  0.181       ?  0.271    0.000  
 97   97   1  0.817  0.155       ?  0.160    0.000  
 98   98   1  0.920  0.122       ?  0.804  100.000  
 99   99   1  0.740  0.226       ?  0.300    0.000  
100  100   1  0.828  0.325       ?  0.006    0.000  
101  101   1  0.918  0.249       ?  0.234    0.000  
102  102   1  0.907  0.164       ?  0.286    0.000  
103  103   1  0.907  0.176       ?  0.197    0.000  
104  104   1  0.868  0.367       ?  0.000    0.000  
105  105   1  0.640  0.418       ?  0.585    0.000  
106  106   1  0.894  0.215       ?  0.002    0.000  
107  107   1  0.925  0.115       ?  0.479    0.000  
108  108   1  0.756  0.407       ?  0.862  100.000  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          3.0                                                                   Y  
4  dcc          '"2.29  (2024-07-11))"'                                               Y  
5  xtriage      1.21                                                                  Y  
6  percentiles  "20231227.v01 (using entries in the PDB archive December 27th 2023)"  Y  
##
