data_8TA9

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  8TA9
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    8TA9
_pdbx_vrpt_summary.PDB_deposition_date         2023-06-27
_pdbx_vrpt_summary.PDB_revision_number         1
_pdbx_vrpt_summary.PDB_revision_date           2023-12-20
_pdbx_vrpt_summary.report_creation_date        2023-12-11:15:26
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "DNA (5'-D(*GP*AP*GP*AP*AP*TP*TP*CP*CP*TP*GP*AP*CP*GP*GP*AP*AP*CP*TP*CP*A*(DAP))-3')"  
2  polymer      "DNA (5'-D(P*CP*CP*GP*TP*CP*A)-3')"  
3  polymer      "DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*T)-3')"  
4  polymer      "DNA (5'-D(P*GP*GP*AP*AP*TP*TP*C)-3')"  
5  non-polymer  "COBALT (II) ION"  
6  non-polymer  6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  3  
D  4  
E  5  
F  6  
G  5  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  2.8  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1   10.75  141614     ?     ?  
2  2  1   32.87    3569  2.80  2.80  
3  1  2  100.00  127900     ?     ?  
4  2  2  100.00    3078  2.80  2.80  
5  1  3   36.52  130704     ?     ?  
6  2  3   72.39    3140  2.80  2.80  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  3  2  B  1  2  B  100.00  
4  4  2  B  1  2  B  100.00  
5  3  2  C  1  3  C  100.00  
6  4  2  C  1  3  C  100.00  
7  3  2  D  1  4  D  100.00  
8  4  2  D  1  4  D  100.00  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  1.96  0.81  482  742  
2  1  2  B  B  2.12  1.04  133  202  
3  1  3  C  C  1.94  0.78  179  275  
4  1  4  D  D  1.83  0.93  162  248  
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       18.22
_pdbx_vrpt_summary_geometry.num_H_reduce     494
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   956
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.86
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1467
_pdbx_vrpt_summary_geometry.angles_RMSZ      1.96
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 122.608
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            48.913
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         92.759
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.47(2.81A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        7127
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.022
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.217
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.512
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.345
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.974
_pdbx_vrpt_summary_diffraction.twin_fraction             -h,-k,l:0.021;h,-h-k,-l:0.055;-k,-h,-l:0.045
_pdbx_vrpt_summary_diffraction.DCC_R                     0.20
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.25
_pdbx_vrpt_summary_diffraction.EDS_R                     0.20
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.80
_pdbx_vrpt_summary_diffraction.EDS_res_low               41.49
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[86.706,86.706,109.571,-0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.242
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 7.84% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         7
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         95.43
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      364
_pdbx_vrpt_summary_diffraction.percent_free_reflections  5.11
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.80
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        41.52
_pdbx_vrpt_summary_diffraction.PDB_R                     0.19
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.24
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_symm_clashes
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
 1  1  1  A   1  DG   A    1  .  ?        1     9     ?     ?     ?     ?  
 2  1  1  A   2  DA   A    2  .  ?        1     2     ?     ?     ?     ?  
 3  1  1  A   3  DG   A    3  .  ?        ?     1     ?     ?     ?     ?  
 4  1  1  A   4  DA   A    4  .  ?        ?     ?     ?     ?     ?     ?  
 5  1  1  A   5  DA   A    5  .  ?        1     3     ?     ?     ?     ?  
 6  1  1  A   6  DT   A    6  .  ?        ?     1     ?     ?     ?     ?  
 7  1  1  A   7  DT   A    7  .  ?        1     ?     ?     ?     ?     ?  
 8  1  1  A   8  DC   A    8  .  ?        1     ?     ?     ?     ?     ?  
 9  1  1  A   9  DC   A    9  .  ?        ?     ?     ?     ?     ?     ?  
10  1  1  A  10  DT   A   10  .  ?        1     ?     ?     ?     ?     ?  
11  1  1  A  11  DG   A   11  .  ?        1     ?     ?     ?     ?     ?  
12  1  1  A  12  DA   A   12  .  ?        1     ?     ?     ?     ?     ?  
13  1  1  A  13  DC   A   13  .  ?        2     ?     ?     ?     ?     ?  
14  1  1  A  14  DG   A   14  .  ?        ?     2     ?     ?     ?     ?  
