data_6TB7

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  6TB7
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    6TB7
_pdbx_vrpt_summary.PDB_deposition_date         2019-11-01
_pdbx_vrpt_summary.PDB_revision_number         2
_pdbx_vrpt_summary.PDB_revision_date           2024-05-15
_pdbx_vrpt_summary.RNA_suiteness               0.54
_pdbx_vrpt_summary.report_creation_date        2024-06-24:20:47
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,buster-report,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   Y
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      RNA  
2  non-polymer  "ADENOSINE MONOPHOSPHATE"  
3  non-polymer  "MAGNESIUM ION"  
4  non-polymer  "SODIUM ION"  
5  non-polymer  "BROMIDE ION"  
6  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  3  
D  3  
E  3  
F  3  
G  3  
H  3  
I  3  
J  4  
K  4  
L  4  
M  4  
N  5  
O  6  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  2.53  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore    
2  RSRZ_outliers_percent  
3  R_value_R_free         
4  RNAsuiteness_percent   
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1   32.62  141614     ?     ?  
2  2  1   49.95    6463  2.50  2.54  
3  1  2  100.00  127900     ?     ?  
4  2  2  100.00    5630  2.50  2.54  
5  1  3   36.52  130704     ?     ?  
6  2  3   61.46    5743  2.50  2.54  
7  1  4   50.64    3102     ?     ?  
8  2  4   43.53    1020  2.18  2.86  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      1.32
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.73
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   1243
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  1937
#
_pdbx_vrpt_summary_geometry.ordinal          1
_pdbx_vrpt_summary_geometry.clashscore       8.70
_pdbx_vrpt_summary_geometry.num_H_reduce     578
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ   1243
_pdbx_vrpt_summary_geometry.bonds_RMSZ       0.73
_pdbx_vrpt_summary_geometry.num_angles_RMSZ  1937
_pdbx_vrpt_summary_geometry.angles_RMSZ      1.32
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 115.465
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            40.137
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         69.950
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.41(2.54A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        11118
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.430
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.222
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.489
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.325
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.965
_pdbx_vrpt_summary_diffraction.twin_fraction             -k,-h,-l:0.021
_pdbx_vrpt_summary_diffraction.DCC_R                     0.21
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.25
_pdbx_vrpt_summary_diffraction.EDS_R                     0.21
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.53
_pdbx_vrpt_summary_diffraction.EDS_res_low               47.59
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[67.794,100.817,46.666,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.755
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 13.04% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         0
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         98.36
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      629
_pdbx_vrpt_summary_diffraction.percent_free_reflections  5.66
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.53
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        47.59
_pdbx_vrpt_summary_diffraction.PDB_R                     0.21
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.24
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
_pdbx_vrpt_model_instance.ligand_of_interest
 1  1  1  A   1  G    A    1  .  ?        ?     2     ?     ?     ?  ?     
 2  1  1  A   2  G    A    2  .  ?        ?     ?     ?     ?     ?  ?     
 3  1  1  A   3  C    A    3  .  ?        ?     2     ?     ?     ?  ?     
 4  1  1  A   4  U    A    4  .  ?        ?     4     ?     ?     ?  ?     
 5  1  1  A   5  U    A    5  .  ?        ?     2     ?     ?     ?  ?     
 6  1  1  A   6  C    A    6  .  ?        1     ?     ?     ?     ?  ?     
 7  1  1  A   7  A    A    7  .  ?        ?     1     ?     ?     ?  ?     
 8  1  1  A   8  A    A    8  .  ?        ?     ?     ?     ?     ?  ?     
 9  1  1  A   9  C    A    9  .  ?        ?     1     ?     ?     ?  ?     
10  1  1  A  10  A    A   10  .  ?        ?     1     ?     ?     ?  ?     
11  1  1  A  11  A    A   11  .  ?        ?     ?     ?     ?     ?  ?     
12  1  1  A  12  C    A   12  .  ?        ?     ?     ?     ?     ?  ?     
