data_8T80

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  8T80
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    8T80
_pdbx_vrpt_summary.PDB_deposition_date         2023-06-21
_pdbx_vrpt_summary.PDB_revision_number         1
_pdbx_vrpt_summary.PDB_revision_date           2023-12-20
_pdbx_vrpt_summary.report_creation_date        2023-12-11:15:22
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "DNA (5'-D(*GP*AP*GP*AP*AP*TP*TP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*AP*TP*TP*A)-3')"  
2  polymer      "DNA (5'-D(P*CP*GP*TP*CP*G)-3')"  
3  polymer      "DNA (5'-D(*TP*CP*TP*AP*AP*TP*TP*GP*T)-3')"  
4  polymer      "DNA (5'-D(P*GP*GP*AP*AP*TP*TP*C)-3')"  
5  non-polymer  "MAGNESIUM ION"  
6  non-polymer  "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE"  
7  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  3  
D  4  
E  5  
F  6  
G  6  
H  7  
I  7  
J  7  
K  7  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  2.91  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1    8.04  141614     ?     ?  
2  2  1   27.54    2531  2.90  2.94  
3  1  2  100.00  127900     ?     ?  
4  2  2  100.00    2248  2.90  2.94  
5  1  3   57.97  130704     ?     ?  
6  2  3   90.57    2307  2.90  2.94  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  3  2  B  1  2  B  100.00  
4  4  2  B  1  2  B  100.00  
5  3  2  C  1  3  C  100.00  
6  4  2  C  1  3  C  100.00  
7  3  2  D  1  4  D  100.00  
8  4  2  D  1  4  D  100.00  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  1.59  0.79  482  742  
2  1  2  B  B  1.88  0.95  113  172  
3  1  3  C  C  1.67  0.83  200  307  
4  1  4  D  D  1.62  0.98  162  248  
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       21.20
_pdbx_vrpt_summary_geometry.num_H_reduce     537
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   957
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.85
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1469
_pdbx_vrpt_summary_geometry.angles_RMSZ      1.65
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 400.000
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            82.997
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         99.736
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.35(2.90A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        6237
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.242
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.214
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.495
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.328
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.964
_pdbx_vrpt_summary_diffraction.twin_fraction             -h,-k,l:0.046;h,-h-k,-l:0.089;-k,-h,-l:0.055
_pdbx_vrpt_summary_diffraction.DCC_R                     0.22
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.23
_pdbx_vrpt_summary_diffraction.EDS_R                     0.23
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.91
_pdbx_vrpt_summary_diffraction.EDS_res_low               41.88
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[95.048,95.048,120.200,-0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.243
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 9.32% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         6
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         91.94
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      305
_pdbx_vrpt_summary_diffraction.percent_free_reflections  4.89
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.91
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        41.88
_pdbx_vrpt_summary_diffraction.PDB_R                     0.22
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.24
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_symm_clashes
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
 1  1  1  A   1  DG   A    1  .  ?        ?     ?     ?     ?     ?  
 2  1  1  A   2  DA   A    2  .  ?        ?     ?     ?     ?     ?  
 3  1  1  A   3  DG   A    3  .  ?        1     1     ?     ?     ?  
 4  1  1  A   4  DA   A    4  .  ?        ?     ?     ?     ?     ?  
 5  1  1  A   5  DA   A    5  .  ?        ?     4     ?     ?     ?  
 6  1  1  A   6  DT   A    6  .  ?        ?     2     ?     ?     ?  
 7  1  1  A   7  DT   A    7  .  ?        ?     ?     ?     ?     ?  
 8  1  1  A   8  DC   A    8  .  ?        ?     ?     ?     ?     ?  
 9  1  1  A   9  DC   A    9  .  ?        ?     1     ?     ?     ?  
10  1  1  A  10  DT   A   10  .  ?        ?     1     ?     ?     ?  
11  1  1  A  11  DG   A   11  .  ?        1     ?     ?     ?     ?  
12  1  1  A  12  DA   A   12  .  ?        1     1     ?     ?     ?  
13  1  1  A  13  DC   A   13  .  ?        ?     1     ?     ?     ?  
14  1  1  A  14  DG   A   14  .  ?        ?     3     ?     ?     ?  
15  1  1  A  15  DA   A   15  .  ?        1     3     ?     ?     ?  
