data_5A3E

_audit_conform.dict_name      mmcif_pdbx_vrpt.dic
_audit_conform.dict_version   0.068
_audit_conform.dict_location  https://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx_vrpt.dic
#
loop_
_pdbx_vrpt_database.id
_pdbx_vrpt_database.code
PDB   5A3E       
PDBE  EBI-63889  
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   "electron crystallography"
#
_pdbx_vrpt_summary.entry_id                    5A3E
_pdbx_vrpt_summary.PDB_deposition_date         2015-05-28
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2024-11-13
_pdbx_vrpt_summary.report_creation_date        2025-02-20:14:52
_pdbx_vrpt_summary.attempted_validation_steps  visualanalysis,molprobity,validation-pack,validation_schema,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer  "LYSOZYME C"  
2  water    water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  pdb  
2  all  "electron microscopy"  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore           
2  Ramachandran_outlier_percent  
3  rotamer_outliers_percent      
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1   26.44  210492  ?     ?     
2  2  1   29.52   15764  ?     ?     
3  1  2  100.00  207382  ?     ?     
4  2  2  100.00   16835  ?     ?     
5  1  3  100.00  206894  ?     ?     
6  2  3  100.00   16415  ?     ?     
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  5  3  A  1  1  A  100.00  
4  6  3  A  1  1  A  100.00  
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      0.41
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.23
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   1012
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  1368
#
_pdbx_vrpt_summary_entity_fit_to_map.ordinal                    1
_pdbx_vrpt_summary_entity_fit_to_map.PDB_model_num              1
_pdbx_vrpt_summary_entity_fit_to_map.entity_id                  1
_pdbx_vrpt_summary_entity_fit_to_map.label_asym_id              A
_pdbx_vrpt_summary_entity_fit_to_map.auth_asym_id               A
_pdbx_vrpt_summary_entity_fit_to_map.average_residue_inclusion  0.3304
_pdbx_vrpt_summary_entity_fit_to_map.Q_score                    0.309
#
_pdbx_vrpt_summary_geometry.ordinal                        1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers  0.00
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers       0.00
_pdbx_vrpt_summary_geometry.clashscore                     9.79
_pdbx_vrpt_summary_geometry.num_H_reduce                   948
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                 1012
_pdbx_vrpt_summary_geometry.bonds_RMSZ                     0.23
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                1368
_pdbx_vrpt_summary_geometry.angles_RMSZ                    0.41
#
_pdbx_vrpt_summary_em.exp_method                 "electron crystallography"
_pdbx_vrpt_summary_em.ordinal                    1
_pdbx_vrpt_summary_em.contour_level_primary_map  1.6
_pdbx_vrpt_summary_em.atom_inclusion_all_atoms   0.3340
_pdbx_vrpt_summary_em.atom_inclusion_backbone    0.3240
_pdbx_vrpt_summary_em.Q_score                    0.309
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_symm_clashes
  1  1  1  A    1  LYS  A     1  .  ?        ?     ?  
  2  1  1  A    2  VAL  A     2  .  ?        ?     ?  
  3  1  1  A    3  PHE  A     3  .  ?        ?     ?  
  4  1  1  A    4  GLY  A     4  .  ?        ?     ?  
  5  1  1  A    5  ARG  A     5  .  ?        1     ?  
  6  1  1  A    6  CYS  A     6  .  ?        ?     ?  
  7  1  1  A    7  GLU  A     7  .  ?        ?     ?  
  8  1  1  A    8  LEU  A     8  .  ?        ?     ?  
  9  1  1  A    9  ALA  A     9  .  ?        ?     ?  
 10  1  1  A   10  ALA  A    10  .  ?        ?     ?  
 11  1  1  A   11  ALA  A    11  .  ?        ?     ?  
 12  1  1  A   12  MET  A    12  .  ?        ?     ?  
 13  1  1  A   13  LYS  A    13  .  ?        ?     ?  
 14  1  1  A   14  ARG  A    14  .  ?        ?     ?  
 15  1  1  A   15  HIS  A    15  .  ?        1     ?  
 16  1  1  A   16  GLY  A    16  .  ?        ?     ?  
 17  1  1  A   17  LEU  A    17  .  ?        ?     ?  
 18  1  1  A   18  ASP  A    18  .  ?        ?     5  
 19  1  1  A   19  ASN  A    19  .  ?        ?     ?  
 20  1  1  A   20  TYR  A    20  .  ?        ?     ?  
 21  1  1  A   21  ARG  A    21  .  ?        ?     ?  
 22  1  1  A   22  GLY  A    22  .  ?        ?     ?  
 23  1  1  A   23  TYR  A    23  .  ?        ?     ?  
 24  1  1  A   24  SER  A    24  .  ?        ?     ?  
 25  1  1  A   25  LEU  A    25  .  ?        ?     ?  
 26  1  1  A   26  GLY  A    26  .  ?        ?     ?  
 27  1  1  A   27  ASN  A    27  .  ?        ?     ?  
 28  1  1  A   28  TRP  A    28  .  ?        ?     ?  
 29  1  1  A   29  VAL  A    29  .  ?        ?     ?  
 30  1  1  A   30  CYS  A    30  .  ?        ?     ?  
 31  1  1  A   31  ALA  A    31  .  ?        ?     ?  
 32  1  1  A   32  ALA  A    32  .  ?        ?     ?  
 33  1  1  A   33  LYS  A    33  .  ?        1     ?  
 34  1  1  A   34  PHE  A    34  .  ?        1     ?  