13  1  1  A  13  C    A   13  .  ?        1     ?     ?     ?     ?  ?     
14  1  1  A  14  C    A   14  .  ?        ?     ?     ?     ?     ?  ?     
15  1  1  A  15  C    A   15  .  ?        2     ?     ?     ?     ?  ?     
16  1  1  A  16  G    A   16  .  ?        ?     ?     ?     ?     ?  ?     
17  1  1  A  17  U    A   17  .  ?        ?     ?     ?     ?     ?  ?     
18  1  1  A  18  A    A   18  .  ?        ?     ?     ?     ?     ?  ?     
19  1  1  A  19  G    A   19  .  ?        ?     ?     ?     ?     ?  ?     
20  1  1  A  20  G    A   20  .  ?        1     ?     ?     ?     ?  ?     
21  1  1  A  21  U    A   21  .  ?        ?     1     ?     ?     ?  ?     
22  1  1  A  22  U    A   22  .  ?        ?     1     ?     ?     ?  ?     
23  1  1  A  23  G    A   23  .  ?        ?     ?     ?     ?     ?  ?     
24  1  1  A  24  G    A   24  .  ?        ?     ?     ?     ?     ?  ?     
25  1  1  A  25  G    A   25  .  ?        ?     ?     ?     ?     ?  ?     
26  1  1  A  26  C    A   26  .  ?        ?     ?     ?     ?     ?  ?     
27  1  1  A  27  C    A   27  .  ?        ?     ?     ?     ?     ?  ?     
28  1  1  A  28  G    A   28  .  ?        ?     ?     ?     ?     ?  ?     
29  1  1  A  29  A    A   29  .  ?        ?     ?     ?     ?     ?  ?     
30  1  1  A  30  A    A   30  .  ?        ?     1     ?     ?     ?  ?     
31  1  1  A  31  A    A   31  .  ?        ?     2     ?     ?     ?  ?     
32  1  1  A  32  G    A   32  .  ?        ?     1     ?     ?     ?  ?     
33  1  1  A  33  G    A   33  .  ?        ?     ?     ?     ?     ?  ?     
34  1  1  A  34  C    A   34  .  ?        ?     2     ?     ?     ?  ?     
35  1  1  A  35  A    A   35  .  ?        ?     3     ?     ?     ?  ?     
36  1  1  A  36  G    A   36  .  ?        ?     ?     ?     ?     ?  ?     
37  1  1  A  37  C    A   37  .  ?        ?     1     ?     ?     ?  ?     
38  1  1  A  38  G    A   38  .  ?        ?     ?     ?     ?     ?  ?     
39  1  1  A  39  A    A   39  .  ?        ?     1     ?     ?     ?  ?     
40  1  1  A  40  A    A   40  .  ?        ?     1     ?     ?     ?  ?     
41  1  1  A  41  U    A   41  .  ?        ?     ?     ?     ?     ?  ?     
42  1  1  A  42  C    A   42  .  ?        1     ?     ?     ?     ?  ?     
43  1  1  A  43  U    A   43  .  ?        ?     ?     ?     ?     ?  ?     
44  1  1  A  44  A    A   44  .  ?        ?     ?     ?     ?     ?  ?     
45  1  1  A  45  C    A   45  .  ?        ?     1     ?     ?     ?  ?     
46  1  1  A  46  U    A   46  .  ?        ?     1     ?     ?     ?  ?     
47  1  1  A  47  G    A   47  .  ?        ?     ?     ?     ?     ?  ?     
48  1  1  A  48  G    A   48  .  ?        ?     ?     ?     ?     ?  ?     
49  1  1  A  49  A    A   49  .  ?        1     ?     ?     ?     ?  ?     
50  1  1  A  50  G    A   50  .  ?        ?     ?     ?     ?     ?  ?     
51  1  1  A  51  C    A   51  .  ?        ?     ?     ?     ?     ?  ?     
