data_6TFG

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  6TFG
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    6TFG
_pdbx_vrpt_summary.PDB_deposition_date         2019-11-14
_pdbx_vrpt_summary.PDB_revision_number         2
_pdbx_vrpt_summary.PDB_revision_date           2024-01-24
_pdbx_vrpt_summary.RNA_suiteness               0.65
_pdbx_vrpt_summary.report_creation_date        2024-06-24:11:09
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "Chains: A"  
2  non-polymer  "MAGNESIUM ION"  
3  non-polymer  "SODIUM ION"  
4  non-polymer  "3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE"  
5  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  2  
D  2  
E  2  
F  2  
G  2  
H  3  
I  3  
J  3  
K  3  
L  3  
M  4  
N  5  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  2.45  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
4  RNAsuiteness_percent   
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1   99.96  141614     ?     ?  
2  2  1  100.00    1613  2.44  2.48  
3  1  2  100.00  127900     ?     ?  
4  2  2  100.00    1523  2.44  2.48  
5  1  3   57.97  130704     ?     ?  
6  2  3   82.81    1544  2.44  2.48  
7  1  4   74.40    3102     ?     ?  
8  2  4   71.73    1001  2.12  2.80  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      0.87
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.43
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   1243
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  1937
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       0.00
_pdbx_vrpt_summary_geometry.num_H_reduce     578
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   1243
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.43
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1937
_pdbx_vrpt_summary_geometry.angles_RMSZ      0.87
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 120.531
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            50.005
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         77.126
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.50(2.45A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        12229
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.402
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.250
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.493
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.326
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.969
_pdbx_vrpt_summary_diffraction.twin_fraction             -k,-h,-l:0.030
_pdbx_vrpt_summary_diffraction.DCC_R                     0.20
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.23
_pdbx_vrpt_summary_diffraction.EDS_R                     0.21
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.45
_pdbx_vrpt_summary_diffraction.EDS_res_low               47.76
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[75.732,105.733,55.005,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.644
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 10.74% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         0
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         98.61
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      635
_pdbx_vrpt_summary_diffraction.percent_free_reflections  5.19
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.45
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        47.76
_pdbx_vrpt_summary_diffraction.PDB_R                     0.19
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.23
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_symm_clashes
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
_pdbx_vrpt_model_instance.ligand_of_interest
 1  1  1  A   1  G    A    1  .  ?        ?     ?     ?     ?  ?     
 2  1  1  A   2  G    A    2  .  ?        ?     ?     ?     ?  ?     
 3  1  1  A   3  C    A    3  .  ?        ?     ?     ?     ?  ?     
 4  1  1  A   4  U    A    4  .  ?        ?     ?     ?     ?  ?     
 5  1  1  A   5  U    A    5  .  ?        ?     ?     ?     ?  ?     
 6  1  1  A   6  C    A    6  .  ?        ?     ?     ?     ?  ?     
 7  1  1  A   7  A    A    7  .  ?        ?     ?     ?     ?  ?     
 8  1  1  A   8  A    A    8  .  ?        ?     ?     ?     ?  ?     
 9  1  1  A   9  C    A    9  .  ?        ?     ?     ?     ?  ?     
10  1  1  A  10  A    A   10  .  ?        ?     ?     ?     ?  ?     
11  1  1  A  11  A    A   11  .  ?        1     ?     ?     ?  ?     
12  1  1  A  12  C    A   12  .  ?        ?     ?     ?     ?  ?     
13  1  1  A  13  C    A   13  .  ?        ?     ?     ?     ?  ?     
14  1  1  A  14  C    A   14  .  ?        ?     ?     ?     ?  ?     
15  1  1  A  15  C    A   15  .  ?        ?     ?     ?     ?  ?     
16  1  1  A  16  G    A   16  .  ?        ?     ?     ?     ?  ?     
17  1  1  A  17  U    A   17  .  ?        ?     ?     ?     ?  ?     
18  1  1  A  18  A    A   18  .  ?        ?     ?     ?     ?  ?     
19  1  1  A  19  G    A   19  .  ?        ?     ?     ?     ?  ?     
20  1  1  A  20  G    A   20  .  ?        ?     ?     ?     ?  ?     
21  1  1  A  21  U    A   21  .  ?        ?     ?     ?     ?  ?     
