data_8FHV

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  8FHV
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    8FHV
_pdbx_vrpt_summary.PDB_deposition_date         2022-12-15
_pdbx_vrpt_summary.PDB_revision_number         1
_pdbx_vrpt_summary.PDB_revision_date           2023-05-10
_pdbx_vrpt_summary.report_creation_date        2023-05-02:14:37
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "Lettuce DNA aptamer"  
2  non-polymer  "THALLIUM (I) ION"  
3  non-polymer  "MAGNESIUM ION"  
4  non-polymer  (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one  
5  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  2  
D  3  
E  3  
F  3  
G  3  
H  4  
I  5  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  2.5  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1  26.40  141614     ?     ?  
2  2  1  45.06    5346  2.50  2.50  
3  1  2  40.11  127900     ?     ?  
4  2  2  43.28    4559  2.50  2.50  
5  1  3  36.52  130704     ?     ?  
6  2  3  61.52    4661  2.50  2.50  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  40.11  
2  4  2  A  1  1  A  43.28  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      0.94
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.59
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   1247
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  1928
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       10.31
_pdbx_vrpt_summary_geometry.num_H_reduce     608
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   1247
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.59
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1928
_pdbx_vrpt_summary_geometry.angles_RMSZ      0.94
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 103.907
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            36.865
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         58.904
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.08(2.27A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        6303
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.289
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.276
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.492
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.329
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.952
_pdbx_vrpt_summary_diffraction.DCC_R                     0.21
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.25
_pdbx_vrpt_summary_diffraction.EDS_R                     0.23
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.27
_pdbx_vrpt_summary_diffraction.EDS_res_low               59.77
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[59.482,64.298,43.499,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.373
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 11.22% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         8
_pdbx_vrpt_summary_diffraction.centric_outliers          7
_pdbx_vrpt_summary_diffraction.data_completeness         96.87
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      599
_pdbx_vrpt_summary_diffraction.percent_free_reflections  9.50
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     3.77
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.50
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        59.77
_pdbx_vrpt_summary_diffraction.PDB_R                     0.22
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.25
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
_pdbx_vrpt_model_instance.ligand_of_interest
 1  1  1  A   1  DC   A    1  .  ?        ?     1     ?     ?     ?  ?     
 2  1  1  A   2  DT   A    2  .  ?        ?     1     ?     ?     ?  ?     
 3  1  1  A   3  DT   A    3  .  ?        ?     1     ?     ?     ?  ?     
 4  1  1  A   4  DA   A    4  .  ?        ?     1     ?     ?     ?  ?     
 5  1  1  A   5  DG   A    5  .  ?        ?     ?     ?     ?     ?  ?     
 6  1  1  A   6  DT   A    6  .  ?        ?     ?     ?     ?     ?  ?     
 7  1  1  A   7  DA   A    7  A  ?        ?     ?     ?     ?     ?  ?     
 8  1  1  A   7  DA   A    7  B  ?        ?     ?     ?     ?     ?  ?     
 9  1  1  A   8  DG   A    8  .  ?        ?     ?     ?     ?     ?  ?     
10  1  1  A   9  DG   A    9  .  ?        ?     ?     ?     ?     ?  ?     
11  1  1  A  10  DG   A   10  .  ?        ?     ?     ?     ?     ?  ?     
12  1  1  A  11  DA   A   11  .  ?        ?     ?     ?     ?     ?  ?     
13  1  1  A  12  DT   A   12  .  ?        ?     ?     ?     ?     ?  ?     
14  1  1  A  13  DG   A   13  .  ?        ?     ?     ?     ?     ?  ?     
15  1  1  A  14  DA   A   14  .  ?        ?     1     ?     ?     ?  ?     
16  1  1  A  15  DT   A   15  .  ?        ?     2     ?     ?     ?  ?     
17  1  1  A  16  DG   A   16  .  ?        ?     1     ?     ?     ?  ?     