52  1  1  A  52  C    A   52  .  ?        ?     ?     ?     ?     ?  ?     
53  1  2  B   .  AMP  A  101  .  ?        ?     ?     1     3     1  Y     
54  1  3  C   .  MG   A  102  .  ?        ?     ?     ?     ?     ?  ?     
55  1  3  D   .  MG   A  103  .  ?        ?     ?     ?     ?     ?  ?     
56  1  3  E   .  MG   A  104  .  ?        ?     ?     ?     ?     ?  ?     
57  1  3  F   .  MG   A  105  .  ?        ?     ?     ?     ?     ?  ?     
58  1  3  G   .  MG   A  106  .  ?        ?     ?     ?     ?     ?  ?     
59  1  3  H   .  MG   A  107  .  ?        ?     ?     ?     ?     ?  ?     
60  1  3  I   .  MG   A  108  .  ?        ?     ?     ?     ?     ?  ?     
61  1  4  J   .  NA   A  109  .  ?        ?     ?     ?     ?     ?  ?     
62  1  4  K   .  NA   A  110  .  ?        ?     ?     ?     ?     ?  ?     
63  1  4  L   .  NA   A  111  .  ?        ?     ?     ?     ?     ?  ?     
64  1  4  M   .  NA   A  112  .  ?        ?     ?     ?     ?     ?  ?     
65  1  5  N   .  BR   A  113  .  ?        ?     ?     ?     ?     ?  ?     
66  1  6  O   .  HOH  A  201  .  ?        ?     1     ?     ?     ?  ?     
67  1  6  O   .  HOH  A  202  .  ?        ?     ?     ?     ?     ?  ?     
68  1  6  O   .  HOH  A  203  .  ?        ?     ?     ?     ?     ?  ?     
69  1  6  O   .  HOH  A  204  .  ?        ?     ?     ?     ?     ?  ?     
70  1  6  O   .  HOH  A  205  .  ?        ?     ?     ?     ?     ?  ?     
71  1  6  O   .  HOH  A  206  .  ?        ?     ?     ?     ?     ?  ?     
72  1  6  O   .  HOH  A  207  .  ?        ?     ?     ?     ?     ?  ?     
73  1  6  O   .  HOH  A  208  .  ?        ?     ?     ?     ?     ?  ?     
74  1  6  O   .  HOH  A  209  .  ?        ?     ?     ?     ?     ?  ?     
75  1  6  O   .  HOH  A  210  .  ?        ?     ?     ?     ?     ?  ?     
76  1  6  O   .  HOH  A  211  .  ?        ?     ?     ?     ?     ?  ?     
77  1  6  O   .  HOH  A  212  .  ?        ?     ?     ?     ?     ?  ?     
78  1  6  O   .  HOH  A  213  .  ?        ?     ?     ?     ?     ?  ?     
79  1  6  O   .  HOH  A  214  .  ?        ?     ?     ?     ?     ?  ?     
80  1  6  O   .  HOH  A  215  .  ?        ?     ?     ?     ?     ?  ?     
81  1  6  O   .  HOH  A  216  .  ?        ?     ?     ?     ?     ?  ?     
82  1  6  O   .  HOH  A  217  .  ?        ?     ?     ?     ?     ?  ?     
