data_7YIS

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  7YIS
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    7YIS
_pdbx_vrpt_summary.PDB_deposition_date         2022-07-18
_pdbx_vrpt_summary.PDB_revision_number         2
_pdbx_vrpt_summary.PDB_revision_date           2023-11-29
_pdbx_vrpt_summary.report_creation_date        2023-11-22:14:35
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3"  
2  non-polymer  "(2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE"  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  3.3  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore           
2  Ramachandran_outlier_percent  
3  rotamer_outliers_percent      
4  RSRZ_outliers_percent         
5  R_value_R_free                
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
 1  1  1   33.55  141614     ?     ?  
 2  2  1   66.06    1205  3.26  3.34  
 3  1  2  100.00  138981     ?     ?  
 4  2  2  100.00    1183  3.26  3.34  
 5  1  3  100.00  138945     ?     ?  
 6  2  3  100.00    1182  3.26  3.34  
 7  1  4   82.03  127900     ?     ?  
 8  2  4   82.42    1115  3.26  3.34  
 9  1  5   12.99  130704     ?     ?  
10  2  5   46.73    1149  3.26  3.34  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  5  3  A  1  1  A  100.00  
4  6  3  A  1  1  A  100.00  
5  7  4  A  1  1  A   82.03  
6  8  4  A  1  1  A   82.42  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      0.52
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.28
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   813
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  1095
#
_pdbx_vrpt_summary_geometry.ordinal                        1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers  0.00
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers       0.00
_pdbx_vrpt_summary_geometry.clashscore                     8.46
_pdbx_vrpt_summary_geometry.num_H_reduce                   817
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                 813
_pdbx_vrpt_summary_geometry.bonds_RMSZ                     0.28
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                1095
_pdbx_vrpt_summary_geometry.angles_RMSZ                    0.52
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            31.499
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         63.751
_pdbx_vrpt_summary_diffraction.I_over_sigma              3.50(3.32A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        2633
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.347
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.458
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.283
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.878
_pdbx_vrpt_summary_diffraction.DCC_R                     0.22
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.28
_pdbx_vrpt_summary_diffraction.EDS_R                     0.23
_pdbx_vrpt_summary_diffraction.EDS_res_high              3.30
_pdbx_vrpt_summary_diffraction.EDS_res_low               32.11
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[68.792,68.792,49.148,-0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.316
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 11.18% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         0
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         87.73
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      251
_pdbx_vrpt_summary_diffraction.percent_free_reflections  9.53
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     1.02
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       3.30
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        32.11
_pdbx_vrpt_summary_diffraction.PDB_R                     0.23
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.28
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_chiral_outliers
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
_pdbx_vrpt_model_instance.ligand_of_interest
 1  1  1  A    4  LEU  A  286  .  ?        ?     ?     ?     ?     ?  ?     
 2  1  1  A    5  THR  A  287  .  ?        ?     ?     ?     ?     ?  ?     
 3  1  1  A    6  PRO  A  288  .  ?        ?     ?     ?     ?     ?  ?     
 4  1  1  A    7  LEU  A  289  .  ?        ?     ?     ?     ?     ?  ?     
 5  1  1  A    8  LEU  A  290  .  ?        2     ?     ?     ?     ?  ?     
 6  1  1  A    9  SER  A  291  .  ?        ?     ?     ?     ?     ?  ?     
 7  1  1  A   10  GLY  A  292  .  ?        ?     ?     ?     ?     ?  ?     
 8  1  1  A   11  TRP  A  293  .  ?        ?     ?     ?     ?     ?  ?     
 9  1  1  A   12  LEU  A  294  .  ?        ?     ?     ?     ?     ?  ?     
10  1  1  A   13  ASP  A  295  .  ?        ?     ?     ?     ?     ?  ?     
11  1  1  A   14  LYS  A  296  .  ?        ?     ?     ?     ?     ?  ?     
12  1  1  A   15  LEU  A  297  .  ?        ?     ?     ?     ?     ?  ?     
13  1  1  A   16  SER  A  298  .  ?        ?     ?     ?     ?     ?  ?     
14  1  1  A   17  PRO  A  299  .  ?        ?     ?     ?     ?     ?  ?     
15  1  1  A   18  GLN  A  300  .  ?        ?     ?     ?     ?     ?  ?     
16  1  1  A   19  GLY  A  301  .  ?        ?     ?     ?     ?     ?  ?     