 35  1  1  A   35  GLU  A    35  .  ?        ?     ?  
 36  1  1  A   36  SER  A    36  .  ?        ?     ?  
 37  1  1  A   37  ASN  A    37  .  ?        ?     ?  
 38  1  1  A   38  PHE  A    38  .  ?        ?     ?  
 39  1  1  A   39  ASN  A    39  .  ?        ?     ?  
 40  1  1  A   40  THR  A    40  .  ?        1     ?  
 41  1  1  A   41  GLN  A    41  .  ?        ?     ?  
 42  1  1  A   42  ALA  A    42  .  ?        ?     ?  
 43  1  1  A   43  THR  A    43  .  ?        ?     ?  
 44  1  1  A   44  ASN  A    44  .  ?        ?     ?  
 45  1  1  A   45  ARG  A    45  .  ?        ?     ?  
 46  1  1  A   46  ASN  A    46  .  ?        1     ?  
 47  1  1  A   47  THR  A    47  .  ?        ?     ?  
 48  1  1  A   48  ASP  A    48  .  ?        ?     ?  
 49  1  1  A   49  GLY  A    49  .  ?        ?     ?  
 50  1  1  A   50  SER  A    50  .  ?        ?     ?  
 51  1  1  A   51  THR  A    51  .  ?        1     ?  
 52  1  1  A   52  ASP  A    52  .  ?        1     ?  
 53  1  1  A   53  TYR  A    53  .  ?        1     ?  
 54  1  1  A   54  GLY  A    54  .  ?        1     ?  
 55  1  1  A   55  ILE  A    55  .  ?        1     ?  
 56  1  1  A   56  LEU  A    56  .  ?        2     ?  
 57  1  1  A   57  GLN  A    57  .  ?        1     ?  
 58  1  1  A   58  ILE  A    58  .  ?        1     ?  
 59  1  1  A   59  ASN  A    59  .  ?        1     ?  
 60  1  1  A   60  SER  A    60  .  ?        ?     ?  
 61  1  1  A   61  ARG  A    61  .  ?        ?     ?  
 62  1  1  A   62  TRP  A    62  .  ?        ?     ?  
 63  1  1  A   63  TRP  A    63  .  ?        1     ?  
 64  1  1  A   64  CYS  A    64  .  ?        ?     ?  
 65  1  1  A   65  ASN  A    65  .  ?        ?     ?  
 66  1  1  A   66  ASP  A    66  .  ?        ?     ?  
 67  1  1  A   67  GLY  A    67  .  ?        ?     ?  
 68  1  1  A   68  ARG  A    68  .  ?        ?     ?  
 69  1  1  A   69  THR  A    69  .  ?        1     ?  
 70  1  1  A   70  PRO  A    70  .  ?        ?     ?  
 71  1  1  A   71  GLY  A    71  .  ?        4     ?  
 72  1  1  A   72  SER  A    72  .  ?        1     ?  
 73  1  1  A   73  ARG  A    73  .  ?        ?     ?  
 74  1  1  A   74  ASN  A    74  .  ?        ?     ?  
 75  1  1  A   75  LEU  A    75  .  ?        ?     ?  
 76  1  1  A   76  CYS  A    76  .  ?        ?     ?  
 77  1  1  A   77  ASN  A    77  .  ?        ?     ?  
 78  1  1  A   78  ILE  A    78  .  ?        ?     ?  
 79  1  1  A   79  PRO  A    79  .  ?        ?     ?  
 80  1  1  A   80  CYS  A    80  .  ?        ?     ?  
 81  1  1  A   81  SER  A    81  .  ?        ?     ?  
 82  1  1  A   82  ALA  A    82  .  ?        ?     ?  
 83  1  1  A   83  LEU  A    83  .  ?        ?     ?  
 84  1  1  A   84  LEU  A    84  .  ?        ?     ?  
 85  1  1  A   85  SER  A    85  .  ?        ?     ?  
 86  1  1  A   86  SER  A    86  .  ?        ?     ?  
 87  1  1  A   87  ASP  A    87  .  ?        ?     ?  
 88  1  1  A   88  ILE  A    88  .  ?        ?     ?  
 89  1  1  A   89  THR  A    89  .  ?        ?     ?  
 90  1  1  A   90  ALA  A    90  .  ?        ?     ?  
 91  1  1  A   91  SER  A    91  .  ?        ?     ?  
 92  1  1  A   92  VAL  A    92  .  ?        1     ?  
 93  1  1  A   93  ASN  A    93  .  ?        ?     ?  
 94  1  1  A   94  CYS  A    94  .  ?        ?     ?  
 95  1  1  A   95  ALA  A    95  .  ?        ?     ?  
 96  1  1  A   96  LYS  A    96  .  ?        ?     ?  
 97  1  1  A   97  LYS  A    97  .  ?        ?     ?  
 98  1  1  A   98  ILE  A    98  .  ?        2     ?  
 99  1  1  A   99  VAL  A    99  .  ?        ?     ?  
100  1  1  A  100  SER  A   100  .  ?        1     ?  
101  1  1  A  101  ASP  A   101  .  ?        ?     ?  
102  1  1  A  102  GLY  A   102  .  ?        ?     ?  
103  1  1  A  103  ASN  A   103  .  ?        ?     ?  
104  1  1  A  104  GLY  A   104  .  ?        ?     ?  
105  1  1  A  105  MET  A   105  .  ?        ?     ?  
106  1  1  A  106  ASN  A   106  .  ?        ?     ?  