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.RNA_score
_pdbx_vrpt_model_instance_geometry.RNA_suite
_pdbx_vrpt_model_instance_geometry.RNA_pucker
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
 1   1  0.00  NotAvailable       ?          12  113.060    23  0.60    37  0.72  molprobity  1.000  
 2   2  0.82  Rotameric          ?          11  103.920    26  0.51    41  1.04  molprobity  1.000  
 3   3  0.70  Rotameric          ?          11  106.440    22  0.97    34  1.10  molprobity  1.000  
 4   4  0.20  Rotameric          ?          10   93.020    22  0.42    34  0.86  molprobity  1.000  
 5   5  0.82  Rotameric          ?          10   83.900    22  0.46    34  1.35  molprobity  1.000  
 6   6  0.00  NonRotameric       ?          11   78.320    22  0.66    34  1.66  molprobity  1.000  
 7   7  0.84  Rotameric          ?          11   72.290    25  1.13    39  1.67  molprobity  1.000  
 8   8  0.31  Rotameric          ?          11   74.790    25  1.02    39  1.49  molprobity  1.000  
 9   9  0.52  Rotameric          ?          11   77.680    22  0.59    34  1.40  molprobity  1.000  
10  10  0.01  Rotameric          ?          11   68.650    25  0.82    39  0.97  molprobity  1.000  
11  11  0.00  NonRotameric       ?          11   69.760    25  0.68    39  1.14  molprobity  1.000  
12  12  0.38  Rotameric          ?          11   69.630    22  0.66    34  1.52  molprobity  1.000  
13  13  0.87  Rotameric          ?          11   70.620    22  0.56    34  1.67  molprobity  1.000  
14  14  0.89  Rotameric          ?          11   66.110    22  0.80    34  1.67  molprobity  1.000  
15  15  0.72  Rotameric          ?          11   64.050    22  0.46    34  2.13  molprobity  1.000  
16  16  0.42  Rotameric          ?          11   68.450    26  0.80    41  1.07  molprobity  1.000  
17  17  0.47  Rotameric          ?          10   72.710    22  0.63    34  1.19  molprobity  1.000  
18  18  0.78  Rotameric          ?          11   77.230    25  0.77    39  1.37  molprobity  1.000  
19  19  0.66  Rotameric          ?          11   85.730    26  0.59    41  0.98  molprobity  1.000  
20  20  0.81  Rotameric          ?          11   89.000    26  0.65    41  1.51  molprobity  1.000  
21  21  0.46  Rotameric          ?          10   84.260    22  0.66    34  1.18  molprobity  1.000  
22  22  0.59  Rotameric          ?          10   79.140    22  0.79    34  1.18  molprobity  1.000  
23  23  0.52  Rotameric          ?          11   79.480    26  0.53    41  1.24  molprobity  1.000  
24  24  0.02  Rotameric          ?          11   80.940    26  0.98    41  1.36  molprobity  1.000  
25  25  0.35  Rotameric          ?          11   80.500    26  0.46    41  1.01  molprobity  1.000  
26  26  0.98  Rotameric          ?          11   83.540    22  0.64    34  1.04  molprobity  1.000  
27  27  0.75  Rotameric          ?          11   80.430    22  0.61    34  1.25  molprobity  1.000  
28  28  0.92  Rotameric          ?          11   84.670    26  0.64    41  1.32  molprobity  1.000  
29  29  0.66  Rotameric          ?          11   84.700    25  0.94    39  1.30  molprobity  1.000  
30  30  0.83  Rotameric          ?          11   90.000    25  0.80    39  0.79  molprobity  1.000  
31  31  0.33  Rotameric          ?          11   91.870    25  0.59    39  1.10  molprobity  1.000  
32  32  0.00  Triaged/NotBinned  ?          11   99.180    26  0.52    41  1.03  molprobity  1.000  
33  33  0.33  Rotameric          ?          11   97.280    26  0.52    41  1.00  molprobity  1.000  
34  34  0.53  Rotameric          ?          11   99.380    22  0.47    34  1.01  molprobity  1.000  
35  35  0.00  Triaged/NotBinned  outlier    11  100.680    25  0.79    39  1.73  molprobity  1.000  
