data_3GNY

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  3GNY
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    3GNY
_pdbx_vrpt_summary.PDB_deposition_date         2009-03-18
_pdbx_vrpt_summary.PDB_revision_number         5
_pdbx_vrpt_summary.PDB_revision_date           2023-09-06
_pdbx_vrpt_summary.report_creation_date        2023-08-26:20:44
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,mogul,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer      "Neutrophil defensin 1"  
2  non-polymer  "CHLORIDE ION"  
3  non-polymer  GLYCEROL  
4  water        water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  1  
C  2  
D  3  
E  3  
F  4  
G  4  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all   x-ray  
2  1.56  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore           
2  Ramachandran_outlier_percent  
3  rotamer_outliers_percent      
4  RSRZ_outliers_percent         
5  R_value_R_free                
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
 1  1  1   75.45  141614     ?     ?  
 2  2  1   61.09    1529  1.56  1.56  
 3  1  2  100.00  138981     ?     ?  
 4  2  2  100.00    1498  1.56  1.56  
 5  1  3   51.52  138945     ?     ?  
 6  2  3   22.54    1495  1.56  1.56  
 7  1  4   46.01  127900     ?     ?  
 8  2  4   53.92    1465  1.56  1.56  
 9  1  5   57.97  130704     ?     ?  
10  2  5   20.85    1483  1.56  1.56  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
 1  3  2  A  1  1  A  100.00  
 2  4  2  A  1  1  A  100.00  
 3  5  3  A  1  1  A   28.77  
 4  6  3  A  1  1  A    4.75  
 5  7  4  A  1  1  A  100.00  
 6  8  4  A  1  1  A  100.00  
 7  3  2  B  1  1  B  100.00  
 8  4  2  B  1  1  B  100.00  
 9  5  3  B  1  1  B  100.00  
10  6  3  B  1  1  B  100.00  
11  7  4  B  1  1  B   17.39  
12  8  4  B  1  1  B   20.82  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  0.70  0.57  244  327  
2  1  1  B  B  0.66  0.58  244  327  
#
_pdbx_vrpt_summary_geometry.ordinal                        1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers  0.00
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers       2.17
_pdbx_vrpt_summary_geometry.clashscore                     3.14
_pdbx_vrpt_summary_geometry.num_H_reduce                   466
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                 488
_pdbx_vrpt_summary_geometry.bonds_RMSZ                     0.57
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                654
_pdbx_vrpt_summary_geometry.angles_RMSZ                    0.68
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 219.395
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            51.529
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         18.772
_pdbx_vrpt_summary_diffraction.I_over_sigma              1.54(1.56A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        8119
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.520
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.411
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.490
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.325
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.962
_pdbx_vrpt_summary_diffraction.DCC_R                     0.19
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.23
_pdbx_vrpt_summary_diffraction.EDS_R                     0.20
_pdbx_vrpt_summary_diffraction.EDS_res_high              1.56
_pdbx_vrpt_summary_diffraction.EDS_res_low               30.12
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[21.137,21.268,15.405,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.304
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 19.31% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             FULL
_pdbx_vrpt_summary_diffraction.acentric_outliers         1
_pdbx_vrpt_summary_diffraction.centric_outliers          0
_pdbx_vrpt_summary_diffraction.data_completeness         94.69
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      379
_pdbx_vrpt_summary_diffraction.percent_free_reflections  4.66
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     3.33
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       1.56
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        20.00
_pdbx_vrpt_summary_diffraction.PDB_R                     0.17
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.19
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
  1  1  1  A   1  ALA  A   1  .  ?        ?     ?  
  2  1  1  A   2  CYS  A   2  .  ?        ?     ?  
  3  1  1  A   3  TYR  A   3  .  ?        ?     ?  
  4  1  1  A   4  CYS  A   4  .  ?        ?     ?  
  5  1  1  A   5  ARG  A   5  .  ?        ?     ?  
  6  1  1  A   6  ILE  A   6  .  ?        ?     ?  
  7  1  1  A   7  PRO  A   7  .  ?        ?     ?  