18  1  1  A  17  DC   A   17  .  ?        1     ?     ?     ?     ?  ?     
19  1  1  A  18  DG   A   18  .  ?        ?     3     ?     ?     ?  ?     
20  1  1  A  19  DG   A   19  .  ?        1     1     ?     ?     ?  ?     
21  1  1  A  20  DC   A   20  .  ?        ?     ?     ?     ?     ?  ?     
22  1  1  A  21  DA   A   21  .  ?        ?     ?     ?     ?     ?  ?     
23  1  1  A  22  DG   A   22  .  ?        ?     ?     ?     ?     ?  ?     
24  1  1  A  23  DT   A   23  .  ?        ?     1     ?     ?     ?  ?     
25  1  1  A  24  DG   A   24  .  ?        ?     2     ?     ?     ?  ?     
26  1  1  A  25  DG   A   25  .  ?        ?     1     ?     ?     ?  ?     
27  1  1  A  26  DG   A   26  .  ?        ?     2     ?     ?     ?  ?     
28  1  1  A  27  DC   A   27  .  ?        ?     2     ?     ?     ?  ?     
29  1  1  A  28  DT   A   28  .  ?        ?     ?     ?     ?     ?  ?     
30  1  1  A  29  DT   A   29  .  ?        1     ?     ?     ?     ?  ?     
31  1  1  A  30  DC   A   30  .  ?        ?     ?     ?     ?     ?  ?     
32  1  1  A  31  DG   A   31  .  ?        ?     ?     ?     ?     ?  ?     
33  1  1  A  32  DC   A   32  .  ?        ?     ?     ?     ?     ?  ?     
34  1  1  A  33  DA   A   33  .  ?        ?     1     ?     ?     ?  ?     
35  1  1  A  34  DG   A   34  .  ?        ?     1     ?     ?     ?  ?     
36  1  1  A  35  DT   A   35  .  ?        ?     ?     ?     ?     ?  ?     
37  1  1  A  36  DT   A   36  .  ?        ?     ?     ?     ?     ?  ?     
38  1  1  A  37  DC   A   37  .  ?        ?     ?     ?     ?     ?  ?     
39  1  1  A  38  DC   A   38  .  ?        ?     2     ?     ?     ?  ?     
40  1  1  A  39  DT   A   39  .  ?        ?     3     ?     ?     ?  ?     
41  1  1  A  40  DG   A   40  .  ?        ?     1     ?     ?     ?  ?     
42  1  1  A  41  DC   A   41  .  ?        ?     5     ?     ?     ?  ?     
43  1  1  A  42  DG   A   42  .  ?        ?     1     ?     ?     ?  ?     
44  1  1  A  43  DA   A   43  .  ?        ?     ?     ?     ?     ?  ?     
45  1  1  A  44  DG   A   44  .  ?        ?     ?     ?     ?     ?  ?     
46  1  1  A  45  DG   A   45  .  ?        ?     ?     ?     ?     ?  ?     
47  1  1  A  46  DG   A   46  .  ?        ?     ?     ?     ?     ?  ?     
48  1  1  A  47  DG   A   47  .  ?        ?     ?     ?     ?     ?  ?     
49  1  1  A  48  DA   A   48  .  ?        ?     ?     ?     ?     ?  ?     
50  1  1  A  49  DC   A   49  .  ?        ?     ?     ?     ?     ?  ?     
51  1  1  A  50  DT   A   50  .  ?        ?     ?     ?     ?     ?  ?     
52  1  1  A  51  DA   A   51  .  ?        ?     ?     ?     ?     ?  ?     
53  1  1  A  52  DA   A   52  .  ?        ?     ?     ?     ?     ?  ?     
54  1  1  A  53  DG   A   53  .  ?        ?     ?     ?     ?     ?  ?     
55  1  2  B   .  TL   A  101  .  ?        ?     ?     ?     ?     ?  ?     
56  1  2  C   .  TL   A  102  .  ?        ?     ?     ?     ?     ?  ?     