36  36  0.00  NonRotameric       ?          11   75.550    26  0.97    41  1.53  molprobity  1.000  
37  37  0.43  Rotameric          ?          11   76.680    22  0.57    34  1.46  molprobity  1.000  
38  38  0.48  Rotameric          ?          11   68.490    26  0.78    41  1.63  molprobity  1.000  
39  39  0.65  Rotameric          ?          11   78.720    25  0.55    39  0.85  molprobity  1.000  
40  40  0.70  Rotameric          ?          11   80.860    25  1.04    39  1.15  molprobity  1.000  
41  41  0.66  Rotameric          ?          10   80.830    22  0.56    34  1.09  molprobity  1.000  
42  42  0.48  Rotameric          ?          11   76.780    22  0.86    34  1.54  molprobity  1.000  
43  43  0.09  Rotameric          ?          10   88.550    22  0.52    34  0.91  molprobity  1.000  
44  44  0.91  Rotameric          ?          11   81.940    25  0.76    39  1.18  molprobity  1.000  
45  45  0.79  Rotameric          ?          11   80.640    22  0.81    34  1.39  molprobity  1.000  
46  46  0.11  Rotameric          ?          10   80.060    22  1.13    34  1.48  molprobity  1.000  
47  47  0.57  Rotameric          ?          11   83.340    26  0.78    41  1.55  molprobity  1.000  
48  48  0.71  Rotameric          ?          11   86.330    26  0.66    41  1.46  molprobity  1.000  
49  49  0.55  Rotameric          ?          11   90.790    25  1.26    39  2.05  molprobity  1.000  
50  50  0.34  Rotameric          ?          11  103.050    26  0.63    41  1.28  molprobity  1.000  
51  51  0.79  Rotameric          ?          11  104.940    22  0.45    34  1.21  molprobity  1.000  
52  52  0.86  Rotameric          ?          12  109.660    21  0.43    30  0.80  molprobity  1.000  
53  53     ?  ?                  ?          12   98.800    21  0.79    23  1.28  mogul       1.000  
54  54     ?  ?                  ?           ?   63.360     ?     ?     ?     ?  ?           1.000  
55  55     ?  ?                  ?           ?   73.220     ?     ?     ?     ?  ?           1.000  
56  56     ?  ?                  ?           ?   51.820     ?     ?     ?     ?  ?           1.000  
57  57     ?  ?                  ?           ?   74.410     ?     ?     ?     ?  ?           1.000  
58  58     ?  ?                  ?           ?   84.100     ?     ?     ?     ?  ?           1.000  
59  59     ?  ?                  ?           ?   89.020     ?     ?     ?     ?  ?           1.000  
60  60     ?  ?                  ?           ?  107.890     ?     ?     ?     ?  ?           1.000  
61  61     ?  ?                  ?           ?   78.010     ?     ?     ?     ?  ?           1.000  
62  62     ?  ?                  ?           ?  104.880     ?     ?     ?     ?  ?           1.000  
63  63     ?  ?                  ?           ?  119.870     ?     ?     ?     ?  ?           1.000  
64  64     ?  ?                  ?           ?  134.590     ?     ?     ?     ?  ?           1.000  
65  65     ?  ?                  ?           ?  167.240     ?     ?     ?     ?  ?           1.000  
66  66     ?  ?                  ?           ?   62.950     ?     ?     ?     ?  ?           1.000  
67  67     ?  ?                  ?           ?   75.800     ?     ?     ?     ?  ?           1.000  
68  68     ?  ?                  ?           ?   76.150     ?     ?     ?     ?  ?           1.000  
69  69     ?  ?                  ?           ?   58.150     ?     ?     ?     ?  ?           1.000  
70  70     ?  ?                  ?           ?   69.020     ?     ?     ?     ?  ?           1.000  
71  71     ?  ?                  ?           ?   70.760     ?     ?     ?     ?  ?           1.000  
72  72     ?  ?                  ?           ?   60.540     ?     ?     ?     ?  ?           1.000  