  8  1  1  A   8  ALA  A   8  .  ?        ?     ?  
  9  1  1  A   9  CYS  A   9  .  ?        ?     ?  
 10  1  1  A  10  ILE  A  10  .  ?        ?     ?  
 11  1  1  A  11  ALA  A  11  .  ?        ?     ?  
 12  1  1  A  12  GLY  A  12  .  ?        ?     ?  
 13  1  1  A  13  GLU  A  13  .  ?        ?     ?  
 14  1  1  A  14  ARG  A  14  .  ?        6     ?  
 15  1  1  A  15  ARG  A  15  .  ?        ?     ?  
 16  1  1  A  16  TYR  A  16  .  ?        ?     ?  
 17  1  1  A  17  GLY  A  17  .  ?        ?     ?  
 18  1  1  A  18  THR  A  18  .  ?        ?     ?  
 19  1  1  A  19  CYS  A  19  .  ?        ?     ?  
 20  1  1  A  20  ILE  A  20  .  ?        ?     ?  
 21  1  1  A  21  TYR  A  21  .  ?        ?     ?  
 22  1  1  A  22  GLN  A  22  .  ?        ?     ?  
 23  1  1  A  23  GLY  A  23  .  ?        ?     ?  
 24  1  1  A  24  ARG  A  24  .  ?        ?     ?  
 25  1  1  A  25  LEU  A  25  .  ?        ?     ?  
 26  1  1  A  26  TRP  A  26  .  ?        ?     ?  
 27  1  1  A  27  ALA  A  27  .  ?        ?     ?  
 28  1  1  A  28  PHE  A  28  .  ?        ?     ?  
 29  1  1  A  29  CYS  A  29  .  ?        ?     ?  
 30  1  1  A  30  CYS  A  30  .  ?        ?     ?  
 31  1  1  B   1  ALA  B   1  .  ?        ?     ?  
 32  1  1  B   2  CYS  B   2  .  ?        ?     ?  
 33  1  1  B   3  TYR  B   3  .  ?        ?     ?  
 34  1  1  B   4  CYS  B   4  .  ?        ?     ?  
 35  1  1  B   5  ARG  B   5  .  ?        ?     ?  
 36  1  1  B   6  ILE  B   6  .  ?        ?     ?  
 37  1  1  B   7  PRO  B   7  .  ?        ?     ?  
 38  1  1  B   8  ALA  B   8  .  ?        ?     ?  
 39  1  1  B   9  CYS  B   9  .  ?        ?     ?  
 40  1  1  B  10  ILE  B  10  .  ?        ?     ?  
 41  1  1  B  11  ALA  B  11  .  ?        ?     ?  
 42  1  1  B  12  GLY  B  12  .  ?        ?     ?  
 43  1  1  B  13  GLU  B  13  .  ?        ?     ?  
 44  1  1  B  14  ARG  B  14  .  ?        ?     ?  
 45  1  1  B  15  ARG  B  15  .  ?        ?     ?  
 46  1  1  B  16  TYR  B  16  .  ?        ?     ?  
 47  1  1  B  17  GLY  B  17  .  ?        ?     ?  
 48  1  1  B  18  THR  B  18  .  ?        ?     ?  
 49  1  1  B  19  CYS  B  19  .  ?        ?     ?  
 50  1  1  B  20  ILE  B  20  .  ?        ?     ?  
 51  1  1  B  21  TYR  B  21  .  ?        ?     ?  
 52  1  1  B  22  GLN  B  22  .  ?        ?     ?  
 53  1  1  B  23  GLY  B  23  .  ?        ?     ?  
 54  1  1  B  24  ARG  B  24  .  ?        ?     ?  
 55  1  1  B  25  LEU  B  25  .  ?        ?     ?  
 56  1  1  B  26  TRP  B  26  .  ?        ?     ?  
 57  1  1  B  27  ALA  B  27  .  ?        ?     ?  
 58  1  1  B  28  PHE  B  28  .  ?        ?     ?  
 59  1  1  B  29  CYS  B  29  .  ?        ?     ?  
 60  1  1  B  30  CYS  B  30  .  ?        ?     ?  