107  1  1  A  107  ALA  A   107  .  ?        ?     ?  
108  1  1  A  108  TRP  A   108  .  ?        1     ?  
109  1  1  A  109  VAL  A   109  .  ?        ?     ?  
110  1  1  A  110  ALA  A   110  .  ?        ?     ?  
111  1  1  A  111  TRP  A   111  .  ?        ?     ?  
112  1  1  A  112  ARG  A   112  .  ?        ?     ?  
113  1  1  A  113  ASN  A   113  .  ?        ?     ?  
114  1  1  A  114  ARG  A   114  .  ?        1     ?  
115  1  1  A  115  CYS  A   115  .  ?        ?     ?  
116  1  1  A  116  LYS  A   116  .  ?        ?     ?  
117  1  1  A  117  GLY  A   117  .  ?        ?     ?  
118  1  1  A  118  THR  A   118  .  ?        ?     ?  
119  1  1  A  119  ASP  A   119  .  ?        ?     ?  
120  1  1  A  120  VAL  A   120  .  ?        ?     ?  
121  1  1  A  121  GLN  A   121  .  ?        1     ?  
122  1  1  A  122  ALA  A   122  .  ?        ?     ?  
123  1  1  A  123  TRP  A   123  .  ?        1     ?  
124  1  1  A  124  ILE  A   124  .  ?        ?     ?  
125  1  1  A  125  ARG  A   125  .  ?        1     ?  
126  1  1  A  126  GLY  A   126  .  ?        ?     ?  
127  1  1  A  127  CYS  A   127  .  ?        ?     ?  
128  1  1  A  128  ARG  A   128  .  ?        ?     5  
129  1  2  B    .  HOH  A  1001  .  ?        ?     ?  
130  1  2  B    .  HOH  A  1002  .  ?        ?     ?  
131  1  2  B    .  HOH  A  1003  .  ?        1     ?  
132  1  2  B    .  HOH  A  1004  .  ?        ?     ?  
133  1  2  B    .  HOH  A  1005  .  ?        ?     ?  
134  1  2  B    .  HOH  A  1006  .  ?        ?     ?  
135  1  2  B    .  HOH  A  1007  .  ?        4     ?  
136  1  2  B    .  HOH  A  1008  .  ?        ?     ?  
137  1  2  B    .  HOH  A  1009  .  ?        1     ?  
138  1  2  B    .  HOH  A  1010  .  ?        ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
  1    1  tttp         ?       ?  ?        15   9  0.24  11  0.28  molprobity  
  2    2  t        -98.3   103.5  Favored   9   7  0.19  10  0.43  molprobity  
  3    3  m-85     -67.3   148.7  Favored   9  12  0.33  16  0.31  molprobity  
  4    4  ?        -79.0   164.1  Favored   3   4  0.31   5  1.18  molprobity  
  5    5  ttp85    -62.9   -57.0  Favored  13  11  0.18  14  0.33  molprobity  
  6    6  m        -67.5   -26.0  Favored   4   6  0.18   8  0.26  molprobity  
  7    7  tt0      -67.1   -39.3  Favored   6   9  0.22  12  0.28  molprobity  
  8    8  tp       -78.9   -29.9  Favored  11   8  0.22  11  0.37  molprobity  
  9    9  ?        -62.0   -45.5  Favored   5   5  0.20   7  0.26  molprobity  
 10   10  ?        -71.3   -32.2  Favored   5   5  0.14   7  0.25  molprobity  
 11   11  ?        -71.9   -35.0  Favored   5   5  0.15   7  0.25  molprobity  
 12   12  mtt      -78.4   -36.4  Favored   9   8  0.21  10  0.23  molprobity  
 13   13  tttt     -62.2   -50.6  Favored  13   9  0.25  11  0.30  molprobity  
 14   14  ttp85    -57.7   -35.3  Favored  13  11  0.20  14  0.37  molprobity  
 15   15  m80      -84.4    -9.7  Favored   7  11  0.20  15  0.41  molprobity  
 16   16  ?        110.8    26.2  Favored   3   4  0.24   5  0.83  molprobity  
 17   17  mt       -95.5   -34.4  Favored  11   8  0.26  11  0.60  molprobity  
 18   18  p-10     -47.8   108.7  Allowed   4   8  0.50  11  0.44  molprobity  
 19   19  t30       63.2    26.2  Favored   6   8  0.20  11  0.35  molprobity  
 20   20  t80      -74.7   121.7  Favored   9  13  0.25  18  0.45  molprobity  
 21   21  mmt180    57.7    35.3  Favored  13  11  0.20  14  0.45  molprobity  
 22   22  ?         74.0     9.9  Favored   3   4  0.25   5  0.27  molprobity  
 23   23  m-85     -97.8   106.1  Favored   9  13  0.27  18  0.27  molprobity  
 24   24  p        -53.2   152.1  Favored   5   6  0.15   8  0.35  molprobity  
 25   25  tp       -50.9   -29.7  Favored  11   8  0.18  11  0.40  molprobity  
 26   26  ?        -64.0   -37.8  Favored   3   4  0.29   5  0.16  molprobity  
 27   27  m-80     -63.8   -35.6  Favored   6   8  0.19  11  0.33  molprobity  
 28   28  m95      -74.1   -44.2  Favored  10  16  0.24  23  0.21  molprobity  
 29   29  t        -62.9   -44.5  Favored   9   7  0.18  10  0.49  molprobity  
 30   30  t        -57.2   -46.2  Favored   4   6  0.24   8  0.40  molprobity  
 31   31  ?        -60.3   -51.9  Favored   5   5  0.23   7  0.30  molprobity  
 32   32  ?        -62.4   -21.7  Favored   5   5  0.23   7  0.22  molprobity  