22  1  1  A  22  U    A   22  .  ?        ?     ?     ?     ?  ?     
23  1  1  A  23  G    A   23  .  ?        ?     ?     ?     ?  ?     
24  1  1  A  24  G    A   24  .  ?        ?     ?     ?     ?  ?     
25  1  1  A  25  G    A   25  .  ?        ?     ?     ?     ?  ?     
26  1  1  A  26  C    A   26  .  ?        ?     ?     ?     ?  ?     
27  1  1  A  27  C    A   27  .  ?        ?     ?     ?     ?  ?     
28  1  1  A  28  G    A   28  .  ?        ?     ?     ?     ?  ?     
29  1  1  A  29  A    A   29  .  ?        ?     ?     ?     ?  ?     
30  1  1  A  30  A    A   30  .  ?        ?     ?     ?     ?  ?     
31  1  1  A  31  A    A   31  .  ?        ?     ?     ?     ?  ?     
32  1  1  A  32  G    A   32  .  ?        ?     ?     ?     ?  ?     
33  1  1  A  33  G    A   33  .  ?        ?     ?     ?     ?  ?     
34  1  1  A  34  C    A   34  .  ?        ?     ?     ?     ?  ?     
35  1  1  A  35  A    A   35  .  ?        ?     ?     ?     ?  ?     
36  1  1  A  36  G    A   36  .  ?        ?     ?     ?     ?  ?     
37  1  1  A  37  C    A   37  .  ?        ?     ?     ?     ?  ?     
38  1  1  A  38  G    A   38  .  ?        ?     ?     ?     ?  ?     
39  1  1  A  39  A    A   39  .  ?        ?     ?     ?     ?  ?     
40  1  1  A  40  A    A   40  .  ?        ?     ?     ?     ?  ?     
41  1  1  A  41  U    A   41  .  ?        ?     ?     ?     ?  ?     
42  1  1  A  42  C    A   42  .  ?        ?     ?     ?     ?  ?     
43  1  1  A  43  U    A   43  .  ?        ?     ?     ?     ?  ?     
44  1  1  A  44  A    A   44  .  ?        ?     ?     ?     ?  ?     
45  1  1  A  45  C    A   45  .  ?        ?     ?     ?     ?  ?     
46  1  1  A  46  U    A   46  .  ?        ?     ?     ?     ?  ?     
47  1  1  A  47  G    A   47  .  ?        ?     ?     ?     ?  ?     
48  1  1  A  48  G    A   48  .  ?        ?     ?     ?     ?  ?     
49  1  1  A  49  A    A   49  .  ?        ?     ?     ?     ?  ?     
50  1  1  A  50  G    A   50  .  ?        ?     ?     ?     ?  ?     
51  1  1  A  51  C    A   51  .  ?        ?     ?     ?     ?  ?     
52  1  1  A  52  C    A   52  .  ?        ?     ?     ?     ?  ?     
53  1  2  B   .  MG   A  101  .  ?        ?     ?     ?     ?  ?     
54  1  2  C   .  MG   A  102  .  ?        ?     ?     ?     ?  ?     
55  1  2  D   .  MG   A  103  .  ?        ?     ?     ?     ?  ?     
56  1  2  E   .  MG   A  104  .  ?        ?     ?     ?     ?  ?     
57  1  2  F   .  MG   A  105  .  ?        ?     ?     ?     ?  ?     
58  1  2  G   .  MG   A  106  .  ?        ?     ?     ?     ?  ?     
59  1  3  H   .  NA   A  107  .  ?        ?     ?     ?     ?  ?     
60  1  3  I   .  NA   A  108  .  ?        ?     ?     ?     ?  ?     
61  1  3  J   .  NA   A  109  .  ?        ?     ?     ?     ?  ?     
62  1  3  K   .  NA   A  110  .  ?        ?     ?     ?     ?  ?     
63  1  3  L   .  NA   A  111  .  ?        ?     ?     ?     ?  ?     
64  1  4  M   .  PPS  A  112  .  ?        ?     9     8     6  Y     
65  1  5  N   .  HOH  A  201  .  ?        1     ?     ?     ?  ?     
66  1  5  N   .  HOH  A  202  .  ?        ?     ?     ?     ?  ?     
67  1  5  N   .  HOH  A  203  .  ?        ?     ?     ?     ?  ?     