57  1  3  D   .  MG   A  103  .  ?        ?     ?     ?     ?     ?  ?     
58  1  3  E   .  MG   A  104  .  ?        ?     ?     ?     ?     ?  ?     
59  1  3  F   .  MG   A  105  .  ?        ?     ?     ?     ?     ?  ?     
60  1  3  G   .  MG   A  106  .  ?        ?     ?     ?     ?     ?  ?     
61  1  4  H   .  2ZY  A  107  .  ?        ?     2     8    12     3  Y     
62  1  5  I   .  HOH  A  201  .  ?        ?     ?     ?     ?     ?  ?     
63  1  5  I   .  HOH  A  202  .  ?        ?     ?     ?     ?     ?  ?     
64  1  5  I   .  HOH  A  203  .  ?        ?     ?     ?     ?     ?  ?     
65  1  5  I   .  HOH  A  204  .  ?        ?     ?     ?     ?     ?  ?     
66  1  5  I   .  HOH  A  205  .  ?        ?     ?     ?     ?     ?  ?     
67  1  5  I   .  HOH  A  206  .  ?        ?     ?     ?     ?     ?  ?     
68  1  5  I   .  HOH  A  207  .  ?        ?     ?     ?     ?     ?  ?     
69  1  5  I   .  HOH  A  208  .  ?        ?     ?     ?     ?     ?  ?     
70  1  5  I   .  HOH  A  209  .  ?        ?     ?     ?     ?     ?  ?     
71  1  5  I   .  HOH  A  210  .  ?        ?     ?     ?     ?     ?  ?     
72  1  5  I   .  HOH  A  211  .  ?        ?     ?     ?     ?     ?  ?     
73  1  5  I   .  HOH  A  212  .  ?        ?     ?     ?     ?     ?  ?     
74  1  5  I   .  HOH  A  213  .  ?        ?     ?     ?     ?     ?  ?     
75  1  5  I   .  HOH  A  214  .  ?        ?     ?     ?     ?     ?  ?     
76  1  5  I   .  HOH  A  215  .  ?        ?     ?     ?     ?     ?  ?     
77  1  5  I   .  HOH  A  216  .  ?        ?     ?     ?     ?     ?  ?     
78  1  5  I   .  HOH  A  217  .  ?        ?     ?     ?     ?     ?  ?     
79  1  5  I   .  HOH  A  218  .  ?        ?     ?     ?     ?     ?  ?     
80  1  5  I   .  HOH  A  219  .  ?        ?     ?     ?     ?     ?  ?     
81  1  5  I   .  HOH  A  220  .  ?        ?     ?     ?     ?     ?  ?     
82  1  5  I   .  HOH  A  221  .  ?        ?     ?     ?     ?     ?  ?     
83  1  5  I   .  HOH  A  222  .  ?        ?     ?     ?     ?     ?  ?     
84  1  5  I   .  HOH  A  223  .  ?        ?     ?     ?     ?     ?  ?     
85  1  5  I   .  HOH  A  224  .  ?        ?     ?     ?     ?     ?  ?     
86  1  5  I   .  HOH  A  225  .  ?        ?     ?     ?     ?     ?  ?     
87  1  5  I   .  HOH  A  226  .  ?        ?     ?     ?     ?     ?  ?     
88  1  5  I   .  HOH  A  227  .  ?        ?     ?     ?     ?     ?  ?     
89  1  5  I   .  HOH  A  228  .  ?        ?     ?     ?     ?     ?  ?     