16  1  1  A  16  DC   A   16  .  ?        1     ?     ?     ?     ?  
17  1  1  A  17  DA   A   17  .  ?        1     ?     ?     ?     ?  
18  1  1  A  18  DA   A   18  .  ?        1     1     ?     ?     ?  
19  1  1  A  19  DT   A   19  .  ?        1     2     ?     ?     ?  
20  1  1  A  20  DT   A   20  .  ?        ?     1     ?     ?     ?  
21  1  1  A  21  DA   A   21  .  ?        ?     ?     ?     ?     ?  
22  1  2  B   1  DC   B    1  .  ?        1     ?     3     ?     ?  
23  1  2  B   2  DG   B    2  .  ?        1     ?     ?     ?     ?  
24  1  2  B   3  DT   B    3  .  ?        ?     1     ?     ?     ?  
25  1  2  B   4  DC   B    4  .  ?        1     2     ?     ?     ?  
26  1  2  B   5  DG   B    5  .  ?        1     2     3     ?     ?  
27  1  3  C   1  DT   C    1  .  ?        ?     1     ?     ?     ?  
28  1  3  C   2  DC   C    2  .  ?        ?     2     ?     ?     ?  
29  1  3  C   3  DT   C    3  .  ?        1     1     ?     ?     ?  
30  1  3  C   4  DA   C    4  .  ?        ?     1     ?     ?     ?  
31  1  3  C   5  DA   C    5  .  ?        ?     2     ?     ?     ?  
32  1  3  C   6  DT   C    6  .  ?        ?     1     ?     ?     ?  
33  1  3  C   7  DT   C    7  .  ?        2     1     ?     ?     ?  
34  1  3  C   8  DG   C    8  .  ?        1     4     ?     ?     ?  
35  1  3  C   9  DT   C    9  .  ?        1     4     2     ?     ?  
36  1  4  D   1  DG   D   10  .  ?        1     1     2     ?     ?  
37  1  4  D   2  DG   D   11  .  ?        ?     ?     ?     ?     ?  
38  1  4  D   3  DA   D   12  .  ?        1     2     ?     ?     ?  
39  1  4  D   4  DA   D   13  .  ?        2     4     ?     ?     ?  
40  1  4  D   5  DT   D   14  .  ?        ?     1     ?     ?     ?  
41  1  4  D   6  DT   D   15  .  ?        ?     ?     ?     ?     ?  
42  1  4  D   7  DC   D   16  .  ?        ?     1     ?     ?     ?  
43  1  5  E   .  MG   A  101  .  ?        ?     ?     ?     ?     ?  
44  1  6  F   .  HT1  A  102  .  ?        ?     3     ?     6     2  
45  1  6  G   .  HT1  D  101  .  ?        ?     5     ?     3     2  
46  1  7  H   .  HOH  A  201  .  ?        ?     ?     ?     ?     ?  
47  1  7  I   .  HOH  B  101  .  ?        ?     ?     ?     ?     ?  
48  1  7  I   .  HOH  B  102  .  ?        ?     ?     ?     ?     ?  
49  1  7  J   .  HOH  C  101  .  ?        ?     ?     ?     ?     ?  
50  1  7  K   .  HOH  D  201  .  ?        ?     ?     ?     ?     ?  