 33   33  tptt     -74.6   -43.9  Favored  13   9  0.22  11  0.23  molprobity  
 34   34  m-85     -92.4    -6.8  Favored   9  12  0.38  16  0.29  molprobity  
 35   35  mm-40    -93.2   -51.3  Favored   6   9  0.27  12  0.34  molprobity  
 36   36  p       -123.9    -5.6  Favored   5   6  0.12   8  0.51  molprobity  
 37   37  t30       58.4    41.6  Favored   6   8  0.19  11  0.49  molprobity  
 38   38  m-85      62.6    12.6  Favored   9  12  0.36  16  0.28  molprobity  
 39   39  t-20     -92.5   122.0  Favored   6   8  0.18  11  0.22  molprobity  
 40   40  p        -72.9   -29.1  Favored   7   7  0.20  10  0.66  molprobity  
 41   41  mt-30    -88.2    18.4  Favored   8   9  0.25  12  0.53  molprobity  
 42   42  ?        -69.9   127.9  Favored   5   5  0.16   7  0.34  molprobity  
 43   43  p       -131.2   121.4  Favored   7   7  0.24  10  0.60  molprobity  
 44   44  m-20    -128.2   116.9  Favored   6   8  0.19  11  0.34  molprobity  
 45   45  tpp180   -77.5   119.4  Favored  13  11  0.17  14  0.28  molprobity  
 46   46  m120     -77.3   170.5  Favored   6   8  0.20  11  0.26  molprobity  
 47   47  p        -71.0   -24.3  Favored   7   7  0.22  10  0.63  molprobity  
 48   48  p-10     -84.0     0.4  Favored   4   8  0.11  11  0.29  molprobity  
 49   49  ?        104.2   -21.1  Favored   3   4  0.22   5  0.19  molprobity  
 50   50  p        -73.8   173.2  Favored   5   6  0.20   8  0.23  molprobity  
 51   51  m       -138.0   139.7  Favored   7   7  0.27  10  0.49  molprobity  
 52   52  m-20     -91.4   132.0  Favored   4   8  0.20  11  0.26  molprobity  
 53   53  m-85    -122.9   131.0  Favored   9  13  0.34  18  0.44  molprobity  
 54   54  ?         97.0  -163.4  Favored   3   4  0.44   5  1.07  molprobity  
 55   55  tp       -62.5   -27.1  Favored  11   8  0.24  11  0.32  molprobity  
 56   56  mt      -120.8    15.1  Favored  11   8  0.15  11  0.33  molprobity  
 57   57  mm-40     48.7    55.3  Favored   8   9  0.27  12  0.44  molprobity  
 58   58  mt       -74.7   126.8  Favored  11   8  0.35  11  0.35  molprobity  
 59   59  t-20     -72.4   146.7  Favored   6   8  0.22  11  0.40  molprobity  
 60   60  p        -92.4    -0.5  Favored   5   6  0.18   8  0.35  molprobity  
 61   61  ttm180   -81.9   -36.6  Favored  13  11  0.24  14  0.47  molprobity  
 62   62  m95     -112.5   -30.7  Favored  10  16  0.33  23  0.38  molprobity  
 63   63  m95     -114.9   -33.2  Favored  10  16  0.20  23  0.50  molprobity  
 64   64  p       -138.1   163.2  Favored   4   6  0.22   8  0.22  molprobity  
 65   65  t30     -105.8   123.3  Favored   6   8  0.27  11  0.34  molprobity  
 66   66  p30     -116.6     6.7  Favored   4   8  0.15  11  0.40  molprobity  
 67   67  ?         68.3     1.0  Favored   3   4  0.22   5  0.45  molprobity  
 68   68  ptt180  -129.8    34.9  Favored  13  11  0.17  14  0.38  molprobity  
 69   69  m       -141.6    84.0  Favored   7   7  0.33  11  0.54  molprobity  
 70   70  Cg_exo   -55.3   134.6  Favored   7   8  0.25  11  0.39  molprobity  
 71   71  ?         89.9     8.9  Favored   3   4  0.47   5  0.65  molprobity  
 72   72  t        -60.2   131.7  Favored   5   6  0.32   8  0.52  molprobity  
 73   73  mmm-85   -92.2   -40.0  Favored  13  11  0.34  14  0.69  molprobity  
 74   74  t30       49.9    58.4  Favored   6   8  0.31  11  0.30  molprobity  
 75   75  mt       -73.6   -24.6  Favored  11   8  0.22  11  0.25  molprobity  
 76   76  m        -85.6    -7.8  Favored   4   6  0.16   8  0.41  molprobity  
 77   77  t30       54.2    54.8  Favored   6   8  0.23  11  0.34  molprobity  
 78   78  pt      -144.3   150.9  Favored  11   8  0.11  12  0.59  molprobity  
 79   79  Cg_exo   -69.7   138.9  Favored   7   8  0.18  11  0.30  molprobity  
 80   80  m        -59.3   -22.9  Favored   4   6  0.39   8  0.40  molprobity  
 81   81  p        -66.1   -31.8  Favored   5   6  0.16   8  0.21  molprobity  
 82   82  ?        -66.0   -18.1  Favored   5   5  0.17   7  0.28  molprobity  
 83   83  mt       -83.0     1.7  Favored  11   8  0.18  11  0.23  molprobity  
 84   84  mt      -110.6     2.5  Favored  11   8  0.17  11  0.67  molprobity  
 85   85  p        -70.7   156.6  Favored   5   6  0.19   8  0.20  molprobity  
 86   86  m        -60.9   -33.6  Favored   5   6  0.19   8  0.35  molprobity  