90  1  5  I   .  HOH  A  229  .  ?        ?     ?     ?     ?     ?  ?     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1    12   86.870    18  0.45    28  0.55  molprobity  1.000  
 2   2    12   75.890    22  0.52    34  1.23  molprobity  1.000  
 3   3    12   66.710    22  0.64    34  1.25  molprobity  1.000  
 4   4    11   61.800    24  0.50    37  0.61  molprobity  1.000  
 5   5    11   50.820    25  0.55    39  0.68  molprobity  1.000  
 6   6    12   45.790    22  0.57    34  1.31  molprobity  1.000  
 7   7    11   43.780    24  0.62    37  0.71  molprobity  1.000  
 8   8    11   43.780    24  0.62    37  0.71  molprobity  1.000  
 9   9    11   42.610    25  0.61    39  0.62  molprobity  1.000  
10  10    11   46.860    25  0.77    39  1.02  molprobity  1.000  
11  11    11   50.040    25  0.64    39  0.99  molprobity  1.000  
12  12    11   50.010    24  0.74    37  0.85  molprobity  1.000  
13  13    12   48.670    22  0.65    34  1.23  molprobity  1.000  
14  14    11   46.880    25  0.42    39  0.90  molprobity  1.000  
15  15    11   50.480    24  0.37    37  0.79  molprobity  1.000  
16  16    12   52.350    22  0.31    34  1.27  molprobity  1.000  
17  17    11   54.980    25  0.52    39  0.62  molprobity  1.000  
18  18    11   55.760    21  0.76    32  1.57  molprobity  1.000  
19  19    11   46.890    25  0.55    39  1.05  molprobity  1.000  
20  20    11   46.690    25  0.76    39  1.33  molprobity  1.000  
21  21    11   59.080    21  0.42    32  0.67  molprobity  1.000  
22  22    11   60.080    24  0.62    37  0.66  molprobity  1.000  
23  23    11   56.800    25  0.37    39  0.68  molprobity  1.000  
24  24    12   54.580    22  0.52    34  1.35  molprobity  1.000  
25  25    11   41.270    25  0.64    39  0.76  molprobity  1.000  
26  26    11   42.810    25  0.73    39  1.05  molprobity  1.000  
27  27    11   50.490    25  0.53    39  0.74  molprobity  1.000  
28  28    11   60.710    21  0.72    32  0.73  molprobity  1.000  
29  29    12   63.370    22  0.57    34  1.34  molprobity  1.000  
30  30    12   67.720    22  0.46    34  1.42  molprobity  1.000  
31  31    11   74.440    21  0.47    32  0.79  molprobity  1.000  
32  32    11   71.820    25  0.53    39  0.66  molprobity  1.000  
33  33    11   78.820    21  0.52    32  0.94  molprobity  1.000  
34  34    11   75.380    24  0.54    37  0.70  molprobity  1.000  
35  35    11   79.900    25  0.48    39  0.67  molprobity  1.000  
36  36    12   87.670    22  0.78    34  1.23  molprobity  1.000  
37  37    12  110.720    22  0.43    34  1.30  molprobity  1.000  
38  38     7  126.340    15  0.93    23  0.96  molprobity  1.000  
39  39     7  119.620    15  0.90    23  0.79  molprobity  1.000  
40  40    12   98.320    22  0.64    34  1.41  molprobity  1.000  
41  41    11   83.390    25  0.53    39  0.73  molprobity  1.000  
42  42    11   72.610    21  0.61    32  0.80  molprobity  1.000  
43  43    11   59.550    25  0.50    39  0.69  molprobity  1.000  
44  44    11   46.220    24  0.57    37  0.85  molprobity  1.000  
45  45    11   44.870    25  0.55    39  0.80  molprobity  1.000  
46  46    11   47.950    25  0.39    39  0.70  molprobity  1.000  