51  1  7  K   .  HOH  D  202  .  ?        ?     ?     ?     ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1    12  158.810    22  0.74    35  1.24  molprobity  1.000  
 2   2    11  156.180    24  0.81    37  1.61  molprobity  1.000  
 3   3    11  142.300    25  0.81    39  1.81  molprobity  1.000  
 4   4    11  133.670    24  0.68    37  1.14  molprobity  1.000  
 5   5    11  126.970    24  0.74    37  1.48  molprobity  1.000  
 6   6    12  132.610    22  0.82    34  1.23  molprobity  1.000  
 7   7    12  127.660    22  0.82    34  1.46  molprobity  1.000  
 8   8    11  124.900    21  0.67    32  1.24  molprobity  1.000  
 9   9    11  116.680    21  0.76    32  1.25  molprobity  1.000  
10  10    12  116.600    22  0.67    34  0.96  molprobity  1.000  
11  11    11  105.920    25  0.76    39  1.91  molprobity  1.000  
12  12    11   92.470    24  0.67    37  1.59  molprobity  1.000  
13  13    11   83.480    21  1.01    32  1.57  molprobity  1.000  
14  14    11   92.970    25  0.81    39  1.44  molprobity  1.000  
15  15    11   99.230    24  0.75    37  1.85  molprobity  1.000  
16  16    11   99.320    21  0.94    32  1.89  molprobity  1.000  
17  17    11  109.890    24  0.79    37  1.78  molprobity  1.000  
18  18    11   96.890    24  0.82    37  2.37  molprobity  1.000  
19  19    12   99.110    22  0.83    34  1.82  molprobity  1.000  
20  20    12  111.540    22  0.85    34  1.81  molprobity  1.000  
21  21    12  136.490    23  0.77    33  1.06  molprobity  1.000  
22  22    11   74.690    21  1.35    32  2.36  molprobity  1.000  
23  23    11   88.900    25  0.83    39  1.73  molprobity  1.000  
24  24    12  102.360    22  0.74    34  1.10  molprobity  1.000  
25  25    11   85.570    21  0.80    32  2.12  molprobity  1.000  
26  26    12   77.990    24  0.92    35  1.92  molprobity  1.000  
27  27    13  156.340    19  0.68    30  1.14  molprobity  1.000  
28  28    11  168.070    21  0.70    32  1.52  molprobity  1.000  
29  29    12  158.580    22  0.86    34  1.30  molprobity  1.000  
30  30    11  126.640    24  0.64    37  1.33  molprobity  1.000  
31  31    11  112.730    24  0.70    37  1.17  molprobity  1.000  
32  32    12   95.840    22  1.04    34  1.57  molprobity  1.000  
33  33    12   87.070    22  0.71    34  2.18  molprobity  1.000  
34  34    11   74.700    25  0.97    39  2.33  molprobity  1.000  
35  35    13   64.730    21  1.05    30  1.99  molprobity  1.000  
36  36    11   82.330    25  1.45    39  1.90  molprobity  1.000  
37  37    11  101.380    25  0.94    39  1.46  molprobity  1.000  
38  38    11  108.450    24  0.78    37  1.77  molprobity  1.000  
39  39    11  108.630    24  0.73    37  2.32  molprobity  1.000  
40  40    12  122.900    22  1.08    34  1.17  molprobity  1.000  
41  41    12  166.030    22  0.85    34  1.06  molprobity  1.000  
42  42    12  158.900    20  0.74    28  0.90  molprobity  1.000  
43  43     ?  104.690     ?     ?     ?     ?  ?           1.000  
44  44    28  125.180    37  0.76    34  1.34  mogul       1.000  
45  45    28  152.170    37  0.70    34  1.02  mogul       1.000  
46  46     ?   76.100     ?     ?     ?     ?  ?           1.000  
47  47     ?   61.810     ?     ?     ?     ?  ?           1.000  
48  48     ?   58.540     ?     ?     ?     ?  ?           1.000  
49  49     ?  100.900     ?     ?     ?     ?  ?           1.000  
50  50     ?   65.050     ?     ?     ?     ?  ?           1.000  
51  51     ?   83.310     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   3  H1       1  0.44  1.66  
 2   5  N6       2  0.50  2.58  
 3   5  N6       3  0.47  2.12  