 87   87  t0       -76.6   114.7  Favored   4   8  0.18  11  0.35  molprobity  
 88   88  pt       -84.3     8.6  Allowed  11   8  0.19  11  0.69  molprobity  
 89   89  m        -51.7   -51.2  Favored   7   7  0.23  10  0.58  molprobity  
 90   90  ?        -59.5   -41.7  Favored   5   5  0.13   7  0.24  molprobity  
 91   91  m        -67.3   -36.8  Favored   5   6  0.23   8  0.15  molprobity  
 92   92  t        -73.6   -47.0  Favored   9   7  0.18  10  0.49  molprobity  
 93   93  m-20     -53.4   -38.6  Favored   6   8  0.20  11  0.32  molprobity  
 94   94  t        -82.1   -34.7  Favored   4   6  0.20   8  0.16  molprobity  
 95   95  ?        -62.1   -33.5  Favored   5   5  0.30   7  0.39  molprobity  
 96   96  mttt     -66.2   -31.7  Favored  13   9  0.21  11  0.22  molprobity  
 97   97  mttp     -76.2   -35.8  Favored  13   9  0.20  11  0.26  molprobity  
 98   98  mt       -69.2   -44.9  Favored  11   8  0.20  11  0.53  molprobity  
 99   99  p        -76.8    -3.9  Favored   9   7  0.26  10  0.38  molprobity  
100  100  m       -111.2    11.6  Favored   5   6  0.18   8  0.19  molprobity  
101  101  t0       -76.6   -17.7  Favored   4   8  0.13  11  0.24  molprobity  
102  102  ?        130.7   -37.2  Favored   3   4  0.26   5  0.18  molprobity  
103  103  m-20     -89.6     0.8  Favored   6   8  0.23  11  0.28  molprobity  
104  104  ?         60.7  -139.0  Favored   3   4  0.21   5  0.19  molprobity  
105  105  mtp      -78.3     2.0  Favored   9   8  0.21  10  0.31  molprobity  
106  106  m-20     -66.6   -19.8  Favored   6   8  0.16  11  0.36  molprobity  
107  107  ?        -57.4   -35.0  Favored   5   5  0.16   7  0.29  molprobity  
108  108  m-90     -84.6   104.5  Favored  10  16  0.14  23  0.24  molprobity  
109  109  t        -57.2   -35.0  Favored   9   7  0.21  10  0.37  molprobity  
110  110  ?        -67.6   -41.5  Favored   5   5  0.11   7  0.20  molprobity  
111  111  t90      -60.5   -50.4  Favored  10  16  0.16  23  0.25  molprobity  
112  112  ttp85    -61.0   -33.2  Favored  13  11  0.18  14  0.33  molprobity  
113  113  m-20     -91.4   -26.2  Favored   6   8  0.18  11  0.53  molprobity  
114  114  mtp180  -124.7   -12.0  Favored  13  11  0.13  14  0.41  molprobity  
115  115  m       -120.4   -45.2  Favored   4   6  0.36   8  0.41  molprobity  
116  116  tttt     -54.6   120.4  Favored  13   9  0.18  11  0.30  molprobity  
117  117  ?         92.6   -14.6  Favored   3   4  0.25   5  0.29  molprobity  
118  118  p        -90.3   166.1  Favored   7   7  0.26  10  0.84  molprobity  
119  119  t0       -71.4    78.1  Allowed   4   8  0.17  11  0.31  molprobity  
120  120  m        -71.8   -13.8  Favored   9   7  0.22  10  0.45  molprobity  
121  121  tm0?     -49.9   -40.4  Favored   8   9  0.27  12  0.31  molprobity  
122  122  ?        -64.6   -13.6  Favored   5   5  0.20   7  0.36  molprobity  
123  123  m95      -81.0   -20.7  Favored  10  16  0.20  23  0.25  molprobity  
124  124  pt      -106.4    30.5  Allowed  11   8  0.17  11  0.44  molprobity  
125  125  ptt180   -65.3   141.5  Favored  13  11  0.17  14  0.42  molprobity  
126  126  ?         53.0     5.1  Allowed   3   4  0.25   5  0.53  molprobity  
127  127  m        -81.9   118.1  Favored   4   6  0.25   8  0.48  molprobity  
128  128  ttp85        ?       ?  ?        13  10  0.31  11  1.16  molprobity  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1    5  NH1    1  0.46  2.31  
 2   15  HB3    2  0.45  1.97  
 3   33  HG2    3  0.56  2.41  
 4   34  HB3    4  0.49  1.94  
 5   40  O      5  0.41  2.20  
 6   46  OD1    6  0.52  2.43  
 7   51  HB     7  0.44  2.52  
 8   52  HB3    8  0.48  1.96  
 9   53  CE1    7  0.44  2.52  
10   54  HA2    5  0.41  2.20  
11   55  HG23   9  0.75  1.66  
12   56  HG     9  0.75  1.66  
13   56  O     10  0.43  2.47  
14   57  HB3    8  0.48  1.96  
15   58  HG23  11  0.56  1.87  
16   59  ND2    6  0.52  2.43  
17   63  CE2   12  0.46  2.51  
18   69  O     13  0.40  2.22  
19   71  O     14  0.80  1.97  
20   71  C     15  0.58  2.39  
21   71  HA3   16  0.50  2.11  
22   71  CA    17  0.45  2.65  
23   72  HB2   13  0.40  2.22  
24   92  HG11   2  0.45  1.97  
25   98  HD11  11  0.56  1.87  
26   98  HG12  12  0.46  2.51  
27  100  O     18  0.50  2.18  
28  108  NE1   10  0.43  2.47  