47  47    11   54.480    25  0.71    39  0.81  molprobity  1.000  
48  48    11   60.720    25  0.68    39  0.73  molprobity  1.000  
49  49    11   57.610    24  0.60    37  0.57  molprobity  1.000  
50  50    11   63.330    21  0.64    32  0.66  molprobity  1.000  
51  51    12   62.830    22  0.76    34  1.29  molprobity  1.000  
52  52    11   60.420    24  0.48    37  0.70  molprobity  1.000  
53  53    11   58.460    24  0.59    37  0.64  molprobity  1.000  
54  54    12   72.720    24  0.38    35  0.70  molprobity  1.000  
55  55     ?   36.010     ?     ?     ?     ?  ?           0.500  
56  56     ?   44.710     ?     ?     ?     ?  ?           0.850  
57  57     ?   54.360     ?     ?     ?     ?  ?           1.000  
58  58     ?   61.650     ?     ?     ?     ?  ?           1.000  
59  59     ?   59.720     ?     ?     ?     ?  ?           1.000  
60  60     ?   69.520     ?     ?     ?     ?  ?           1.000  
61  61     8   53.250    23  2.98    34  3.17  mogul       1.000  
62  62     ?   61.390     ?     ?     ?     ?  ?           1.000  
63  63     ?   43.560     ?     ?     ?     ?  ?           1.000  
64  64     ?   43.070     ?     ?     ?     ?  ?           1.000  
65  65     ?   50.380     ?     ?     ?     ?  ?           1.000  
66  66     ?   50.030     ?     ?     ?     ?  ?           1.000  
67  67     ?   52.850     ?     ?     ?     ?  ?           1.000  
68  68     ?   46.600     ?     ?     ?     ?  ?           1.000  
69  69     ?   53.380     ?     ?     ?     ?  ?           1.000  
70  70     ?   42.590     ?     ?     ?     ?  ?           1.000  
71  71     ?   49.570     ?     ?     ?     ?  ?           1.000  
72  72     ?   58.010     ?     ?     ?     ?  ?           1.000  
73  73     ?   49.880     ?     ?     ?     ?  ?           1.000  
74  74     ?   38.180     ?     ?     ?     ?  ?           1.000  
75  75     ?   46.380     ?     ?     ?     ?  ?           1.000  
76  76     ?   42.930     ?     ?     ?     ?  ?           1.000  
77  77     ?   47.300     ?     ?     ?     ?  ?           1.000  
78  78     ?   57.860     ?     ?     ?     ?  ?           1.000  
79  79     ?   43.870     ?     ?     ?     ?  ?           1.000  
80  80     ?   45.120     ?     ?     ?     ?  ?           1.000  
81  81     ?   58.320     ?     ?     ?     ?  ?           1.000  
82  82     ?   56.000     ?     ?     ?     ?  ?           1.000  
83  83     ?   68.150     ?     ?     ?     ?  ?           1.000  
84  84     ?   53.510     ?     ?     ?     ?  ?           1.000  
85  85     ?   60.630     ?     ?     ?     ?  ?           1.000  
86  86     ?   45.740     ?     ?     ?     ?  ?           1.000  
87  87     ?   53.220     ?     ?     ?     ?  ?           1.000  
88  88     ?   66.310     ?     ?     ?     ?  ?           1.000  
89  89     ?   65.720     ?     ?     ?     ?  ?           1.000  
90  90     ?   69.320     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   1  "H1'"    1  0.51  1.91  
 2   2  "H5'"    1  0.51  1.91  
 3   3  "H2''"   2  0.41  2.56  
 4   4  C8       2  0.41  2.56  
 5  15  "H2''"   3  0.65  1.78  
 6  16  "H5''"   3  0.65  1.78  
 7  16  "H2''"   4  0.40  2.56  
 8  17  C8       4  0.40  2.56  