15  1  1  A  15  DG   A   15  .  ?        1     ?     ?     ?     ?     ?  
16  1  1  A  16  DA   A   16  .  ?        1     ?     ?     ?     ?     ?  
17  1  1  A  17  DA   A   17  .  ?        1     2     ?     ?     ?     ?  
18  1  1  A  18  DC   A   18  .  ?        1     3     ?     ?     ?     ?  
19  1  1  A  19  DT   A   19  .  ?        2     1     ?     ?     ?     ?  
20  1  1  A  20  DC   A   20  .  ?        1     1     ?     ?     ?     ?  
21  1  1  A  21  DA   A   21  .  ?        ?     1     ?     ?     ?     ?  
22  1  2  B   1  DC   B    0  .  ?        1     ?     2     ?     ?     ?  
23  1  2  B   2  DC   B    1  .  ?        2     1     ?     ?     ?     ?  
24  1  2  B   3  DG   B    2  .  ?        1     1     ?     ?     ?     ?  
25  1  2  B   4  DT   B    3  .  ?        ?     1     ?     ?     ?     ?  
26  1  2  B   5  DC   B    4  .  ?        1     2     ?     ?     ?     ?  
27  1  2  B   6  DA   B    5  .  ?        1     1     2     ?     ?     ?  
28  1  3  C   1  DT   C    1  .  ?        ?     3     ?     ?     ?     ?  
29  1  3  C   2  DC   C    2  .  ?        1     3     ?     ?     ?     ?  
30  1  3  C   3  DT   C    3  .  ?        1     ?     ?     ?     ?     ?  
31  1  3  C   4  DG   C    4  .  ?        ?     ?     ?     ?     ?     ?  
32  1  3  C   5  DA   C    5  .  ?        1     ?     ?     ?     ?     ?  
33  1  3  C   6  DG   C    6  .  ?        1     ?     ?     ?     ?     ?  
34  1  3  C   7  DT   C    7  .  ?        3     ?     ?     ?     ?     ?  
35  1  3  C   8  DT   C    8  .  ?        ?     ?     3     ?     ?     ?  
36  1  4  D   1  DG   D   10  .  ?        ?     ?     3     ?     ?     ?  
37  1  4  D   2  DG   D   11  .  ?        1     ?     ?     ?     ?     ?  
38  1  4  D   3  DA   D   12  .  ?        2     ?     ?     ?     ?     ?  
39  1  4  D   4  DA   D   13  .  ?        1     4     ?     ?     ?     ?  
40  1  4  D   5  DT   D   14  .  ?        ?     1     ?     ?     ?     ?  
41  1  4  D   6  DT   D   15  .  ?        2     ?     ?     ?     ?     ?  
42  1  4  D   7  DC   D   16  .  ?        1     ?     ?     ?     ?     ?  
43  1  5  E   .  CO   A  101  .  ?        ?     ?     ?     ?     ?     ?  
44  1  6  F   .  DAP  D  101  .  ?        ?     7     ?     1     2     2  
45  1  5  G   .  CO   D  102  .  ?        ?     ?     ?     ?     ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1    12  107.240    22  0.85    35  1.91  molprobity  1.000  
 2   2    11  101.250    24  0.83    37  1.60  molprobity  1.000  
 3   3    11   99.820    25  0.91    39  1.08  molprobity  1.000  
 4   4    11   99.950    24  0.78    37  1.39  molprobity  1.000  
 5   5    11   96.870    24  0.66    37  2.23  molprobity  1.000  
 6   6    12   99.650    22  0.67    34  1.84  molprobity  1.000  
 7   7    12   90.480    22  0.74    34  2.28  molprobity  1.000  
 8   8    11   92.080    21  0.82    32  2.18  molprobity  1.000  
 9   9    11   90.170    21  0.78    32  1.41  molprobity  1.000  
10  10    12   91.050    22  0.62    34  1.72  molprobity  1.000  
11  11    11   76.050    25  0.85    39  2.25  molprobity  1.000  