73  73     ?  ?                  ?           ?   63.680     ?     ?     ?     ?  ?           1.000  
74  74     ?  ?                  ?           ?   56.020     ?     ?     ?     ?  ?           1.000  
75  75     ?  ?                  ?           ?   72.960     ?     ?     ?     ?  ?           1.000  
76  76     ?  ?                  ?           ?   58.880     ?     ?     ?     ?  ?           1.000  
77  77     ?  ?                  ?           ?   66.650     ?     ?     ?     ?  ?           1.000  
78  78     ?  ?                  ?           ?   66.220     ?     ?     ?     ?  ?           1.000  
79  79     ?  ?                  ?           ?   73.790     ?     ?     ?     ?  ?           1.000  
80  80     ?  ?                  ?           ?   74.010     ?     ?     ?     ?  ?           1.000  
81  81     ?  ?                  ?           ?   66.340     ?     ?     ?     ?  ?           1.000  
82  82     ?  ?                  ?           ?   60.800     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   1  "HO5'"   1  0.45  1.64  
 2   1  H8       1  0.45  1.64  
 3   3  "O2'"    2  0.60  2.00  
 4   3  "C2'"    3  0.57  2.34  
 5   4  "H5'"    2  0.60  2.00  
 6   4  "H5'"    3  0.57  2.34  
 7   4  "O2'"    4  0.54  2.08  
 8   4  "H2'"    5  0.41  2.55  
 9   5  "H5'"    4  0.54  2.08  
10   5  C6       5  0.41  2.55  
11   7  OP1      6  0.74  2.06  
12   9  "H5''"   7  0.49  2.13  
13  10  OP2      7  0.49  2.13  
14  21  "O2'"    8  0.40  2.21  
15  22  "H5'"    8  0.40  2.21  
16  30  "H2'"    9  0.57  2.39  
17  31  C8       9  0.57  2.39  
18  31  C5      10  0.44  2.52  
19  32  "H1'"   10  0.44  2.52  
20  34  "H2'"   11  0.47  2.15  
21  34  "O2'"   12  0.46  2.14  
22  35  "O2'"   13  0.95  1.84  
23  35  "O4'"   11  0.47  2.15  
24  35  "H5'"   12  0.46  2.14  
25  37  OP2     13  0.95  1.84  
26  39  "H2'"   14  0.58  2.37  
27  40  C8      14  0.58  2.37  
28  45  "O2'"   15  0.49  2.12  
29  46  "H5'"   15  0.49  2.12  
30  66  O        6  0.74  2.06  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
1   6  C4  C5  C6  119.936  117.400  0.500   5.07  
2  13  C6  N1  C2  122.455  120.300  0.400   5.39  
3  15  C5  C6  N1  118.158  121.000  0.500  -5.68  
4  15  C6  N1  C2  122.601  120.300  0.400   5.75  
5  20  N1  C6  O6  123.073  119.900  0.600   5.29  
6  42  C6  N1  C2  122.376  120.300  0.400   5.19  
7  49  N1  C6  N6  122.414  118.600  0.600   6.36  
#
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal      1
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id  53
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1       C2
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2       N3
_pdbx_vrpt_instance_mogul_bond_outliers.obsval       1.35
_pdbx_vrpt_instance_mogul_bond_outliers.mean         1.32
_pdbx_vrpt_instance_mogul_bond_outliers.numobs       279
_pdbx_vrpt_instance_mogul_bond_outliers.stdev        0.02
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore       2.01
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff      0.00
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1  53  O3P  P   O2P  116.03  107.80  262  3.75   2.20  0.16  
2  53  C4   C5  N7   106.65  109.34   22  1.06  -2.54  0.87  
3  53  N3   C2  N1   123.38  128.67  216  1.36  -3.90  1.80  
#
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal        1
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id    53
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1         "C3'"
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2         "C4'"
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3         "C5'"
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4         "O5'"