17  1  1  A   20  ASN  A  302  .  ?        ?     ?     ?     ?     ?  ?     
18  1  1  A   21  TYR  A  303  .  ?        ?     ?     ?     ?     ?  ?     
19  1  1  A   22  VAL  A  304  .  ?        1     ?     ?     ?     ?  ?     
20  1  1  A   23  PHE  A  305  .  ?        ?     ?     ?     ?     ?  ?     
21  1  1  A   24  GLN  A  306  .  ?        ?     ?     ?     ?     ?  ?     
22  1  1  A   25  ARG  A  307  .  ?        ?     ?     ?     ?     ?  ?     
23  1  1  A   26  ARG  A  308  .  ?        ?     ?     ?     ?     ?  ?     
24  1  1  A   27  PHE  A  309  .  ?        ?     ?     ?     ?     ?  ?     
25  1  1  A   28  VAL  A  310  .  ?        2     ?     ?     ?     ?  ?     
26  1  1  A   29  GLN  A  311  .  ?        ?     ?     ?     ?     ?  ?     
27  1  1  A   30  PHE  A  312  .  ?        ?     ?     ?     ?     ?  ?     
28  1  1  A   31  ASN  A  313  .  ?        ?     ?     ?     ?     ?  ?     
29  1  1  A   32  GLY  A  314  .  ?        ?     ?     ?     ?     ?  ?     
30  1  1  A   33  ARG  A  315  .  ?        ?     ?     ?     ?     ?  ?     
31  1  1  A   34  SER  A  316  .  ?        ?     ?     ?     ?     ?  ?     
32  1  1  A   35  LEU  A  317  .  ?        ?     ?     ?     ?     ?  ?     
33  1  1  A   36  MET  A  318  .  ?        1     ?     ?     ?     ?  ?     
34  1  1  A   37  TYR  A  319  .  ?        2     ?     ?     ?     ?  ?     
35  1  1  A   38  PHE  A  320  .  ?        ?     ?     ?     ?     ?  ?     
36  1  1  A   39  GLY  A  321  .  ?        ?     ?     ?     ?     ?  ?     
37  1  1  A   40  SER  A  322  .  ?        ?     ?     ?     ?     ?  ?     
38  1  1  A   41  ASP  A  323  .  ?        2     ?     ?     ?     ?  ?     
39  1  1  A   42  LYS  A  324  .  ?        ?     ?     ?     ?     ?  ?     
40  1  1  A   43  ASP  A  325  .  ?        ?     ?     ?     ?     ?  ?     
41  1  1  A   44  PRO  A  326  .  ?        ?     ?     ?     ?     ?  ?     
42  1  1  A   45  PHE  A  327  .  ?        ?     ?     ?     ?     ?  ?     
43  1  1  A   46  PRO  A  328  .  ?        ?     ?     ?     ?     ?  ?     
44  1  1  A   47  LYS  A  329  .  ?        ?     ?     ?     ?     ?  ?     
45  1  1  A   48  GLY  A  330  .  ?        1     ?     ?     ?     ?  ?     
46  1  1  A   49  VAL  A  331  .  ?        1     ?     ?     ?     ?  ?     
47  1  1  A   50  ILE  A  332  .  ?        ?     ?     ?     ?     ?  ?     
48  1  1  A   51  PRO  A  333  .  ?        ?     ?     ?     ?     ?  ?     
49  1  1  A   52  LEU  A  334  .  ?        1     ?     ?     ?     ?  ?     
50  1  1  A   53  THR  A  335  .  ?        ?     ?     ?     ?     ?  ?     
51  1  1  A   54  ALA  A  336  .  ?        ?     ?     ?     ?     ?  ?     
52  1  1  A   55  ILE  A  337  .  ?        2     ?     ?     ?     ?  ?     
53  1  1  A   56  GLU  A  338  .  ?        ?     ?     ?     ?     ?  ?     
54  1  1  A   57  MET  A  339  .  ?        1     ?     ?     ?     ?  ?     
55  1  1  A   58  THR  A  340  .  ?        ?     ?     ?     ?     ?  ?     
56  1  1  A   59  ARG  A  341  .  ?        ?     ?     ?     ?     ?  ?     
57  1  1  A   60  SER  A  342  .  ?        ?     ?     ?     ?     ?  ?     
58  1  1  A   61  SER  A  343  .  ?        1     ?     ?     ?     ?  ?     