 4   5  C2       4  0.48  3.01  
 5   5  "H1'"    5  0.44  1.99  
 6   6  C2       4  0.48  3.01  
 7   6  "H5'"    5  0.44  1.99  
 8   9  "H2''"   6  0.47  1.96  
 9  10  "H5'"    6  0.47  1.96  
10  12  "H2''"   7  0.54  2.06  
11  13  "O5'"    7  0.54  2.06  
12  14  "H1'"    8  0.50  1.93  
13  14  "O5'"    9  0.42  2.20  
14  14  "H2'"    9  0.42  2.20  
15  15  "H5'"    8  0.50  1.93  
16  15  "O5'"   10  0.49  2.13  
17  15  "H2'"   10  0.49  2.13  
18  18  "H4'"   11  0.52  1.91  
19  19  "H2'"   12  0.58  2.38  
20  19  O2      13  0.40  2.21  
21  20  C6      12  0.58  2.38  
22  24  "H2''"  14  0.42  2.19  
23  25  "H2''"  15  0.43  1.99  
24  25  OP2     14  0.42  2.19  
25  26  "H1'"   16  0.46  2.16  
26  26  "H5'"   15  0.43  1.99  
27  27  "H2''"  17  0.48  2.14  
28  28  OP2     17  0.48  2.14  
29  28  "H2''"  18  0.45  2.17  
30  29  OP2     18  0.45  2.17  
31  30  "H1'"   19  0.71  1.71  
32  31  "H5'"   19  0.71  1.71  
33  31  "H4'"   20  0.47  1.96  
34  32  "H2''"  21  0.49  2.13  
35  33  "O5'"   21  0.49  2.13  
36  34  "H2''"  22  0.73  1.71  
37  34  "H2''"  23  0.73  2.18  
38  34  "H2''"  24  0.49  1.93  
39  34  "C2'"   25  0.41  2.51  
40  35  "H5'"   22  0.73  1.71  
41  35  "C5'"   23  0.73  2.18  
42  35  "H5''"  24  0.49  1.93  
43  35  "H5''"  25  0.41  2.51  
44  36  "O4'"   16  0.46  2.16  
45  38  "H2''"  26  0.59  2.38  
46  38  "H2''"  27  0.53  1.73  
47  39  C8      26  0.59  2.38  
48  39  H8      27  0.53  1.73  
49  39  N6       2  0.50  2.58  
50  39  H61      3  0.47  2.12  
51  40  O2      28  0.42  2.19  
52  42  H42      1  0.44  1.66  
53  44  H232    11  0.52  1.91  
54  44  H273    20  0.47  1.96  
55  44  H13     13  0.40  2.21  
56  45  H273    29  0.56  1.85  
57  45  H273    30  0.45  2.45  
58  45  H6      29  0.56  1.85  
59  45  C6      30  0.45  2.45  
60  45  H13     28  0.42  2.19  
#
loop_
_pdbx_vrpt_instance_symm_clashes.ordinal
_pdbx_vrpt_instance_symm_clashes.instance_id
_pdbx_vrpt_instance_symm_clashes.label_atom_id
_pdbx_vrpt_instance_symm_clashes.scid
_pdbx_vrpt_instance_symm_clashes.symop
_pdbx_vrpt_instance_symm_clashes.clashmag
_pdbx_vrpt_instance_symm_clashes.dist
 1  22  OP1    0  1_555  0.30  1.90  
 2  22  P      1  1_555  0.12  2.08  
 3  22  OP2    2  1_555  0.03  2.17  
 4  26  "O3'"  0  3_655  0.30  1.90  
 5  26  "O3'"  1  3_655  0.12  2.08  
 6  26  "O3'"  2  3_655  0.03  2.17  
 7  35  "O3'"  3  1_555  0.16  2.04  
 8  35  "O3'"  4  1_555  0.01  2.19  
 9  36  OP1    3  3_655  0.16  2.04  
10  36  OP2    4  3_655  0.01  2.19  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
 1   3  P      "O3'"  "C3'"  108.644  119.700  1.200   -9.21  Y     
 2  11  P      "O3'"  "C3'"  109.344  119.700  1.200   -8.63  Y     
 3  12  P      "O3'"  "C3'"  110.684  119.700  1.200   -7.51  Y     
 4  15  "O5'"  P      OP1    100.898  105.700  0.900   -5.33  ?     
 5  16  P      "O3'"  "C3'"  113.245  119.700  1.200   -5.38  Y     
 6  17  P      "O3'"  "C3'"  109.756  119.700  1.200   -8.29  Y     
 7  18  P      "O3'"  "C3'"  107.594  119.700  1.200  -10.09  Y     
 8  19  "C1'"  "O4'"  "C4'"  103.713  110.100  1.000   -6.39  ?     
 9  22  P      "O3'"  "C3'"  109.434  119.700  1.200   -8.55  Y     
10  23  P      "O3'"  "C3'"  111.230  119.700  1.200   -7.06  Y     
11  25  "O4'"  "C1'"  N1     101.443  108.000  0.700   -9.37  ?     
12  26  "C4'"  "C3'"  "C2'"   98.239  103.100  0.900   -5.40  ?     
13  29  P      "O3'"  "C3'"  112.400  119.700  1.200   -6.08  Y     
14  33  P      "O3'"  "C3'"  110.537  119.700  1.200   -7.64  Y     
15  33  "C1'"  "O4'"  "C4'"  104.731  110.100  1.000   -5.37  ?     