68  1  5  N   .  HOH  A  204  .  ?        ?     ?     ?     ?  ?     
69  1  5  N   .  HOH  A  205  .  ?        ?     ?     ?     ?  ?     
70  1  5  N   .  HOH  A  206  .  ?        ?     ?     ?     ?  ?     
71  1  5  N   .  HOH  A  207  .  ?        ?     ?     ?     ?  ?     
72  1  5  N   .  HOH  A  208  .  ?        ?     ?     ?     ?  ?     
73  1  5  N   .  HOH  A  209  .  ?        ?     ?     ?     ?  ?     
74  1  5  N   .  HOH  A  210  .  ?        ?     ?     ?     ?  ?     
75  1  5  N   .  HOH  A  211  .  ?        ?     ?     ?     ?  ?     
76  1  5  N   .  HOH  A  212  .  ?        ?     ?     ?     ?  ?     
77  1  5  N   .  HOH  A  213  .  ?        ?     ?     ?     ?  ?     
78  1  5  N   .  HOH  A  214  .  ?        ?     ?     ?     ?  ?     
79  1  5  N   .  HOH  A  215  .  ?        ?     ?     ?     ?  ?     
80  1  5  N   .  HOH  A  216  .  ?        ?     ?     ?     ?  ?     
81  1  5  N   .  HOH  A  217  .  ?        ?     ?     ?     ?  ?     
82  1  5  N   .  HOH  A  218  .  ?        ?     ?     ?     ?  ?     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.RNA_score
_pdbx_vrpt_model_instance_geometry.RNA_suite
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1  0.00  NotAvailable    12  127.670    23  0.31    37  0.60  molprobity  1.000  
 2   2  0.96  Rotameric       11  115.870    26  0.42    41  1.17  molprobity  1.000  
 3   3  0.86  Rotameric       11  107.620    22  0.24    34  0.88  molprobity  1.000  
 4   4  0.88  Rotameric       10   99.560    22  0.38    34  0.61  molprobity  1.000  
 5   5  0.98  Rotameric       10   93.990    22  0.29    34  0.70  molprobity  1.000  
 6   6  0.05  Rotameric       11   85.010    22  0.57    34  1.02  molprobity  1.000  
 7   7  0.75  Rotameric       11   74.050    25  0.48    39  1.09  molprobity  1.000  
 8   8  0.33  Rotameric       11   78.300    25  0.45    39  0.95  molprobity  1.000  
 9   9  0.38  Rotameric       11   78.790    22  0.25    34  0.89  molprobity  1.000  
10  10  0.09  Rotameric       11   67.740    25  0.72    39  1.10  molprobity  1.000  
11  11  0.00  NonRotameric    11   72.680    25  0.47    39  0.81  molprobity  1.000  
12  12  0.59  Rotameric       11   74.520    22  0.32    34  1.10  molprobity  1.000  
13  13  0.88  Rotameric       11   73.120    22  0.34    34  0.81  molprobity  1.000  
14  14  0.83  Rotameric       11   67.540    22  0.51    34  0.92  molprobity  1.000  
15  15  0.85  Rotameric       11   64.660    22  0.45    34  1.34  molprobity  1.000  
16  16  0.74  Rotameric       11   73.440    26  0.38    41  0.67  molprobity  1.000  
17  17  0.59  Rotameric       10   73.980    22  0.40    34  0.85  molprobity  1.000  
18  18  0.85  Rotameric       11   81.340    25  0.45    39  0.86  molprobity  1.000  
19  19  0.78  Rotameric       11   90.390    26  0.31    41  0.76  molprobity  1.000  
20  20  0.82  Rotameric       11   90.930    26  0.57    41  1.23  molprobity  1.000  
21  21  0.62  Rotameric       10   91.480    22  0.35    34  0.72  molprobity  1.000  
22  22  0.92  Rotameric       10   82.520    22  0.44    34  1.07  molprobity  1.000  
23  23  0.71  Rotameric       11   81.920    26  0.51    41  1.13  molprobity  1.000  
24  24  0.77  Rotameric       11   83.070    26  0.56    41  0.84  molprobity  1.000  
25  25  0.74  Rotameric       11   79.010    26  0.35    41  0.71  molprobity  1.000  
26  26  0.96  Rotameric       11   83.760    22  0.37    34  0.51  molprobity  1.000  