59  1  1  A   62  LYS  A  344  .  ?        ?     ?     ?     ?     ?  ?     
60  1  1  A   63  ASP  A  345  .  ?        ?     ?     ?     ?     ?  ?     
61  1  1  A   64  ASN  A  346  .  ?        1     ?     ?     ?     ?  ?     
62  1  1  A   65  LYS  A  347  .  ?        1     ?     ?     ?     ?  ?     
63  1  1  A   66  PHE  A  348  .  ?        1     ?     ?     ?     ?  ?     
64  1  1  A   67  GLN  A  349  .  ?        ?     ?     ?     ?     ?  ?     
65  1  1  A   68  VAL  A  350  .  ?        ?     ?     ?     ?     ?  ?     
66  1  1  A   69  ILE  A  351  .  ?        1     ?     ?     ?     ?  ?     
67  1  1  A   70  THR  A  352  .  ?        ?     ?     ?     ?     ?  ?     
68  1  1  A   71  GLY  A  353  .  ?        ?     ?     ?     ?     ?  ?     
69  1  1  A   72  GLN  A  354  .  ?        ?     ?     ?     ?     ?  ?     
70  1  1  A   73  ARG  A  355  .  ?        1     ?     ?     ?     ?  ?     
71  1  1  A   74  VAL  A  356  .  ?        ?     ?     ?     ?     ?  ?     
72  1  1  A   75  PHE  A  357  .  ?        ?     ?     ?     ?     ?  ?     
73  1  1  A   76  VAL  A  358  .  ?        ?     ?     ?     ?     ?  ?     
74  1  1  A   77  PHE  A  359  .  ?        ?     ?     ?     ?     ?  ?     
75  1  1  A   78  ARG  A  360  .  ?        ?     ?     ?     ?     ?  ?     
76  1  1  A   79  THR  A  361  .  ?        1     ?     ?     ?     ?  ?     
77  1  1  A   80  GLU  A  362  .  ?        ?     ?     ?     ?     ?  ?     
78  1  1  A   81  SER  A  363  .  ?        ?     ?     ?     ?     ?  ?     
79  1  1  A   82  GLU  A  364  .  ?        ?     ?     ?     ?     ?  ?     
80  1  1  A   83  ALA  A  365  .  ?        ?     ?     ?     ?     ?  ?     
81  1  1  A   84  GLN  A  366  .  ?        ?     ?     ?     ?     ?  ?     
82  1  1  A   85  ARG  A  367  .  ?        1     ?     ?     ?     ?  ?     
83  1  1  A   86  ASP  A  368  .  ?        ?     ?     ?     ?     ?  ?     
84  1  1  A   87  MET  A  369  .  ?        ?     ?     ?     ?     ?  ?     
85  1  1  A   88  TRP  A  370  .  ?        1     ?     ?     ?     ?  ?     
86  1  1  A   89  CYS  A  371  .  ?        ?     ?     ?     ?     ?  ?     
87  1  1  A   90  SER  A  372  .  ?        ?     ?     ?     ?     ?  ?     
88  1  1  A   91  THR  A  373  .  ?        ?     ?     ?     ?     ?  ?     
89  1  1  A   92  LEU  A  374  .  ?        ?     ?     ?     ?     ?  ?     
90  1  1  A   93  GLN  A  375  .  ?        ?     ?     ?     ?     ?  ?     
91  1  1  A   94  SER  A  376  .  ?        ?     ?     ?     ?     ?  ?     
92  1  1  A   95  CYS  A  377  .  ?        ?     ?     ?     ?     ?  ?     
93  1  1  A   96  LEU  A  378  .  ?        1     ?     ?     ?     ?  ?     
94  1  1  A   97  LYS  A  379  .  ?        ?     ?     ?     ?     ?  ?     
95  1  1  A   98  GLU  A  380  .  ?        ?     ?     ?     ?     ?  ?     
96  1  1  A   99  GLN  A  381  .  ?        ?     ?     ?     ?     ?  ?     
97  1  1  A  100  ARG  A  382  .  ?        ?     ?     ?     ?     ?  ?     
98  1  1  A  101  LEU  A  383  .  ?        ?     ?     ?     ?     ?  ?     