 9  19  "H1'"    5  0.52  1.90  
10  19  N3       6  0.49  2.28  
11  19  "H2'"    6  0.49  2.28  
12  20  "H5''"   5  0.52  1.90  
13  24  "H4'"    7  0.49  2.12  
14  25  "O5'"    7  0.49  2.12  
15  25  "H2''"   8  0.40  2.56  
16  26  C8       8  0.40  2.56  
17  27  "H2''"   9  0.63  1.79  
18  27  "H2'"   10  0.63  2.34  
19  28  "H5'"    9  0.63  1.79  
20  28  C6      10  0.63  2.34  
21  34  "H2''"  11  0.40  2.55  
22  35  C8      11  0.40  2.55  
23  39  "H5'"   12  0.81  1.62  
24  39  "H5'"   13  0.44  2.39  
25  40  "H4'"   12  0.81  1.62  
26  40  "H2''"  14  0.62  2.35  
27  40  "C4'"   13  0.44  2.39  
28  41  C8      14  0.62  2.35  
29  42  H6      15  0.60  1.67  
30  42  "H5''"  15  0.60  1.67  
31  42  "H5''"  16  0.41  2.53  
32  42  "H2''"  17  0.47  2.50  
33  42  C6      16  0.41  2.53  
34  43  C8      17  0.47  2.50  
35  61  N12     18  0.52  2.25  
36  61  H11     18  0.52  2.25  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
1  18  "O4'"  "C1'"  N1     112.208  108.000  0.700   6.01  
2  20  "O4'"  "C4'"  "C3'"  102.452  104.500  0.400  -5.12  
3  30  N3     C4     O4     122.910  119.900  0.600   5.02  
#
loop_
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2
_pdbx_vrpt_instance_mogul_bond_outliers.obsval
_pdbx_vrpt_instance_mogul_bond_outliers.mean
_pdbx_vrpt_instance_mogul_bond_outliers.numobs
_pdbx_vrpt_instance_mogul_bond_outliers.stdev
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff
1  61  C11  C15  1.54  1.48   170  0.01   5.70  0.02  
2  61  C13  N14  1.43  1.37   217  0.01   4.37  0.02  
3  61  C16  C19  1.53  1.50    85  0.01   2.39  0.00  
4  61  C17  C13  1.53  1.49  1454  0.02   2.51  0.00  
5  61  C13  N12  1.45  1.32   344  0.01   9.20  0.08  
6  61  C11  N12  1.47  1.38  4446  0.02   4.34  0.00  
7  61  C10  C11  1.32  1.35   242  0.01  -2.99  0.00  
8  61  C2   C10  1.53  1.46  6374  0.02   3.52  0.00  
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
 1  61  O18  C15  C11  125.94  130.96  170  0.56  -8.93  2.96  
 2  61  C11  C15  N14  106.99  103.37   32  0.47   7.65  2.60  
 3  61  C15  N14  C13  109.35  107.97   21  0.51   2.73  0.17  
 4  61  C16  N14  C13  124.84  127.35   87  0.89  -2.82  0.33  
 5  61  N14  C13  N12  109.89  112.95   43  1.43  -2.14  0.25  
 6  61  C15  C11  N12  105.46  108.93  170  0.70  -4.96  0.40  
 7  61  C11  N12  C13  108.31  105.77   94  0.74   3.43  0.54  
 8  61  C2   C10  C11  123.09  129.94  183  1.23  -5.59  1.75  
 9  61  C1   C6   C5   120.10  123.79   36  0.78  -4.71  2.12  
10  61  F8   C6   C5   121.19  117.13   69  0.74   5.47  2.60  
11  61  F7   C4   C5   119.94  117.13   69  0.74   3.78  1.35  
12  61  C3   C4   C5   120.27  123.79   36  0.78  -4.49  1.95  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
1  61  N14  C16  C19  F20  144.93  65.31  118  29.39  1.05  0.85  
2  61  N14  C16  C19  F21   24.85  73.28  118  53.85  3.51  1.69  
3  61  N14  C16  C19  F22  -94.71  49.15  118  22.78  3.87  0.85  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  16  0.784  0.263   1.657  
 2   2  20  0.887  0.174   0.038  
 3   3  20  0.891  0.153  -0.258  
 4   4  21  0.881  0.165  -0.023  
 5   5  22  0.897  0.178   0.320  
 6   6  20  0.937  0.140  -0.442  