16  34  P      "O3'"  "C3'"  109.073  119.700  1.200   -8.86  Y     
17  35  "O4'"  "C1'"  N1     103.170  108.000  0.700   -6.90  ?     
18  36  "O5'"  P      OP1     99.786  105.700  0.900   -6.57  ?     
19  38  P      "O3'"  "C3'"  109.024  119.700  1.200   -8.90  Y     
20  39  P      "O3'"  "C3'"  111.992  119.700  1.200   -6.42  Y     
21  39  "C1'"  "O4'"  "C4'"  101.586  110.100  1.000   -8.51  ?     
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  44  C18  C19  N5   117.80  121.38  7895  1.38  -2.60  0.00  
2  44  C19  C20  C15  118.31  121.02    34  0.70  -3.86  0.90  
3  44  C24  N5   C21  118.30  111.52  3146  2.21   3.07  0.00  
4  44  C22  C21  N5   115.00  110.70  2237  1.94   2.22  0.03  
5  44  C21  C22  N6   113.31  110.80  1006  1.13   2.22  0.01  
6  44  C23  C24  N5   115.26  110.70  2237  1.94   2.35  0.01  
7  45  C20  C19  N5   118.62  121.99    55  1.21  -2.78  0.29  
8  45  C19  C20  C15  119.15  121.02    34  0.70  -2.66  0.06  
9  45  C24  N5   C19  125.16  118.09  1696  2.70   2.61  0.01  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
1  44  C2  C1  O1  C26    63.44  80.30  10000  28.43  0.51  0.53  
2  44  C6  C1  O1  C26  -115.08  80.28  10000  26.78  0.14  0.43  
3  45  C2  C1  O1  C26   111.82  80.26  10000  23.85  0.25  0.44  
4  45  C6  C1  O1  C26   -69.94  80.24  10000  22.62  0.28  0.43  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  19  0.888  0.140  -0.619  
 2   2  21  0.929  0.102  -1.153  
 3   3  22  0.925  0.090  -1.360  
 4   4  21  0.911  0.093  -1.282  
 5   5  21  0.814  0.130  -0.752  
 6   6  20  0.872  0.141  -0.642  
 7   7  20  0.909  0.137  -0.692  
 8   8  19  0.933  0.142  -0.611  
 9   9  19  0.913  0.178  -0.134  
10  10  20  0.937  0.159  -0.416  
11  11  22  0.966  0.133  -0.723  
12  12  21  0.957  0.133  -0.709  
13  13  19  0.944  0.163  -0.332  
14  14  22  0.948  0.157  -0.367  
15  15  21  0.963  0.159  -0.337  
16  16  19  0.940  0.143  -0.597  
17  17  21  0.941  0.152  -0.437  
18  18  21  0.941  0.118  -0.924  
19  19  20  0.932  0.129  -0.793  
20  20  20  0.900  0.125  -0.843  
21  21  21  0.889  0.135  -0.681  
22  22  19  0.965  0.154  -0.452  
23  23  22  0.964  0.146  -0.530  
24  24  20  0.970  0.153  -0.491  
25  25  19  0.969  0.192   0.052  
26  26  22  0.949  0.202   0.299  
27  27  17  0.938  0.172  -0.253  
28  28  19  0.902  0.111  -1.021  
29  29  20  0.854  0.109  -1.044  
30  30  21  0.926  0.090  -1.325  
31  31  21  0.912  0.116  -0.953  
32  32  20  0.947  0.129  -0.793  
33  33  20  0.957  0.145  -0.592  
34  34  22  0.973  0.154  -0.412  
35  35  20  0.971  0.176  -0.202  
36  36  22  0.947  0.154  -0.412  
37  37  22  0.948  0.148  -0.501  
38  38  21  0.914  0.129  -0.766  
39  39  21  0.912  0.116  -0.953  
40  40  20  0.917  0.116  -0.956  
41  41  20  0.821  0.149  -0.541  
42  42  19  0.849  0.220   0.423  
43  43   1  0.702  0.239       ?  
44  44  34  0.948  0.252       ?  
45  45  34  0.938  0.286       ?  
46  46   1  0.598  0.458       ?  
47  47   1  0.751  0.375       ?  
48  48   1  0.822  0.238       ?  
49  49   1  0.551  0.561       ?  
50  50   1  0.747  0.171       ?  
51  51   1  0.499  0.345       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          2.36                                                                  Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