99  1  2  B    .  4PT  A  401  .  ?        2     1     3     4    15  Y     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.ligand_chirality_outlier
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1  pp            ?       ?  ?        10   96.450  ?      8  0.40  11  1.19  molprobity  1.000  
 2   2  p          50.3    74.1  Allowed   7   88.530  ?      7  0.24  11  0.56  molprobity  1.000  
 3   3  Cg_exo    -69.7    84.0  Allowed   7   74.600  ?      8  0.27  11  0.47  molprobity  1.000  
 4   4  mt        -43.8   -59.5  Favored  11   63.090  ?      8  0.24  11  0.54  molprobity  1.000  
 5   5  tp       -100.8   131.5  Favored  11   45.570  ?      8  0.16  11  0.46  molprobity  1.000  
 6   6  m        -143.7   145.9  Favored   5   54.550  ?      6  0.38   8  0.75  molprobity  1.000  
 7   7  ?         176.9   162.4  Favored   3   52.640  ?      4  0.31   5  0.79  molprobity  1.000  
 8   8  m95       -91.8   117.4  Favored  10   56.530  ?     16  0.21  23  0.31  molprobity  1.000  
 9   9  mt       -124.9   152.9  Favored  11   43.120  ?      8  0.18  11  0.47  molprobity  1.000  
10  10  m-20      -90.1   109.7  Favored   4   47.070  ?      8  0.21  11  0.36  molprobity  1.000  
11  11  tttm      -97.8   131.1  Favored  13   40.440  ?      9  0.27  11  0.27  molprobity  1.000  
12  12  tp        -66.4   139.0  Favored  11   40.130  ?      8  0.20  11  0.41  molprobity  1.000  
13  13  t        -101.9   139.4  Favored   5   43.360  ?      6  0.22   9  0.36  molprobity  1.000  
14  14  Cg_endo   -62.9   -24.6  Favored   7   44.460  ?      8  0.34  11  0.26  molprobity  1.000  
15  15  tp60      -75.8   145.3  Favored   8   60.340  ?      9  0.39  12  0.36  molprobity  1.000  
16  16  ?          70.0  -167.6  Favored   3   66.220  ?      4  0.41   5  0.78  molprobity  1.000  
17  17  t-20     -122.0   116.5  Favored   6   73.940  ?      8  0.27  11  0.48  molprobity  1.000  
18  18  m-85       55.2    56.5  Favored   9   74.300  ?     13  0.28  18  0.50  molprobity  1.000  
19  19  t        -118.0   119.4  Favored   9   50.900  ?      7  0.28  10  0.47  molprobity  1.000  
20  20  m-85     -105.0   161.4  Favored   9   43.740  ?     12  0.34  16  0.31  molprobity  1.000  
21  21  mt-30    -138.6   136.0  Favored   8   46.730  ?      9  0.23  12  0.33  molprobity  1.000  
22  22  mtp85     -75.2   116.2  Favored  13   60.590  ?     11  0.23  14  0.88  molprobity  1.000  
23  23  mmt-85   -127.0   140.6  Favored  13   48.490  ?     11  0.21  14  0.92  molprobity  1.000  
24  24  t80       -86.4   111.6  Favored   9   51.290  ?     12  0.35  16  0.37  molprobity  1.000  
25  25  m        -107.0   147.1  Favored   9   44.720  ?      7  0.39  10  0.51  molprobity  1.000  
26  26  mt-30    -132.2   150.2  Favored   8   49.820  ?      9  0.33  12  0.57  molprobity  1.000  
27  27  t80      -137.7   115.6  Favored   9   49.200  ?     12  0.41  16  0.34  molprobity  1.000  
28  28  p30      -103.7     4.5  Favored   6   58.680  ?      8  0.22  11  0.54  molprobity  1.000  
29  29  ?          97.0   -13.1  Favored   3   53.510  ?      4  0.37   5  0.57  molprobity  1.000  
30  30  ?        -119.3   -31.2  Favored   2   51.400  ?      5  0.18   7  0.59  molprobity  1.000  
31  31  p        -152.6   149.6  Favored   5   57.130  ?      6  0.30   8  0.58  molprobity  1.000  
32  32  tp       -100.6   107.9  Favored  11   42.880  ?      8  0.21  11  0.72  molprobity  1.000  