12  12    11   73.790    24  0.69    37  1.68  molprobity  1.000  
13  13    11   71.230    21  1.06    32  2.40  molprobity  1.000  
14  14    11   79.790    25  0.89    39  1.64  molprobity  1.000  
15  15    11   79.340    25  0.84    39  2.32  molprobity  1.000  
16  16    11   75.540    24  0.74    37  2.47  molprobity  1.000  
17  17    11   77.980    24  0.75    37  1.92  molprobity  1.000  
18  18    11   76.050    21  0.74    32  2.27  molprobity  1.000  
19  19    12   74.350    22  0.97    34  2.15  molprobity  1.000  
20  20    11   89.610    21  0.78    32  2.22  molprobity  1.000  
21  21    12   98.600    23  0.84    33  1.37  molprobity  1.000  
22  22    11   53.610    21  1.40    32  2.21  molprobity  1.000  
23  23    11   60.150    21  1.03    32  2.60  molprobity  1.000  
24  24    11   66.900    25  0.76    39  1.55  molprobity  1.000  
25  25    12   71.890    22  0.85    34  1.87  molprobity  1.000  
26  26    11   60.400    21  1.21    32  2.64  molprobity  1.000  
27  27    12   58.320    23  0.92    33  1.79  molprobity  1.000  
28  28    13  108.310    19  0.66    30  1.26  molprobity  1.000  
29  29    11  110.510    21  0.65    32  2.65  molprobity  1.000  
30  30    12   99.600    22  0.85    34  1.92  molprobity  1.000  
31  31    11   93.730    25  0.75    39  1.35  molprobity  1.000  
32  32    11   90.700    24  0.66    37  2.00  molprobity  1.000  
33  33    11   66.780    25  0.88    39  1.72  molprobity  1.000  
34  34    12   58.590    22  0.93    34  2.52  molprobity  1.000  
35  35    13   55.360    21  0.79    30  1.72  molprobity  1.000  
36  36    11   58.510    25  1.27    39  1.90  molprobity  1.000  
37  37    11   71.070    25  1.05    39  1.96  molprobity  1.000  
38  38    11   88.900    24  0.69    37  1.79  molprobity  1.000  
39  39    11   94.120    24  0.65    37  1.80  molprobity  1.000  
40  40    12   96.230    22  0.84    34  1.48  molprobity  1.000  
41  41    12  110.970    22  0.91    34  1.97  molprobity  1.000  
42  42    12  114.900    20  0.87    28  1.82  molprobity  1.000  
43  43     ?  151.150     ?     ?     ?     ?  ?           1.000  
44  44    15  124.810    21  1.20    19  1.47  mogul       1.000  
45  45     ?  121.210     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   1  "H5''"   1  0.58  1.66  
 2   1  "H5''"   2  0.44  2.51  
 3   1  H8       1  0.58  1.66  
 4   1  H8       3  0.46  2.27  
 5   1  "H2'"    4  0.53  2.44  
 6   1  "C5'"    5  0.48  2.96  
 7   1  "C5'"    3  0.46  2.27  
 8   1  C8       5  0.48  2.96  
 9   1  C8       2  0.44  2.51  
10   2  "H1'"    6  0.56  1.86  
11   2  C8       4  0.53  2.44  
12   3  "H5'"    6  0.56  1.86  
13   5  H2       7  0.52  1.74  
14   5  "H2''"   8  0.52  2.10  
15   5  C2       9  0.45  2.50  
16   6  OP2      8  0.52  2.10  
17  14  "O5'"   10  0.46  2.15  
18  14  "H2'"   10  0.46  2.15  
19  17  "H2''"  11  0.56  2.05  
20  17  C4      12  0.41  3.09  
21  18  "O5'"   11  0.56  2.05  
22  18  "H2''"  13  0.51  2.11  
23  18  C6      12  0.41  3.09  
24  19  "O5'"   13  0.51  2.11  
25  20  "H2''"  14  0.59  2.36  