 61  1  2  C   .  CL   A  31  .  ?        ?     ?  
 62  1  3  D   .  GOL  A  32  .  ?        ?     4  
 63  1  3  E   .  GOL  B  31  .  ?        ?     ?  
 64  1  4  F   .  HOH  A  33  .  ?        ?     ?  
 65  1  4  F   .  HOH  A  34  .  ?        ?     ?  
 66  1  4  F   .  HOH  A  35  .  ?        ?     ?  
 67  1  4  F   .  HOH  A  36  .  ?        ?     ?  
 68  1  4  F   .  HOH  A  37  .  ?        ?     ?  
 69  1  4  F   .  HOH  A  38  .  ?        ?     ?  
 70  1  4  F   .  HOH  A  39  .  ?        ?     ?  
 71  1  4  F   .  HOH  A  40  .  ?        ?     ?  
 72  1  4  F   .  HOH  A  41  .  ?        ?     ?  
 73  1  4  F   .  HOH  A  42  .  ?        ?     ?  
 74  1  4  F   .  HOH  A  43  .  ?        ?     ?  
 75  1  4  F   .  HOH  A  44  .  ?        ?     ?  
 76  1  4  F   .  HOH  A  45  .  ?        ?     ?  
 77  1  4  F   .  HOH  A  46  .  ?        ?     ?  
 78  1  4  F   .  HOH  A  47  .  ?        ?     ?  
 79  1  4  F   .  HOH  A  48  .  ?        ?     ?  
 80  1  4  F   .  HOH  A  49  .  ?        ?     ?  
 81  1  4  F   .  HOH  A  50  .  ?        ?     ?  
 82  1  4  F   .  HOH  A  51  .  ?        ?     ?  
 83  1  4  F   .  HOH  A  52  .  ?        ?     ?  
 84  1  4  F   .  HOH  A  53  .  ?        ?     ?  
 85  1  4  F   .  HOH  A  54  .  ?        ?     ?  
 86  1  4  F   .  HOH  A  55  .  ?        ?     ?  
 87  1  4  F   .  HOH  A  56  .  ?        ?     ?  
 88  1  4  F   .  HOH  A  57  .  ?        ?     ?  
 89  1  4  F   .  HOH  A  58  .  ?        ?     ?  
 90  1  4  F   .  HOH  A  59  .  ?        ?     ?  
 91  1  4  G   .  HOH  B  32  .  ?        ?     ?  
 92  1  4  G   .  HOH  B  33  .  ?        ?     ?  
 93  1  4  G   .  HOH  B  34  .  ?        ?     ?  
 94  1  4  G   .  HOH  B  35  .  ?        ?     ?  
 95  1  4  G   .  HOH  B  36  .  ?        ?     ?  
 96  1  4  G   .  HOH  B  37  .  ?        ?     ?  
 97  1  4  G   .  HOH  B  38  .  ?        ?     ?  
 98  1  4  G   .  HOH  B  39  .  ?        ?     ?  
 99  1  4  G   .  HOH  B  40  .  ?        ?     ?  
100  1  4  G   .  HOH  B  41  .  ?        ?     ?  
101  1  4  G   .  HOH  B  42  .  ?        ?     ?  
102  1  4  G   .  HOH  B  43  .  ?        ?     ?  
103  1  4  G   .  HOH  B  44  .  ?        ?     ?  
104  1  4  G   .  HOH  B  45  .  ?        ?     ?  
105  1  4  G   .  HOH  B  46  .  ?        ?     ?  
106  1  4  G   .  HOH  B  47  .  ?        ?     ?  
107  1  4  G   .  HOH  B  48  .  ?        ?     ?  
108  1  4  G   .  HOH  B  49  .  ?        ?     ?  
109  1  4  G   .  HOH  B  50  .  ?        ?     ?  
110  1  4  G   .  HOH  B  51  .  ?        ?     ?  
111  1  4  G   .  HOH  B  52  .  ?        ?     ?  
112  1  4  G   .  HOH  B  53  .  ?        ?     ?  
113  1  4  G   .  HOH  B  54  .  ?        ?     ?  