33  33  mtm      -107.0   142.2  Favored   9   47.600  ?      8  0.28  10  0.50  molprobity  1.000  
34  34  p90      -129.4   133.5  Favored   9   41.880  ?     13  0.29  18  0.54  molprobity  1.000  
35  35  m-85     -114.5   154.8  Favored   9   56.560  ?     12  0.41  16  0.49  molprobity  1.000  
36  36  ?         -64.7   -36.5  Favored   3   50.140  ?      4  0.18   5  0.38  molprobity  1.000  
37  37  t        -146.0   154.7  Favored   5   59.510  ?      6  0.29   8  0.60  molprobity  1.000  
38  38  p-10      -67.1   -18.4  Favored   4   61.280  ?      8  0.15  11  0.26  molprobity  1.000  
39  39  mttp      -87.6    -6.9  Favored  13   74.740  ?      9  0.29  11  0.48  molprobity  1.000  
40  40  m-20      -74.6   127.8  Favored   4   72.620  ?      8  0.27  12  0.34  molprobity  1.000  
41  41  Cg_exo    -68.5   -41.9  Favored   7   76.120  ?      8  0.28  11  0.49  molprobity  1.000  
42  42  m-85     -103.8   138.1  Favored   9   84.810  ?     12  0.45  17  0.31  molprobity  1.000  
43  43  Cg_endo   -72.6   151.2  Favored   7   60.250  ?      8  0.15  11  0.42  molprobity  1.000  
44  44  mttt      -71.2   -26.0  Favored  13   47.570  ?      9  0.35  11  0.69  molprobity  1.000  
45  45  ?        -165.2   149.9  Favored   3   51.800  ?      4  0.32   5  0.57  molprobity  1.000  
46  46  t        -128.1   128.8  Favored   9   47.400  ?      7  0.27  10  0.43  molprobity  1.000  
47  47  mt       -119.5    99.5  Favored  11   45.350  ?      8  0.27  12  0.56  molprobity  1.000  
48  48  Cg_exo    -61.9   143.0  Favored   7   49.870  ?      8  0.13  11  0.38  molprobity  1.000  
49  49  tp        -60.6   -31.2  Favored  11   55.340  ?      8  0.20  11  0.31  molprobity  1.000  
50  50  p         -62.4   -35.6  Favored   7   57.560  ?      7  0.21  10  0.60  molprobity  1.000  
51  51  ?         -74.8   -21.6  Favored   5   54.340  ?      5  0.29   7  0.36  molprobity  1.000  
52  52  mm        -66.8   125.5  Favored  11   56.190  ?      8  0.32  11  0.45  molprobity  1.000  
53  53  mt-10    -100.8   -28.9  Favored   6   60.670  ?      9  0.24  12  0.31  molprobity  1.000  
54  54  ttp      -165.3   157.2  Favored   9   54.970  ?      8  0.32  10  0.68  molprobity  1.000  
55  55  m        -141.2   123.1  Favored   7   52.070  ?      7  0.24  10  0.59  molprobity  1.000  
56  56  ptt85    -138.2   148.0  Favored  13   64.170  ?     11  0.21  14  0.96  molprobity  1.000  
57  57  t         -72.5   161.5  Favored   5   60.710  ?      6  0.25   8  0.46  molprobity  1.000  
58  58  m        -119.8  -172.9  Favored   5   71.850  ?      6  0.20   8  0.50  molprobity  1.000  
59  59  mttt      -60.4   -62.5  Allowed  13   92.820  ?      9  0.25  11  0.29  molprobity  1.000  
60  60  m-20      -83.6  -165.8  Allowed   4  100.370  ?      8  0.27  11  0.44  molprobity  1.000  
61  61  p-10      -69.2    76.6  Allowed   6   65.700  ?      8  0.25  11  0.64  molprobity  1.000  
62  62  ttmm     -144.8   148.3  Favored  13   56.400  ?      9  0.26  11  0.58  molprobity  1.000  
63  63  p90      -143.1   150.3  Favored   9   40.980  ?     12  0.24  16  0.45  molprobity  1.000  
64  64  mt-30    -107.8   132.5  Favored   8   47.530  ?      9  0.31  12  0.44  molprobity  1.000  
65  65  t        -109.7   109.9  Favored   9   41.540  ?      7  0.48  10  0.59  molprobity  1.000  