29  114  HD3    4  0.49  1.94  
30  121  NE2   19  0.68  2.19  
31  123  CH2    3  0.56  2.41  
32  125  HG2    1  0.46  2.31  
33  131  O     18  0.50  2.18  
34  135  O     14  0.80  1.97  
35  135  O     15  0.58  2.39  
36  135  O     16  0.50  2.11  
37  135  O     17  0.45  2.65  
38  137  O     19  0.68  2.19  
#
loop_
_pdbx_vrpt_instance_symm_clashes.ordinal
_pdbx_vrpt_instance_symm_clashes.instance_id
_pdbx_vrpt_instance_symm_clashes.label_atom_id
_pdbx_vrpt_instance_symm_clashes.scid
_pdbx_vrpt_instance_symm_clashes.symop
_pdbx_vrpt_instance_symm_clashes.clashmag
_pdbx_vrpt_instance_symm_clashes.dist
 1   18  OD1  0  1_555  1.46  0.74  
 2   18  OD1  1  1_555  0.98  1.22  
 3   18  OD1  2  1_555  0.40  1.80  
 4   18  CG   3  1_555  0.28  1.92  
 5   18  CG   4  1_555  0.01  2.19  
 6  128  NH2  0  7_554  1.46  0.74  
 7  128  CZ   1  7_554  0.98  1.22  
 8  128  NH1  2  7_554  0.40  1.80  
 9  128  NH2  3  7_554  0.28  1.92  
10  128  NH1  4  7_554  0.01  2.19  
#
loop_
_pdbx_vrpt_model_instance_map_fitting.ordinal
_pdbx_vrpt_model_instance_map_fitting.instance_id
_pdbx_vrpt_model_instance_map_fitting.residue_inclusion
_pdbx_vrpt_model_instance_map_fitting.Q_score
  1    1  0.2222   0.213  
  2    2     0.0   0.049  
  3    3  0.9091   0.619  
  4    4     1.0   0.733  
  5    5  0.8182   0.690  
  6    6  0.8333   0.693  
  7    7  0.5556   0.592  
  8    8   0.875   0.739  
  9    9     0.8   0.717  
 10   10     0.8   0.670  
 11   11     1.0   0.718  
 12   12     0.5   0.712  
 13   13  0.5556   0.667  
 14   14  0.7273   0.695  
 15   15     0.8   0.705  
 16   16    0.75   0.725  
 17   17   0.875   0.700  
 18   18     0.5   0.662  
 19   19   0.375   0.630  
 20   20  0.9167   0.668  
 21   21  0.4545   0.382  
 22   22    0.75   0.671  
 23   23  0.9167   0.710  
 24   24  0.6667   0.655  
 25   25   0.875   0.722  
 26   26     1.0   0.713  
 27   27     1.0   0.755  
 28   28     1.0   0.725  
 29   29  0.7143   0.697  
 30   30  0.8333   0.599  
 31   31     0.6   0.304  
 32   32     0.4   0.200  
 33   33     0.0   0.035  
 34   34     0.0   0.000  
 35   35     0.0   0.000  
 36   36     0.0   0.000  
 37   37     0.0   0.000  
 38   38  0.2727   0.303  
 39   39     0.0   0.000  
 40   40     0.0   0.034  
 41   41     0.0   0.000  
 42   42     0.0   0.000  
 43   43     0.0   0.000  
 44   44     0.0   0.000  
 45   45     0.0   0.000  
 46   46     0.0   0.000  
 47   47     0.0   0.000  
 48   48     0.0   0.000  
 49   49     0.0   0.000  
 50   50     0.0   0.000  
 51   51     0.0   0.000  
 52   52     0.0   0.000  
 53   53     0.0   0.000  
 54   54     0.0   0.000  
 55   55   0.125   0.159  
 56   56   0.375   0.266  
 57   57     0.0   0.000  
 58   58     0.0   0.037  
 59   59     0.0   0.000  
 60   60     0.0   0.000  
 61   61     0.0   0.000  
 62   62     0.0   0.000  
 63   63     0.0   0.000  
 64   64     0.0   0.000  
 65   65     0.0   0.000  
 66   66     0.0   0.000  
 67   67     0.0   0.000  
 68   68     0.0   0.000  
 69   69     0.0   0.000  
 70   70     0.0   0.000  
 71   71     0.0   0.000  
 72   72     0.0   0.000  
 73   73     0.0   0.000  
 74   74     0.0   0.000  
 75   75     0.0   0.000  
 76   76     0.0   0.014  
 77   77     0.0   0.000  
 78   78     0.0  -0.002  
 79   79     0.0   0.000  
 80   80     0.0   0.000  
 81   81     0.0   0.000  
 82   82     0.0   0.046  
 83   83     0.0   0.028  
 84   84     0.0   0.000  
 85   85     0.0   0.143  
 86   86  0.3333   0.373  
 87   87     0.5   0.657  
 88   88    0.75   0.715  
 89   89  0.7143   0.676  
 90   90     0.6   0.675  
 91   91  0.8333   0.619  
 92   92  0.8571   0.715  
 93   93   0.625   0.656  
 94   94     0.5   0.636  
 95   95     1.0   0.729  
 96   96  0.7778   0.583  
 97   97     0.0   0.008  
 98   98   0.375   0.295  
 99   99  0.4286   0.465  
100  100     0.0   0.040  
101  101     0.0   0.000  
102  102     0.0   0.000  
103  103     0.0   0.065  
104  104     0.5   0.522  
105  105   0.875   0.694  
106  106     0.5   0.302  
107  107     0.0   0.069  
108  108  0.2857   0.222  
109  109     0.0   0.000  
110  110     0.0   0.000  
111  111  0.6429   0.503  
112  112     0.0   0.010  
113  113     0.0   0.000  
114  114     0.0   0.014  
115  115  0.6667   0.469  