27  27  0.91  Rotameric       11   83.940    22  0.36    34  0.65  molprobity  1.000  
28  28  0.93  Rotameric       11   83.300    26  0.41    41  0.87  molprobity  1.000  
29  29  0.51  Rotameric       11   85.030    25  0.48    39  0.69  molprobity  1.000  
30  30  0.61  Rotameric       11   87.610    25  0.25    39  0.64  molprobity  1.000  
31  31  0.79  Rotameric       11   92.590    25  0.46    39  0.84  molprobity  1.000  
32  32  0.00  NonRotameric    11  101.230    26  0.53    41  1.25  molprobity  1.000  
33  33  0.37  Rotameric       11   95.320    26  0.33    41  0.68  molprobity  1.000  
34  34  0.89  Rotameric       11   93.860    22  0.32    34  0.58  molprobity  1.000  
35  35  0.89  Rotameric       11   95.000    25  0.44    39  0.85  molprobity  1.000  
36  36  0.00  NonRotameric    11   75.220    26  0.50    41  0.88  molprobity  1.000  
37  37  0.55  Rotameric       11   78.070    22  0.32    34  0.63  molprobity  1.000  
38  38  0.49  Rotameric       11   70.510    26  0.41    41  0.60  molprobity  1.000  
39  39  0.84  Rotameric       11   82.560    25  0.46    39  0.57  molprobity  1.000  
40  40  0.91  Rotameric       11   83.920    25  0.48    39  0.59  molprobity  1.000  
41  41  0.77  Rotameric       10   78.460    22  0.43    34  0.92  molprobity  1.000  
42  42  0.79  Rotameric       11   84.050    22  0.43    34  0.68  molprobity  1.000  
43  43  0.64  Rotameric       10   90.210    22  0.32    34  0.70  molprobity  1.000  
44  44  0.91  Rotameric       11   88.170    25  0.50    39  0.80  molprobity  1.000  
45  45  0.59  Rotameric       11   88.610    22  0.41    34  0.88  molprobity  1.000  
46  46  0.36  Rotameric       10   87.630    22  0.52    34  0.94  molprobity  1.000  
47  47  0.83  Rotameric       11   86.840    26  0.55    41  1.18  molprobity  1.000  
48  48  0.72  Rotameric       11   92.640    26  0.40    41  0.72  molprobity  1.000  
49  49  0.49  Rotameric       11   97.140    25  0.45    39  0.76  molprobity  1.000  
50  50  0.22  Rotameric       11  111.920    26  0.48    41  1.18  molprobity  1.000  
51  51  0.60  Rotameric       11  119.520    22  0.34    34  0.86  molprobity  1.000  
52  52  0.80  Rotameric       12  126.590    21  0.21    30  0.62  molprobity  1.000  
53  53     ?  ?                ?   58.460     ?     ?     ?     ?  ?           1.000  
54  54     ?  ?                ?   65.610     ?     ?     ?     ?  ?           1.000  
55  55     ?  ?                ?   81.910     ?     ?     ?     ?  ?           1.000  
56  56     ?  ?                ?   80.020     ?     ?     ?     ?  ?           1.000  
57  57     ?  ?                ?   79.660     ?     ?     ?     ?  ?           1.000  
58  58     ?  ?                ?   69.340     ?     ?     ?     ?  ?           1.000  
59  59     ?  ?                ?   72.910     ?     ?     ?     ?  ?           1.000  
60  60     ?  ?                ?   95.230     ?     ?     ?     ?  ?           1.000  
61  61     ?  ?                ?   99.280     ?     ?     ?     ?  ?           1.000  
62  62     ?  ?                ?   77.940     ?     ?     ?     ?  ?           1.000  
63  63     ?  ?                ?  101.060     ?     ?     ?     ?  ?           1.000  
64  64     ?  ?               12   95.740    29  3.65    36  3.47  mogul       1.000  
65  65     ?  ?                ?   53.310     ?     ?     ?     ?  ?           1.000  
66  66     ?  ?                ?   74.780     ?     ?     ?     ?  ?           1.000  