66  66  mt       -107.6   119.2  Favored  11   48.170  ?      8  0.27  11  0.44  molprobity  1.000  
67  67  p        -101.3  -171.9  Favored   7   49.840  ?      7  0.26  10  0.58  molprobity  1.000  
68  68  ?         -66.3   -32.8  Favored   3   47.310  ?      4  0.24   5  0.19  molprobity  1.000  
69  69  mt-30    -111.2   -32.1  Favored   8   59.590  ?      9  0.25  12  0.65  molprobity  1.000  
70  70  ttp85    -137.2   158.3  Favored  13   42.310  ?     11  0.24  14  1.03  molprobity  1.000  
71  71  p        -116.4   130.4  Favored   9   45.460  ?      7  0.30  10  0.46  molprobity  1.000  
72  72  m-85     -102.8   130.5  Favored   9   38.410  ?     12  0.35  16  0.33  molprobity  1.000  
73  73  t        -110.1   120.5  Favored   9   37.970  ?      7  0.32  10  0.46  molprobity  1.000  
74  74  m-85     -117.7   138.5  Favored   9   37.250  ?     12  0.35  16  0.32  molprobity  1.000  
75  75  ttp180   -115.0   128.7  Favored  13   43.300  ?     11  0.26  14  0.86  molprobity  1.000  
76  76  p         -96.9  -174.9  Favored   7   48.140  ?      7  0.23  10  0.57  molprobity  1.000  
77  77  mm-40     -92.5   -26.6  Favored   6   51.530  ?      9  0.30  12  0.37  molprobity  1.000  
78  78  p        -142.6   161.5  Favored   5   51.460  ?      6  0.28   8  0.53  molprobity  1.000  
79  79  pt-20     -65.3   -32.3  Favored   6   73.730  ?      9  0.20  12  0.26  molprobity  1.000  
80  80  ?         -63.0   -44.8  Favored   5   53.990  ?      5  0.25   7  0.21  molprobity  1.000  
81  81  tt0       -63.1   -43.0  Favored   8   51.130  ?      9  0.28  12  0.33  molprobity  1.000  
82  82  tmm_?     -61.1   -43.1  Favored  13   52.420  ?     11  0.22  14  1.00  molprobity  1.000  
83  83  m-20      -65.4   -38.2  Favored   4   56.890  ?      8  0.22  11  0.38  molprobity  1.000  
84  84  ttm       -65.6   -45.1  Favored   9   49.860  ?      8  0.27  10  0.34  molprobity  1.000  
85  85  m95       -62.4   -43.5  Favored  10   43.010  ?     16  0.41  23  0.24  molprobity  1.000  
86  86  t         -70.4   -41.5  Favored   5   54.270  ?      6  0.26   8  0.32  molprobity  1.000  
87  87  p         -65.1   -41.5  Favored   5   54.900  ?      6  0.23   8  0.25  molprobity  1.000  
88  88  m         -62.4   -45.1  Favored   7   50.810  ?      7  0.21  10  0.40  molprobity  1.000  
89  89  mt        -64.7   -40.1  Favored  11   49.900  ?      8  0.18  11  0.36  molprobity  1.000  
90  90  mt-30     -65.4   -39.0  Favored   8   56.440  ?      9  0.25  12  0.26  molprobity  1.000  
91  91  m         -62.5   -47.6  Favored   5   61.030  ?      6  0.21   8  0.26  molprobity  1.000  
92  92  m         -66.0   -38.4  Favored   5   66.360  ?      6  0.46   8  0.27  molprobity  1.000  
93  93  mt        -60.9   -41.8  Favored  11   75.420  ?      8  0.21  11  0.33  molprobity  1.000  
94  94  tttt      -66.2   -41.3  Favored  13   83.620  ?      9  0.28  11  0.32  molprobity  1.000  
95  95  mp0       -73.7   -31.8  Favored   6   90.680  ?      9  0.28  12  0.41  molprobity  1.000  
96  96  pt20      -68.8   -19.7  Favored   8   77.950  ?      9  0.28  12  0.37  molprobity  1.000  
97  97  mtt180    -89.4     0.3  Favored  13   87.980  ?     11  0.19  14  0.89  molprobity  1.000  
98  98  mt            ?       ?  ?        11   73.110  ?      7  0.21   8  0.18  molprobity  1.000  