114  1  4  G   .  HOH  B  55  .  ?        ?     ?  
115  1  4  G   .  HOH  B  56  .  ?        ?     ?  
116  1  4  G   .  HOH  B  57  .  ?        ?     ?  
117  1  4  G   .  HOH  B  58  .  ?        ?     ?  
118  1  4  G   .  HOH  B  59  .  ?        ?     ?  
119  1  4  G   .  HOH  B  60  .  ?        ?     ?  
120  1  4  G   .  HOH  B  61  .  ?        ?     ?  
121  1  4  G   .  HOH  B  62  .  ?        ?     ?  
122  1  4  G   .  HOH  B  63  .  ?        ?     ?  
123  1  4  G   .  HOH  B  64  .  ?        ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.cis_peptide
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
  1    1  ?             ?       ?  ?        ?        7  16.500     5  0.89     7  0.41  molprobity  1.000  
  2    2  m        -109.4   154.9  Favored  ?        4  12.860     6  0.32     8  0.63  molprobity  1.000  
  3    3  m-85     -139.2   138.4  Favored  ?        9  13.160    13  0.39    18  0.60  molprobity  1.000  
  4    4  m         -83.3   125.3  Favored  ?        4  10.200     6  0.72     8  0.43  molprobity  1.000  
  5    5  mtt-85   -129.1   142.9  Favored  ?       13   8.820    11  0.53    14  0.76  molprobity  1.000  
  6    6  mt       -125.4   132.8  Favored  Y       11   9.080     8  0.34    12  0.78  molprobity  1.000  
  7    7  Cg_endo   -91.7   -10.5  Favored  ?        7  10.320     8  0.26    11  0.68  molprobity  1.000  
  8    8  ?        -164.7   161.8  Favored  ?        5  10.070     5  0.97     7  0.31  molprobity  1.000  
  9    9  m         -62.6   158.4  Favored  ?        4   9.600     6  0.65     8  0.55  molprobity  1.000  
 10   10  pt       -106.5   171.2  Favored  ?       11   8.370     8  0.35    11  0.53  molprobity  1.000  
 11   11  ?         -47.0   132.0  Favored  ?        5   7.550     5  0.58     7  0.33  molprobity  1.000  
 12   12  ?          90.0    -3.2  Favored  ?        3   7.690     4  0.18     5  0.46  molprobity  1.000  
 13   13  mt-10    -114.7   157.4  Favored  ?        6   8.790     9  0.47    12  0.67  molprobity  1.000  
 14   14  OUTLIER  -122.1   146.4  Favored  ?       13  18.980    11  0.47    14  1.55  molprobity  1.000  
 15   15  ttt180    -81.2   121.9  Favored  ?       13  11.790    11  0.28    14  0.57  molprobity  1.000  
 16   16  m-85     -110.4    -7.0  Favored  ?        9  10.940    13  0.58    18  0.69  molprobity  1.000  
 17   17  ?         173.7  -150.8  Favored  ?        3   8.210     4  0.43     5  0.77  molprobity  1.000  
 18   18  m        -139.8   142.6  Favored  ?        7   9.210     7  0.46    10  0.48  molprobity  1.000  
 19   19  m        -111.7   147.8  Favored  ?        4   9.070     6  0.63     8  0.88  molprobity  1.000  
 20   20  mt       -116.8   116.7  Favored  ?       11   7.990     8  0.36    11  0.82  molprobity  1.000  
 21   21  t80      -164.7   134.4  Favored  ?        9   7.190    13  0.82    18  0.72  molprobity  1.000  
 22   22  mm-40      56.5    35.2  Favored  ?        8   7.160     9  0.43    12  0.49  molprobity  1.000  
 23   23  ?          74.4    10.3  Favored  ?        3   8.150     4  0.60     5  0.69  molprobity  1.000  
 24   24  mmm-85   -127.4   157.0  Favored  ?       13  11.230    11  0.82    14  0.85  molprobity  1.000  
 25   25  mt        -89.9   136.9  Favored  ?       11   9.150     8  0.51    11  0.67  molprobity  1.000  
 26   26  m95      -127.5   146.9  Favored  ?       10   8.670    16  0.63    23  0.46  molprobity  1.000  
 27   27  ?         -75.8   133.2  Favored  ?        5   8.620     5  0.38     7  0.40  molprobity  1.000  