67  67     ?  ?                ?   72.570     ?     ?     ?     ?  ?           1.000  
68  68     ?  ?                ?   61.440     ?     ?     ?     ?  ?           1.000  
69  69     ?  ?                ?   87.690     ?     ?     ?     ?  ?           1.000  
70  70     ?  ?                ?   59.690     ?     ?     ?     ?  ?           1.000  
71  71     ?  ?                ?   66.050     ?     ?     ?     ?  ?           1.000  
72  72     ?  ?                ?   74.490     ?     ?     ?     ?  ?           1.000  
73  73     ?  ?                ?   64.880     ?     ?     ?     ?  ?           1.000  
74  74     ?  ?                ?   58.520     ?     ?     ?     ?  ?           1.000  
75  75     ?  ?                ?   65.010     ?     ?     ?     ?  ?           1.000  
76  76     ?  ?                ?   78.180     ?     ?     ?     ?  ?           1.000  
77  77     ?  ?                ?   68.910     ?     ?     ?     ?  ?           1.000  
78  78     ?  ?                ?   89.240     ?     ?     ?     ?  ?           1.000  
79  79     ?  ?                ?   75.240     ?     ?     ?     ?  ?           1.000  
80  80     ?  ?                ?   74.520     ?     ?     ?     ?  ?           1.000  
81  81     ?  ?                ?   80.480     ?     ?     ?     ?  ?           1.000  
82  82     ?  ?                ?   89.270     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_symm_clashes.ordinal
_pdbx_vrpt_instance_symm_clashes.instance_id
_pdbx_vrpt_instance_symm_clashes.label_atom_id
_pdbx_vrpt_instance_symm_clashes.scid
_pdbx_vrpt_instance_symm_clashes.symop
_pdbx_vrpt_instance_symm_clashes.clashmag
_pdbx_vrpt_instance_symm_clashes.dist
1  11  OP2  0  1_555  0.05  2.15  
2  65  O    0  2_655  0.05  2.15  
#
loop_
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2
_pdbx_vrpt_instance_mogul_bond_outliers.obsval
_pdbx_vrpt_instance_mogul_bond_outliers.mean
_pdbx_vrpt_instance_mogul_bond_outliers.numobs
_pdbx_vrpt_instance_mogul_bond_outliers.stdev
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff
1  64  P2     O6P    1.65  1.59     24  0.03   2.46  0.05  
2  64  "O4'"  "C4'"  1.29  1.45   4787  0.02  -6.97  0.01  
3  64  "O4'"  "C1'"  1.61  1.40     25  0.01  15.98  0.18  
4  64  "C1'"  N9     1.44  1.49     24  0.02  -2.02  0.00  
5  64  C2     N3     1.38  1.32    279  0.02   3.90  0.00  
6  64  C6     N6     1.44  1.34    164  0.04   2.97  0.02  
7  64  "O2'"  "C2'"  1.51  1.43  11316  0.02   3.28  0.00  
8  64  "O3'"  "C3'"  1.36  1.44    361  0.03  -2.22  0.00  
9  64  P1     "O3'"  1.66  1.59     34  0.02   4.23  0.04  
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  64  OS1    S2     O6P    110.66  106.02   20  2.14   2.17   0.16  
2  64  "C4'"  "O4'"  "C1'"  101.17  109.92   23  0.92  -9.56   6.23  
3  64  "O4'"  "C1'"  N9     111.95  108.75   24  1.33   2.42   0.70  
4  64  "C1'"  N9     C4     154.67  126.64   30  1.76  15.95  24.02  
5  64  N3     C2     N1     120.42  128.67  216  1.36  -6.08   4.75  
6  64  "C3'"  "C2'"  "C1'"  105.27   99.89  273  2.20   2.45   0.21  
7  64  "C2'"  "C3'"  "C4'"   99.48  103.24  307  1.75  -2.15   0.00  
8  64  P1     "O3'"  "C3'"  118.07  123.43   28  2.67  -2.01   0.91  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
1  64  "C5'"  "O5'"  P2     O6P       4.03  79.97   40  44.20  15.09  0.00  
2  64  "C5'"  "O5'"  P2     O4P    -115.00  60.75   40  13.30  14.29  0.00  
3  64  "C5'"  "O5'"  P2     O5P     122.68  56.29   40  16.11  14.77  0.00  
4  64  "O4'"  "C4'"  "C5'"  "O5'"   131.71  64.16  522  11.09   6.44  0.19  