99  99  ?             ?       ?  ?        27   61.530  Y     43  1.50  58  1.23  mogul       1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   5  HD12   1  0.44  1.81  
 2   5  HA     1  0.44  1.81  
 3  19  HG21   2  0.48  1.95  
 4  25  HG12   3  0.50  1.93  
 5  25  HG23   4  0.40  2.56  
 6  33  HG2    5  0.67  1.77  
 7  34  HB3    3  0.50  1.93  
 8  34  CZ     6  0.42  2.55  
 9  38  OD1    7  0.43  2.52  
10  38  N      7  0.43  2.52  
11  45  HA3    6  0.42  2.55  
12  46  HG22   5  0.67  1.77  
13  49  HA     8  0.56  1.88  
14  52  HG12   8  0.56  1.88  
15  52  HG22   9  0.46  1.97  
16  54  HE2   10  0.53  1.90  
17  58  HB2   11  0.68  1.75  
18  61  ND2   12  0.55  2.40  
19  62  HB3   11  0.68  1.75  
20  63  HD1   13  0.49  1.76  
21  66  HD12  10  0.53  1.90  
22  70  NH2   14  0.49  2.45  
23  76  O     12  0.55  2.40  
24  82  HG2   13  0.49  1.76  
25  85  CH2    4  0.40  2.56  
26  93  HD11   9  0.46  1.97  
27  99  OP6   14  0.49  2.45  
28  99  H0N1   2  0.48  1.95  
#
_pdbx_vrpt_instance_stereo_outliers.ordinal        1
_pdbx_vrpt_instance_stereo_outliers.instance_id    99
_pdbx_vrpt_instance_stereo_outliers.label_atom_id  C0G
_pdbx_vrpt_instance_stereo_outliers.problem        PLANAR
#
loop_
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2
_pdbx_vrpt_instance_mogul_bond_outliers.obsval
_pdbx_vrpt_instance_mogul_bond_outliers.mean
_pdbx_vrpt_instance_mogul_bond_outliers.numobs
_pdbx_vrpt_instance_mogul_bond_outliers.stdev
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff
1  99  O0D  C0C  1.40  1.44   204  0.01  -2.77  0.00  
2  99  O0D  C0G  1.34  1.41  7687  0.03  -2.56  0.00  
3  99  O0H  C0G  1.21  1.39   114  0.03  -6.36  0.02  
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  99  C0G  O0D  C0C  109.75  115.20    41  2.00  -2.73  2.18  
2  99  O0F  C0L  C0N  119.40  111.91  1023  3.14   2.39  0.01  
3  99  O0D  C0G  C0I  120.30  110.05    24  4.49   2.28  5.32  
4  99  O0H  C0G  C0I  120.00  109.12   123  1.85   5.87  5.44  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
 1  99  O0M  C0L  O0F  C0E   -27.68  21.78  3879   4.47   0.06  2.63  
 2  99  C0N  C0L  O0F  C0E   152.13  22.05  2229   4.83   0.20  2.33  
 3  99  O0D  C0C  C0E  O0F   108.60  48.05   279  14.76   1.25  1.43  
 4  99  C0B  C0C  C0E  O0F  -130.50  62.97   240  21.93   0.16  1.67  
 5  99  OP1  C0B  C0C  C0E   -98.29  50.00   257  19.82   0.60  1.56  
 6  99  OP1  C0B  C0C  O0D    22.50  75.64   287  49.05   0.06  1.05  
 7  99  O0H  C0G  O0D  C0C  -115.77  45.44    15   8.84  24.98  0.00  
 8  99  C0I  C0G  O0D  C0C    64.15  76.44    48  28.21   1.25  4.17  
 9  99  C0B  OP1  P1   OP3  -145.21  62.62    43  33.17   7.76  2.33  
10  99  C0B  OP1  P1   OP2    95.03  56.05    43  17.52   5.68  2.33  
11  99  C0B  OP1  P1   O1    -25.77  46.42   174  21.20   6.66  0.57  
12  99  C5   O5   P5   OP8    79.57  47.41    46  26.45  11.89  0.00  
13  99  C0L  C0N  C0P  C0Q  -132.74  50.53   229  17.52   1.61  0.87  
14  99  O0H  C0G  C0I  C0J   -99.75  34.96   115  12.84   0.80  1.74  
15  99  C0G  C0I  C0J  C0K  -118.79  53.28    40   6.16  34.72  0.00  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1   8  0.814  0.400   1.159  
 2   2   7  0.845  0.263   0.517  
 3   3   7  0.921  0.245   0.274  
 4   4   8  0.885  0.255  -0.112  
 5   5   8  0.974  0.208  -0.524  
 6   6   6  0.960  0.174  -0.310  
 7   7   4  0.975  0.119  -0.749  
 8   8  14  0.908  0.216  -0.255  