 28   28  t80       -92.3   115.7  Favored  ?        9   8.840    12  0.42    16  0.54  molprobity  1.000  
 29   29  m        -122.0   133.5  Favored  ?        4   9.440     6  0.41     8  0.72  molprobity  1.000  
 30   30  m             ?       ?  ?        ?        4  11.400     6  1.13     5  0.87  molprobity  1.000  
 31   31  ?             ?       ?  ?        ?        7  18.040     5  0.76     7  0.36  molprobity  1.000  
 32   32  m        -102.2   154.7  Favored  ?        4  14.530     6  0.77     8  0.56  molprobity  1.000  
 33   33  m-85     -139.1   137.2  Favored  ?        9  16.260    13  0.65    18  0.58  molprobity  1.000  
 34   34  m         -80.7   122.7  Favored  ?        4  12.170     6  0.32     8  0.29  molprobity  1.000  
 35   35  mtt-85   -130.1   144.4  Favored  ?       13  14.110    11  0.35    14  0.89  molprobity  1.000  
 36   36  mt       -121.4   138.9  Favored  Y       11  16.770     8  0.68    12  1.08  molprobity  1.000  
 37   37  Cg_endo   -86.2   -18.8  Favored  ?        7  15.540     8  0.30    11  0.54  molprobity  1.000  
 38   38  ?        -164.4   166.2  Favored  ?        5  11.430     5  0.99     7  0.28  molprobity  1.000  
 39   39  m         -66.4   156.1  Favored  ?        4  10.020     6  0.57     8  0.61  molprobity  1.000  
 40   40  pt        -94.0   160.9  Favored  ?       11  11.810     8  0.50    11  0.40  molprobity  1.000  
 41   41  ?         -49.9   135.8  Favored  ?        5  10.390     5  0.35     7  0.20  molprobity  1.000  
 42   42  ?          94.3   -10.3  Favored  ?        3  11.880     4  0.19     5  0.43  molprobity  1.000  
 43   43  mt-10    -111.3   162.2  Favored  ?        6  11.690     9  0.53    12  0.67  molprobity  1.000  
 44   44  mmm180   -125.4   158.3  Favored  ?       13  17.090    11  0.45    14  0.63  molprobity  1.000  
 45   45  ttt180    -88.9   117.3  Favored  ?       13  11.240    11  0.59    14  0.78  molprobity  1.000  
 46   46  m-85     -110.2    -1.5  Favored  ?        9   8.030    13  0.35    18  0.57  molprobity  1.000  
 47   47  ?         177.6  -157.3  Favored  ?        3   8.200     4  1.09     5  0.68  molprobity  1.000  
 48   48  m        -140.0   139.5  Favored  ?        7  10.000     7  0.37    10  0.40  molprobity  1.000  
 49   49  m        -107.3   142.5  Favored  ?        4  10.610     6  0.64     8  0.80  molprobity  1.000  
 50   50  mt       -120.6   114.3  Favored  ?       11  11.530     8  0.37    11  0.83  molprobity  1.000  
 51   51  p90      -160.7   154.1  Favored  ?        9  15.950    13  0.66    18  0.70  molprobity  1.000  
 52   52  mm100      55.0    33.8  Favored  ?        8  14.610     9  0.83    12  0.63  molprobity  1.000  
 53   53  ?          68.3    19.0  Favored  ?        3  12.160     4  1.32     5  0.68  molprobity  1.000  
 54   54  mtp180   -128.9   154.7  Favored  ?       13  10.650    11  0.40    14  0.94  molprobity  1.000  
 55   55  mt       -101.8   134.2  Favored  ?       11  10.370     8  0.33    11  0.46  molprobity  1.000  
 56   56  m95      -130.3   146.6  Favored  ?       10  10.960    16  0.49    23  0.41  molprobity  1.000  
 57   57  ?         -74.8   137.3  Favored  ?        5   9.650     5  0.34     7  0.47  molprobity  1.000  
 58   58  t80       -99.7   114.1  Favored  ?        9   9.820    12  0.66    16  0.69  molprobity  1.000  
 59   59  m        -118.1   133.2  Favored  ?        4   9.670     6  0.40     8  0.79  molprobity  1.000  
 60   60  m             ?       ?  ?        ?        4  11.480     6  0.58     5  1.02  molprobity  1.000  