116  116  0.7778   0.694  
117  117    0.75   0.706  
118  118  0.7143   0.661  
119  119     0.5   0.673  
120  120  0.8571   0.734  
121  121  0.4444   0.667  
122  122     0.2   0.679  
123  123  0.7143   0.657  
124  124    0.75   0.670  
125  125  0.1818   0.620  
126  126    0.25   0.551  
127  127     0.5   0.656  
128  128  0.0909   0.411  
#
_pdbx_vrpt_em_details.ordinal                    1
_pdbx_vrpt_em_details.recommended_contour_level  1.6
#
loop_
_pdbx_vrpt_em_graph_atom_inclusion.graph_id
_pdbx_vrpt_em_graph_atom_inclusion.type
atom_inclusion_all_atoms  all_atoms  
atom_inclusion_backbone   backbone   
#
loop_
_pdbx_vrpt_em_2d_graph_info.graph_data_id
_pdbx_vrpt_em_2d_graph_info.graph_id
_pdbx_vrpt_em_2d_graph_info.title
_pdbx_vrpt_em_2d_graph_info.x_axis_title
_pdbx_vrpt_em_2d_graph_info.x_axis_scale
_pdbx_vrpt_em_2d_graph_info.x_axis_units
_pdbx_vrpt_em_2d_graph_info.y_axis_title
_pdbx_vrpt_em_2d_graph_info.y_axis_scale
_pdbx_vrpt_em_2d_graph_info.y_axis_units
d_dvd    map_value_distribution    ?     Map-value        ?     .  "Number of voxels"                  log10  .    
d_ve     volume_estimate           ?     "Contour level"  ?     .  Volume                              ?      nm3  
d_ai_aa  atom_inclusion_all_atoms  ?     "Contour level"  ?     .  "Fraction of model inside the map"  ?      .    
d_ai_bb  atom_inclusion_backbone   ?     "Contour level"  ?     .  "Fraction of model inside the map"  ?      .    
#
loop_
_pdbx_vrpt_em_2d_graph_data.ordinal
_pdbx_vrpt_em_2d_graph_data.graph_data_id
_pdbx_vrpt_em_2d_graph_data.x_value
_pdbx_vrpt_em_2d_graph_data.y_value
  1  d_dvd    -3.2172849178     0.903089987  
  2  d_dvd    -3.1511947452    1.2041199827  
  3  d_dvd    -3.0851045725    1.1461280357  
  4  d_dvd    -3.0190143998     1.531478917  
  5  d_dvd    -2.9529242272    1.3424226808  
  6  d_dvd    -2.8868340545    1.3802112417  
  7  d_dvd    -2.8207438818    1.6232492904  
  8  d_dvd    -2.7546537091    1.6989700043  
  9  d_dvd    -2.6885635365    1.7634279936  
 10  d_dvd    -2.6224733638    1.8325089127  
 11  d_dvd    -2.5563831911    2.0253058653  
 12  d_dvd    -2.4902930185    2.1271047984  
 13  d_dvd    -2.4242028458    2.2552725051  
 14  d_dvd    -2.3581126731    2.3979400087  
 15  d_dvd    -2.2920225005    2.5415792439  
 16  d_dvd    -2.2259323278    2.6665179806  
 17  d_dvd    -2.1598421551    2.7291647897  
 18  d_dvd    -2.0937519824    2.8965262175  
 19  d_dvd    -2.0276618098    2.9324737647  
 20  d_dvd    -1.9615716371    3.0030294706  
 21  d_dvd    -1.8954814644    3.0948203804  
 22  d_dvd    -1.8293912918     3.157758886  
 23  d_dvd    -1.7633011191    3.2593549273  
 24  d_dvd    -1.6972109464    3.2922560714  
 25  d_dvd    -1.6311207738    3.3776704393  
 26  d_dvd    -1.5650306011    3.4462264018  
 27  d_dvd    -1.4989404284    3.5167997041  
 28  d_dvd    -1.4328502557    3.5714759037  
 29  d_dvd    -1.3667600831    3.6358856853  
 30  d_dvd    -1.3006699104    3.6718205602  
 31  d_dvd    -1.2345797377    3.7195798577  
 32  d_dvd    -1.1684895651    3.7623033633  
 33  d_dvd    -1.1023993924    3.8124454029  
 34  d_dvd    -1.0363092197    3.8508299598  
 35  d_dvd    -0.9702190471    3.8977919819  
 36  d_dvd    -0.9041288744    3.9287542022  
 37  d_dvd    -0.8380387017    3.9501700598  
 38  d_dvd     -0.771948529    3.9800488451  
 39  d_dvd    -0.7058583564    4.0039342062  
 40  d_dvd    -0.6397681837    4.0536545583  
 41  d_dvd     -0.573678011    4.0738649229  
 42  d_dvd    -0.5075878384    4.0917724414  
 43  d_dvd    -0.4414976657    4.1025709019  
 44  d_dvd     -0.375407493    4.1248301494  
 45  d_dvd    -0.3093173204    4.1514311437  
 46  d_dvd    -0.2432271477    4.1652443261  
 47  d_dvd     -0.177136975    4.1635489649  
 48  d_dvd    -0.1110468023     4.167583148  
 49  d_dvd    -0.0449566297    4.1583323317  
 50  d_dvd      0.021133543    4.1522577592  
 51  d_dvd     0.0872237157     4.125253486  
 52  d_dvd     0.1533138883    4.1173375951  
 53  d_dvd      0.219404061    4.0747067565  
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427  d_ai_bb      -0.528757           0.432  
428  d_ai_bb      -0.463184           0.432  
429  d_ai_bb       -0.39761           0.432  
430  d_ai_bb      -0.332036           0.432  
431  d_ai_bb      -0.266462           0.432  