 9   9   8  0.981  0.162  -0.927  
10  10   8  0.952  0.256   0.404  
11  11   9  0.976  0.179  -0.837  
12  12   8  0.957  0.204  -0.559  
13  13   6  0.964  0.130  -0.771  
14  14   7  0.972  0.173  -0.443  
15  15   9  0.902  0.310   0.650  
16  16   4  0.918  0.177  -0.228  
17  17   8  0.906  0.193  -0.225  
18  18  12  0.887  0.256   0.059  
19  19   7  0.968  0.221  -0.267  
20  20  11  0.974  0.201  -0.553  
21  21   9  0.964  0.206  -0.347  
22  22  11  0.885  0.280   0.058  
23  23  11  0.961  0.180  -0.732  
24  24  11  0.971  0.195  -0.606  
25  25   7  0.981  0.172  -0.704  
26  26   9  0.947  0.217  -0.242  
27  27  11  0.960  0.238  -0.229  
28  28   8  0.974  0.146  -0.721  
29  29   4  0.973  0.194  -0.075  
30  30   5  0.968  0.146  -1.001  
31  31   6  0.964  0.178  -0.268  
32  32   8  0.970  0.198  -0.612  
33  33   8  0.962  0.319   0.787  
34  34  12  0.975  0.232  -0.163  
35  35  11  0.956  0.305   0.358  
36  36   4  0.964  0.175  -0.246  
37  37   6  0.956  0.247   0.456  
38  38   8  0.933  0.162  -0.563  
39  39   9  0.914  0.447   1.254  
40  40   8  0.954  0.299   0.847  
41  41   7  0.940  0.254   0.363  
42  42  11  0.813  0.465   1.761  
43  43   7  0.960  0.299   0.811  
44  44   9  0.931  0.307   0.161  
45  45   4  0.931  0.260   0.517  
46  46   7  0.946  0.417   1.483  
47  47   8  0.974  0.238  -0.216  
48  48   7  0.978  0.262   0.443  
49  49   8  0.982  0.294   0.230  
50  50   7  0.929  0.327   1.192  
51  51   5  0.957  0.284   0.622  
52  52   8  0.942  0.325   0.571  
53  53   9  0.947  0.196  -0.529  
54  54   8  0.979  0.142  -0.856  
55  55   7  0.965  0.192  -0.231  
56  56  11  0.923  0.253  -0.156  
57  57   6  0.962  0.162  -0.435  
58  58   6  0.923  0.166  -0.393  
59  59   9  0.648  0.506   1.714  
60  60   8  0.798  0.290   0.754  
61  61   8  0.916  0.230   0.166  
62  62   9  0.909  0.258  -0.221  
63  63  11  0.981  0.155  -0.956  
64  64   9  0.965  0.235  -0.069  
65  65   7  0.984  0.150  -0.901  
66  66   8  0.969  0.226  -0.325  
67  67   7  0.952  0.212  -0.020  
68  68   4  0.970  0.144  -0.524  
69  69   9  0.916  0.251   0.084  
70  70  11  0.944  0.157  -0.914  
71  71   7  0.975  0.147  -0.928  
72  72  11  0.957  0.232  -0.281  
73  73   7  0.970  0.201  -0.446  
74  74  11  0.960  0.199  -0.571  
75  75  11  0.970  0.256  -0.132  
76  76   7  0.968  0.229   0.159  
77  77   9  0.937  0.219  -0.328  
78  78   6  0.961  0.222   0.194  
79  79   9  0.867  0.260   0.032  
80  80   5  0.948  0.147  -0.652  
81  81   9  0.935  0.194  -0.462  
82  82  11  0.962  0.173  -0.788  
83  83   8  0.930  0.148  -0.707  
84  84   8  0.954  0.155  -0.735  
85  85  14  0.971  0.170  -0.715  
86  86   6  0.890  0.181  -0.088  
87  87   6  0.963  0.176  -0.289  
88  88   7  0.967  0.136  -0.821  
89  89   8  0.985  0.240  -0.244  
90  90   9  0.917  0.249   0.065  
91  91   6  0.950  0.111  -0.971  
92  92   6  0.946  0.185  -0.041  
93  93   8  0.930  0.307   0.344  
94  94   9  0.897  0.471   1.441  
95  95   9  0.904  0.454   1.732  
96  96   9  0.928  0.527   2.731  
97  97  11  0.831  0.370   0.769  
98  98   8  0.786  0.341   0.642  
99  99  43  0.936  0.232       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          2.36                                                                  Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