 61   61  ?             ?       ?  ?        ?        ?  73.900     ?     ?     ?     ?  ?           1.000  
 62   62  ?             ?       ?  ?        ?        8  35.190     5  0.50     5  0.53  mogul       1.000  
 63   63  ?             ?       ?  ?        ?        8  41.140     5  0.32     5  0.55  mogul       1.000  
 64   64  ?             ?       ?  ?        ?        ?   6.250     ?     ?     ?     ?  ?           1.000  
 65   65  ?             ?       ?  ?        ?        ?  12.030     ?     ?     ?     ?  ?           1.000  
 66   66  ?             ?       ?  ?        ?        ?  27.070     ?     ?     ?     ?  ?           1.000  
 67   67  ?             ?       ?  ?        ?        ?  14.460     ?     ?     ?     ?  ?           1.000  
 68   68  ?             ?       ?  ?        ?        ?  15.050     ?     ?     ?     ?  ?           1.000  
 69   69  ?             ?       ?  ?        ?        ?  22.060     ?     ?     ?     ?  ?           1.000  
 70   70  ?             ?       ?  ?        ?        ?  17.020     ?     ?     ?     ?  ?           1.000  
 71   71  ?             ?       ?  ?        ?        ?  21.740     ?     ?     ?     ?  ?           1.000  
 72   72  ?             ?       ?  ?        ?        ?  31.000     ?     ?     ?     ?  ?           1.000  
 73   73  ?             ?       ?  ?        ?        ?  18.470     ?     ?     ?     ?  ?           1.000  
 74   74  ?             ?       ?  ?        ?        ?  15.860     ?     ?     ?     ?  ?           1.000  
 75   75  ?             ?       ?  ?        ?        ?  27.770     ?     ?     ?     ?  ?           1.000  
 76   76  ?             ?       ?  ?        ?        ?  24.720     ?     ?     ?     ?  ?           1.000  
 77   77  ?             ?       ?  ?        ?        ?  37.530     ?     ?     ?     ?  ?           1.000  
 78   78  ?             ?       ?  ?        ?        ?  20.730     ?     ?     ?     ?  ?           1.000  
 79   79  ?             ?       ?  ?        ?        ?  14.960     ?     ?     ?     ?  ?           1.000  
 80   80  ?             ?       ?  ?        ?        ?  26.720     ?     ?     ?     ?  ?           1.000  
 81   81  ?             ?       ?  ?        ?        ?  39.270     ?     ?     ?     ?  ?           1.000  
 82   82  ?             ?       ?  ?        ?        ?  35.450     ?     ?     ?     ?  ?           1.000  
 83   83  ?             ?       ?  ?        ?        ?  35.920     ?     ?     ?     ?  ?           1.000  
 84   84  ?             ?       ?  ?        ?        ?  28.920     ?     ?     ?     ?  ?           1.000  
 85   85  ?             ?       ?  ?        ?        ?  15.540     ?     ?     ?     ?  ?           1.000  
 86   86  ?             ?       ?  ?        ?        ?  30.270     ?     ?     ?     ?  ?           1.000  
 87   87  ?             ?       ?  ?        ?        ?  17.290     ?     ?     ?     ?  ?           1.000  
 88   88  ?             ?       ?  ?        ?        ?  33.330     ?     ?     ?     ?  ?           1.000  
 89   89  ?             ?       ?  ?        ?        ?  28.560     ?     ?     ?     ?  ?           1.000  
 90   90  ?             ?       ?  ?        ?        ?  33.630     ?     ?     ?     ?  ?           1.000  
 91   91  ?             ?       ?  ?        ?        ?  24.700     ?     ?     ?     ?  ?           1.000  
 92   92  ?             ?       ?  ?        ?        ?  21.860     ?     ?     ?     ?  ?           1.000  
 93   93  ?             ?       ?  ?        ?        ?   8.790     ?     ?     ?     ?  ?           1.000  