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval         -161.99
_pdbx_vrpt_instance_mogul_torsion_outliers.mean           95.42
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs         522
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev          32.92
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff        0.19
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density  4.02
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
 1   1  20  0.948  0.138  -0.656  
 2   2  23  0.959  0.125  -0.922  
 3   3  20  0.946  0.162  -0.192  
 4   4  20  0.944  0.137  -0.588  
 5   5  20  0.932  0.134  -0.638  
 6   6  20  0.961  0.119  -0.994  
 7   7  22  0.968  0.147  -0.493  
 8   8  22  0.952  0.144  -0.550  
 9   9  20  0.952  0.146  -0.491  
10  10  22  0.965  0.129  -0.836  
11  11  22  0.968  0.163  -0.189  
12  12  20  0.961  0.125  -0.882  
13  13  20  0.963  0.131  -0.771  
14  14  20  0.972  0.139  -0.621  
15  15  20  0.976  0.160  -0.229  
16  16  23  0.972  0.160  -0.207  
17  17  20  0.974  0.131  -0.688  
18  18  22  0.975  0.135  -0.722  
19  19  23  0.949  0.132  -0.779  
20  20  23  0.963  0.121  -1.004  
21  21  20  0.977  0.117  -0.922  
22  22  20  0.964  0.128  -0.738  
23  23  23  0.960  0.155  -0.309  
24  24  23  0.951  0.118  -1.065  
25  25  23  0.961  0.109  -1.249  
26  26  20  0.969  0.124  -0.901  
27  27  20  0.967  0.114  -1.088  
28  28  23  0.962  0.114  -1.147  
29  29  22  0.972  0.119  -1.027  
30  30  22  0.953  0.152  -0.398  
31  31  22  0.925  0.143  -0.570  
32  32  23  0.934  0.100  -1.434  
33  33  23  0.932  0.109  -1.249  
34  34  20  0.909  0.129  -0.808  
35  35  22  0.905  0.134  -0.741  
36  36  23  0.954  0.146  -0.493  
37  37  20  0.960  0.122  -0.938  
38  38  23  0.970  0.105  -1.331  
39  39  22  0.972  0.132  -0.779  
40  40  22  0.969  0.136  -0.703  
41  41  20  0.954  0.158  -0.238  
42  42  20  0.975  0.137  -0.659  
43  43  20  0.956  0.156  -0.272  
44  44  22  0.963  0.133  -0.760  
45  45  20  0.964  0.123  -0.920  
46  46  20  0.962  0.130  -0.705  
47  47  23  0.960  0.125  -0.922  
48  48  23  0.967  0.135  -0.718  
49  49  22  0.955  0.109  -1.217  
50  50  23  0.948  0.128  -0.861  
51  51  20  0.936  0.112  -1.125  
52  52  20  0.959  0.105  -1.256  
53  53  23  0.937  0.140       ?  
54  54   1  0.958  0.067       ?  
55  55   1  0.832  0.064       ?  
56  56   1  0.973  0.034       ?  
57  57   1  0.962  0.103       ?  
58  58   1  0.922  0.544       ?  
59  59   1  0.762  0.218       ?  
60  60   1  0.795  0.489       ?  
61  61   1  0.861  0.131       ?  
62  62   1  0.650  0.444       ?  
63  63   1  0.480  0.839       ?  
64  64   1  0.743  1.589       ?  
65  65   1  0.876  0.152       ?  
66  66   1  0.725  0.146       ?  
67  67   1  0.968  0.506       ?  
68  68   1  0.945  0.464       ?  
69  69   1  0.982  0.038       ?  
70  70   1  0.906  0.148       ?  
71  71   1  0.879  0.325       ?  
72  72   1  0.900  0.326       ?  
73  73   1  0.933  0.122       ?  
74  74   1  0.927  0.393       ?  
75  75   1  0.968  0.191       ?  
76  76   1  0.990  0.121       ?  
77  77   1  0.947  0.226       ?  
78  78   1  0.980  0.075       ?  
79  79   1  0.975  0.224       ?  
80  80   1  0.905  1.505       ?  
81  81   1  0.874  0.281       ?  
82  82   1  0.959  0.223       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "2022.3.0, CSD as543be (2022)"                                        Y  
3  eds          2.37.1                                                                Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.20.1                                                                Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