 7   7  42  0.885  0.191   0.373  
 8   8  42  0.885  0.191   0.373  
 9   9  22  0.889  0.173   0.232  
10  10  22  0.896  0.168   0.144  
11  11  22  0.914  0.148  -0.208  
12  12  21  0.949  0.136  -0.465  
13  13  20  0.929  0.140  -0.442  
14  14  22  0.942  0.139  -0.366  
15  15  21  0.952  0.131  -0.541  
16  16  20  0.919  0.155  -0.230  
17  17  22  0.884  0.161   0.021  
18  18  19  0.886  0.138  -0.406  
19  19  22  0.894  0.163   0.056  
20  20  22  0.917  0.170   0.180  
21  21  19  0.946  0.124  -0.637  
22  22  21  0.930  0.132  -0.526  
23  23  22  0.893  0.160   0.004  
24  24  20  0.879  0.185   0.194  
25  25  22  0.954  0.111  -0.859  
26  26  22  0.937  0.130  -0.525  
27  27  22  0.915  0.145  -0.261  
28  28  19  0.875  0.199   0.601  
29  29  20  0.873  0.146  -0.357  
30  30  20  0.921  0.167  -0.061  
31  31  19  0.866  0.190   0.452  
32  32  22  0.903  0.141  -0.331  
33  33  19  0.905  0.174   0.188  
34  34  21  0.831  0.187   0.312  
35  35  22  0.867  0.182   0.391  
36  36  20  0.897  0.195   0.335  
37  37  20  0.873  0.248   1.083  
38  38  14  0.484  0.377   3.538  
39  39  14  0.540  0.406   4.017  
40  40  20  0.788  0.274   1.451  
41  41  22  0.859  0.167   0.127  
42  42  19  0.890  0.197   0.568  
43  43  22  0.886  0.178   0.320  
44  44  21  0.910  0.159  -0.114  
45  45  22  0.950  0.115  -0.789  
46  46  22  0.870  0.177   0.303  
47  47  22  0.851  0.198   0.673  
48  48  22  0.862  0.164   0.074  
49  49  21  0.839  0.199   0.495  
50  50  19  0.870  0.153  -0.158  
51  51  20  0.884  0.181   0.137  
52  52  21  0.870  0.165  -0.023  
53  53  21  0.924  0.162  -0.069  
54  54  22  0.923  0.207   0.831  
55  55   1  0.988  0.089       ?  
56  56   1  0.989  0.086       ?  
57  57   1  0.884  0.074       ?  
58  58   1  0.849  0.084       ?  
59  59   1  0.934  0.084       ?  
60  60   1  0.832  0.119       ?  
61  61  22  0.915  0.201       ?  
62  62   1  0.752  0.252       ?  
63  63   1  0.908  0.116       ?  
64  64   1  0.681  0.587       ?  
65  65   1  0.905  0.168       ?  
66  66   1  0.795  0.526       ?  
67  67   1  0.981  0.222       ?  
68  68   1  0.918  0.205       ?  
69  69   1  0.938  0.306       ?  
70  70   1  0.879  0.319       ?  
71  71   1  0.945  0.193       ?  
72  72   1  0.939  0.227       ?  
73  73   1  0.893  0.135       ?  
74  74   1  0.869  0.343       ?  
75  75   1  0.914  0.205       ?  
76  76   1  0.662  0.422       ?  
77  77   1  0.899  0.384       ?  
78  78   1  0.605  0.473       ?  
79  79   1  0.604  0.382       ?  
80  80   1  0.669  0.385       ?  
81  81   1  0.610  0.819       ?  
82  82   1  0.754  0.368       ?  
83  83   1  0.853  0.204       ?  
84  84   1  0.663  0.365       ?  
85  85   1  0.939  0.134       ?  
86  86   1  0.593  0.694       ?  
87  87   1  0.579  0.628       ?  
88  88   1  0.907  0.252       ?  
89  89   1  0.859  0.146       ?  
90  90   1  0.937  0.219       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          2.32.2                                                                Y  
4  dcc          "2.26  (2020-01-20)"                                                  Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