26  21  C8      14  0.59  2.36  
27  23  "H2'"   15  0.58  2.37  
28  24  C8      15  0.58  2.37  
29  25  "H2''"  16  0.57  1.86  
30  26  "H5'"   16  0.57  1.86  
31  26  "H2''"  17  0.46  2.15  
32  27  "O5'"   17  0.46  2.15  
33  28  "H2''"  18  0.63  1.97  
34  28  "C2'"   19  0.55  2.54  
35  28  "H2'"   20  0.43  2.53  
36  29  "O5'"   18  0.63  1.97  
37  29  "O5'"   19  0.55  2.54  
38  29  C6      20  0.43  2.53  
39  39  C2      21  0.70  2.26  
40  39  H2      22  0.51  1.75  
41  39  N3      23  0.51  2.26  
42  39  "H1'"   24  0.46  2.31  
43  40  O2      25  0.72  1.89  
44  44  "H2'"   25  0.72  1.89  
45  44  H7      21  0.70  2.26  
46  44  H7      22  0.51  1.75  
47  44  H7      23  0.51  2.26  
48  44  "H3'"    7  0.52  1.74  
49  44  "H3'"    9  0.45  2.50  
50  44  N3      24  0.46  2.31  
#
loop_
_pdbx_vrpt_instance_symm_clashes.ordinal
_pdbx_vrpt_instance_symm_clashes.instance_id
_pdbx_vrpt_instance_symm_clashes.label_atom_id
_pdbx_vrpt_instance_symm_clashes.scid
_pdbx_vrpt_instance_symm_clashes.symop
_pdbx_vrpt_instance_symm_clashes.clashmag
_pdbx_vrpt_instance_symm_clashes.dist
 1  22  P      0  1_555  0.42  1.78  
 2  22  OP1    1  1_555  0.33  1.87  
 3  27  "O3'"  0  3_655  0.42  1.78  
 4  27  "O3'"  1  3_655  0.33  1.87  
 5  35  "O3'"  2  1_555  0.32  1.88  
 6  35  "O3'"  3  1_555  0.19  2.01  
 7  35  "O3'"  4  1_555  0.15  2.05  
 8  36  OP2    2  3_655  0.32  1.88  
 9  36  OP1    3  3_655  0.19  2.01  
10  36  P      4  3_655  0.15  2.05  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
 1   1  P      "O3'"  "C3'"  112.490  119.700  1.200   -6.01  Y     
 2   2  P      "O3'"  "C3'"  112.131  119.700  1.200   -6.31  Y     
 3   5  P      "O3'"  "C3'"  107.940  119.700  1.200   -9.80  Y     
 4   7  P      "O3'"  "C3'"  112.184  119.700  1.200   -6.26  Y     
 5   8  P      "O3'"  "C3'"  110.069  119.700  1.200   -8.03  Y     
 6  10  P      "O3'"  "C3'"  110.226  119.700  1.200   -7.89  Y     
 7  11  P      "O3'"  "C3'"  105.823  119.700  1.200  -11.56  Y     
 8  12  P      "O3'"  "C3'"  112.307  119.700  1.200   -6.16  Y     
 9  13  P      "O3'"  "C3'"  110.684  119.700  1.200   -7.51  Y     
10  13  "C1'"  "O4'"  "C4'"  104.878  110.100  1.000   -5.22  ?     
11  15  P      "O3'"  "C3'"  107.045  119.700  1.200  -10.55  Y     
12  16  P      "O3'"  "C3'"  105.088  119.700  1.200  -12.18  Y     
13  17  P      "O3'"  "C3'"  110.379  119.700  1.200   -7.77  Y     
14  18  P      "O3'"  "C3'"  106.748  119.700  1.200  -10.79  Y     
15  19  "O3'"  P      "O5'"   91.364  104.000  1.900   -6.65  Y     
16  19  "O4'"  "C1'"  "C2'"  101.695  105.900  0.800   -5.26  ?     
17  20  P      "O3'"  "C3'"  107.465  119.700  1.200  -10.20  Y     
18  22  P      "O3'"  "C3'"  109.818  119.700  1.200   -8.23  Y     
19  23  P      "O3'"  "C3'"  106.911  119.700  1.200  -10.66  Y     
20  23  OP1    P      OP2    127.444  119.600  1.500    5.23  ?     
21  24  P      "O3'"  "C3'"  112.610  119.700  1.200   -5.91  Y     
22  26  "O5'"  P      OP1     96.240  105.700  0.900  -10.51  ?     
23  27  "O4'"  "C1'"  "C2'"  101.470  105.900  0.800   -5.54  ?     