432  d_ai_bb      -0.200888            0.43  
433  d_ai_bb      -0.135314            0.43  
434  d_ai_bb       -0.06974            0.43  
435  d_ai_bb      -0.004167           0.428  
436  d_ai_bb       0.061407           0.428  
437  d_ai_bb       0.126981           0.428  
438  d_ai_bb       0.192555           0.428  
439  d_ai_bb       0.258129           0.428  
440  d_ai_bb       0.323703           0.428  
441  d_ai_bb       0.389276           0.428  
442  d_ai_bb        0.45485           0.426  
443  d_ai_bb       0.520424           0.426  
444  d_ai_bb       0.585998           0.426  
445  d_ai_bb       0.651572           0.418  
446  d_ai_bb       0.717146           0.414  
447  d_ai_bb        0.78272           0.412  
448  d_ai_bb       0.848293            0.41  
449  d_ai_bb       0.913867           0.402  
450  d_ai_bb       0.979441             0.4  
451  d_ai_bb       1.045015           0.391  
452  d_ai_bb       1.110589           0.387  
453  d_ai_bb       1.176163           0.383  
454  d_ai_bb       1.241736           0.377  
455  d_ai_bb        1.30731           0.367  
456  d_ai_bb       1.372884           0.357  
457  d_ai_bb       1.438458           0.348  
458  d_ai_bb       1.504032           0.334  
459  d_ai_bb            1.6           0.324  
460  d_ai_bb       1.635179            0.32  
461  d_ai_bb       1.700753           0.303  
462  d_ai_bb       1.766327           0.287  
463  d_ai_bb       1.831901           0.275  
464  d_ai_bb       1.897475           0.271  
465  d_ai_bb       1.963049           0.256  
466  d_ai_bb       2.028623           0.236  
467  d_ai_bb       2.094196           0.217  
468  d_ai_bb        2.15977           0.205  
469  d_ai_bb       2.225344           0.193  
470  d_ai_bb       2.290918           0.166  
471  d_ai_bb       2.356492            0.15  
472  d_ai_bb       2.422066           0.135  
473  d_ai_bb       2.487639           0.125  
474  d_ai_bb       2.553213           0.109  
475  d_ai_bb       2.618787           0.098  
476  d_ai_bb       2.684361           0.086  
477  d_ai_bb       2.749935           0.082  
478  d_ai_bb       2.815509           0.055  
479  d_ai_bb       2.881082           0.045  
480  d_ai_bb       2.946656           0.039  
481  d_ai_bb        3.01223           0.035  
482  d_ai_bb       3.077804           0.031  
483  d_ai_bb       3.143378           0.023  
484  d_ai_bb       3.208952           0.023  
485  d_ai_bb       3.274526           0.014  
486  d_ai_bb       3.340099           0.012  
487  d_ai_bb       3.405673           0.012  
488  d_ai_bb       3.471247           0.006  
489  d_ai_bb       3.536821           0.004  
490  d_ai_bb       3.602395           0.004  
491  d_ai_bb       3.667969           0.004  
492  d_ai_bb       3.733542           0.004  
493  d_ai_bb       3.799116           0.004  
494  d_ai_bb        3.86469           0.004  
495  d_ai_bb       3.930264           0.002  
496  d_ai_bb       3.995838           0.002  
497  d_ai_bb       4.061412           0.002  
498  d_ai_bb       4.126986             0.0  
499  d_ai_bb       4.192559             0.0  
500  d_ai_bb       4.258133             0.0  
501  d_ai_bb       4.323707             0.0  
502  d_ai_bb       4.389281             0.0  
503  d_ai_bb       4.454855             0.0  
504  d_ai_bb       4.520429             0.0  
505  d_ai_bb       4.586002             0.0  
506  d_ai_bb       4.651576             0.0  
507  d_ai_bb        4.71715             0.0  
508  d_ai_bb       4.782724             0.0  
509  d_ai_bb       4.848298             0.0  
510  d_ai_bb       4.913872             0.0  
511  d_ai_bb       4.979445             0.0  
512  d_ai_bb       5.045019             0.0  
513  d_ai_bb       5.110593             0.0  
514  d_ai_bb       5.176167             0.0  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity      4.02b-467                                                             Y  
2  visualanalysis  0.0.1.dev117                                                          Y  
3  percentiles     "20231227.v01 (using entries in the PDB archive December 27th 2023)"  Y  
4  chimera         1.16                                                                  Y  
5  mapq            1.8.1                                                                 Y  
##