5  64  "C3'"  "C4'"  "C5'"  "O5'"  -113.66  58.85  522   9.80   3.96  0.19  
6  64  "C3'"  "O3'"  P1     O2P      39.05  63.70   68  42.45   1.15  4.41  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  20  0.935  0.125  -0.922  
 2   2  23  0.945  0.129  -0.840  
 3   3  20  0.954  0.150  -0.416  
 4   4  20  0.959  0.131  -0.688  
 5   5  20  0.928  0.133  -0.655  
 6   6  20  0.943  0.139  -0.621  
 7   7  22  0.976  0.145  -0.531  
 8   8  22  0.975  0.135  -0.722  
 9   9  20  0.969  0.135  -0.696  
10  10  22  0.972  0.127  -0.874  
11  11  22  0.955  0.165  -0.150  
12  12  20  0.963  0.122  -0.938  
13  13  20  0.981  0.140  -0.603  
14  14  20  0.977  0.147  -0.472  
15  15  20  0.979  0.161  -0.211  
16  16  23  0.975  0.160  -0.207  
17  17  20  0.980  0.142  -0.505  
18  18  22  0.972  0.154  -0.360  
19  19  23  0.957  0.130  -0.820  
20  20  23  0.964  0.121  -1.004  
21  21  20  0.964  0.129  -0.722  
22  22  20  0.963  0.138  -0.572  
23  23  23  0.968  0.148  -0.452  
24  24  23  0.949  0.109  -1.249  
25  25  23  0.968  0.113  -1.168  
26  26  20  0.968  0.132  -0.752  
27  27  20  0.965  0.119  -0.994  
28  28  23  0.974  0.119  -1.045  
29  29  22  0.971  0.136  -0.703  
30  30  22  0.974  0.144  -0.550  
31  31  22  0.951  0.129  -0.836  
32  32  23  0.938  0.098  -1.474  
33  33  23  0.943  0.111  -1.209  
34  34  20  0.910  0.129  -0.808  
35  35  22  0.938  0.128  -0.855  
36  36  23  0.956  0.157  -0.268  
37  37  20  0.966  0.146  -0.491  
38  38  23  0.974  0.117  -1.086  
39  39  22  0.974  0.131  -0.798  
40  40  22  0.980  0.151  -0.417  
41  41  20  0.969  0.153  -0.322  
42  42  20  0.973  0.136  -0.677  
43  43  20  0.964  0.147  -0.422  
44  44  22  0.968  0.132  -0.779  
45  45  20  0.966  0.132  -0.752  
46  46  20  0.954  0.138  -0.572  
47  47  23  0.972  0.120  -1.025  
48  48  23  0.966  0.126  -0.902  
49  49  22  0.944  0.133  -0.760  
50  50  23  0.927  0.119  -1.045  
51  51  20  0.921  0.117  -1.032  
52  52  20  0.916  0.127  -0.845  
53  53   1  0.975  0.049       ?  
54  54   1  0.931  0.161       ?  
55  55   1  0.979  0.069       ?  
56  56   1  0.943  0.127       ?  
57  57   1  0.897  0.131       ?  
58  58   1  0.905  0.053       ?  
59  59   1  0.790  0.168       ?  
60  60   1  0.908  0.547       ?  
61  61   1  0.736  0.346       ?  
62  62   1  0.969  0.131       ?  
63  63   1  0.924  0.076       ?  
64  64  31  0.943  0.118       ?  
65  65   1  0.927  0.175       ?  
66  66   1  0.953  0.172       ?  
67  67   1  0.937  0.208       ?  
68  68   1  0.974  0.056       ?  
69  69   1  0.987  0.722       ?  
70  70   1  0.936  0.209       ?  
71  71   1  0.994  0.238       ?  
72  72   1  0.974  0.192       ?  
73  73   1  0.959  0.226       ?  
74  74   1  0.991  0.148       ?  
75  75   1  0.942  0.340       ?  
76  76   1  0.979  0.287       ?  
77  77   1  0.794  0.204       ?  
78  78   1  0.398  0.439       ?  
79  79   1  0.967  0.242       ?  
80  80   1  0.950  0.419       ?  
81  81   1  0.954  0.149       ?  
82  82   1  0.982  0.343       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "2022.3.0, CSD as543be (2022)"                                        Y  
3  eds          2.37.1                                                                Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.20.1                                                                Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