24  29  P      "O3'"  "C3'"  104.057  119.700  1.200  -13.04  Y     
25  30  P      "O3'"  "C3'"  111.284  119.700  1.200   -7.01  Y     
26  32  P      "O3'"  "C3'"  109.923  119.700  1.200   -8.15  Y     
27  33  P      "O3'"  "C3'"  112.410  119.700  1.200   -6.08  Y     
28  34  P      "O3'"  "C3'"  113.515  119.700  1.200   -5.15  Y     
29  34  "C4'"  "C3'"  "C2'"   98.565  103.100  0.900   -5.04  ?     
30  34  C4     C5     C7     115.976  119.000  0.600   -5.04  ?     
31  37  P      "O3'"  "C3'"  112.570  119.700  1.200   -5.94  Y     
32  38  P      "O3'"  "C3'"  112.734  119.700  1.200   -5.80  Y     
33  38  "O5'"  P      OP2    100.258  105.700  0.900   -6.05  ?     
34  39  P      "O3'"  "C3'"  113.225  119.700  1.200   -5.40  Y     
35  41  "C1'"  "O4'"  "C4'"  103.681  110.100  1.000   -6.42  ?     
36  41  "O4'"  "C1'"  N1     111.555  108.000  0.700    5.08  ?     
37  42  "C1'"  "O4'"  "C4'"  104.574  110.100  1.000   -5.53  ?     
#
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal      1
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id  44
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1       C11
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2       N5
_pdbx_vrpt_instance_mogul_bond_outliers.obsval       1.27
_pdbx_vrpt_instance_mogul_bond_outliers.mean         1.33
_pdbx_vrpt_instance_mogul_bond_outliers.numobs       537
_pdbx_vrpt_instance_mogul_bond_outliers.stdev        0.03
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore       -2.32
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff      0.00
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  44  C6     C10  N3  121.38  118.05  169  1.51  2.21  0.03  
2  44  "C4'"  C11  N5  125.55  118.05  169  1.51  4.97  1.73  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
1  44  N3  C10  C6  C5  119.07  59.33  60  30.55  15.74  0.00  
2  44  N3  C10  C6  C7  -60.05  59.33  60  31.38  13.01  0.00  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  19  0.944  0.094  -1.301  
 2   2  21  0.943  0.089  -1.340  
 3   3  22  0.936  0.082  -1.479  
 4   4  21  0.939  0.077  -1.511  
 5   5  21  0.909  0.098  -1.211  
 6   6  20  0.949  0.107  -1.069  
 7   7  20  0.965  0.083  -1.371  
 8   8  19  0.978  0.086  -1.352  
 9   9  19  0.963  0.099  -1.180  
10  10  20  0.969  0.119  -0.918  
11  11  22  0.967  0.112  -1.034  
12  12  21  0.976  0.119  -0.910  
13  13  19  0.970  0.120  -0.902  
14  14  22  0.969  0.108  -1.093  
15  15  22  0.967  0.099  -1.227  
16  16  21  0.974  0.093  -1.282  
17  17  21  0.960  0.107  -1.082  
18  18  19  0.975  0.096  -1.220  
19  19  20  0.962  0.109  -1.044  
20  20  19  0.963  0.086  -1.352  
21  21  21  0.943  0.085  -1.397  
22  22  19  0.984  0.118  -0.928  
23  23  19  0.984  0.106  -1.087  
24  24  22  0.973  0.112  -1.034  
25  25  20  0.980  0.117  -0.943  
26  26  19  0.982  0.133  -0.730  
27  27  21  0.982  0.126  -0.809  
28  28  17  0.955  0.116  -0.956  
29  29  19  0.937  0.103  -1.127  
30  30  20  0.939  0.095  -1.220  
31  31  22  0.963  0.085  -1.434  
32  32  21  0.969  0.085  -1.397  
33  33  22  0.971  0.092  -1.330  
34  34  20  0.967  0.129  -0.793  
35  35  20  0.980  0.135  -0.717  
36  36  22  0.981  0.120  -0.916  
37  37  22  0.978  0.098  -1.241  
38  38  21  0.955  0.100  -1.182  
39  39  21  0.941  0.091  -1.311  
40  40  20  0.955  0.092  -1.258  
41  41  20  0.938  0.114  -0.981  
42  42  19  0.898  0.117  -0.942  
43  43   1  0.670  0.169       ?  
44  44  21  0.920  0.230       ?  
45  45   1  0.947  0.083       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          2.36                                                                  Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