 94   94  ?             ?       ?  ?        ?        ?   9.410     ?     ?     ?     ?  ?           1.000  
 95   95  ?             ?       ?  ?        ?        ?  23.780     ?     ?     ?     ?  ?           1.000  
 96   96  ?             ?       ?  ?        ?        ?  26.580     ?     ?     ?     ?  ?           1.000  
 97   97  ?             ?       ?  ?        ?        ?  30.010     ?     ?     ?     ?  ?           1.000  
 98   98  ?             ?       ?  ?        ?        ?  19.730     ?     ?     ?     ?  ?           1.000  
 99   99  ?             ?       ?  ?        ?        ?  24.710     ?     ?     ?     ?  ?           1.000  
100  100  ?             ?       ?  ?        ?        ?  15.630     ?     ?     ?     ?  ?           1.000  
101  101  ?             ?       ?  ?        ?        ?  29.300     ?     ?     ?     ?  ?           1.000  
102  102  ?             ?       ?  ?        ?        ?  23.750     ?     ?     ?     ?  ?           1.000  
103  103  ?             ?       ?  ?        ?        ?  20.820     ?     ?     ?     ?  ?           1.000  
104  104  ?             ?       ?  ?        ?        ?  23.120     ?     ?     ?     ?  ?           1.000  
105  105  ?             ?       ?  ?        ?        ?  19.680     ?     ?     ?     ?  ?           1.000  
106  106  ?             ?       ?  ?        ?        ?  29.210     ?     ?     ?     ?  ?           1.000  
107  107  ?             ?       ?  ?        ?        ?  29.690     ?     ?     ?     ?  ?           1.000  
108  108  ?             ?       ?  ?        ?        ?  28.640     ?     ?     ?     ?  ?           1.000  
109  109  ?             ?       ?  ?        ?        ?  19.330     ?     ?     ?     ?  ?           1.000  
110  110  ?             ?       ?  ?        ?        ?  17.150     ?     ?     ?     ?  ?           1.000  
111  111  ?             ?       ?  ?        ?        ?  18.910     ?     ?     ?     ?  ?           1.000  
112  112  ?             ?       ?  ?        ?        ?  25.430     ?     ?     ?     ?  ?           1.000  
113  113  ?             ?       ?  ?        ?        ?  20.060     ?     ?     ?     ?  ?           1.000  
114  114  ?             ?       ?  ?        ?        ?  29.430     ?     ?     ?     ?  ?           1.000  
115  115  ?             ?       ?  ?        ?        ?  39.450     ?     ?     ?     ?  ?           1.000  
116  116  ?             ?       ?  ?        ?        ?  28.150     ?     ?     ?     ?  ?           1.000  
117  117  ?             ?       ?  ?        ?        ?  22.730     ?     ?     ?     ?  ?           1.000  
118  118  ?             ?       ?  ?        ?        ?  29.990     ?     ?     ?     ?  ?           1.000  
119  119  ?             ?       ?  ?        ?        ?  36.180     ?     ?     ?     ?  ?           1.000  
120  120  ?             ?       ?  ?        ?        ?  26.050     ?     ?     ?     ?  ?           1.000  
121  121  ?             ?       ?  ?        ?        ?  24.090     ?     ?     ?     ?  ?           1.000  
122  122  ?             ?       ?  ?        ?        ?  49.500     ?     ?     ?     ?  ?           1.000  
123  123  ?             ?       ?  ?        ?        ?  27.450     ?     ?     ?     ?  ?           1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
1  14  HH11  1  1.04  1.17  
2  14  HH11  2  0.65  2.02  
3  14  HG2   1  1.04  1.17  
4  14  HG2   3  0.77  1.97  
5  14  NH1   3  0.77  1.97  
6  14  CG    2  0.65  2.02  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
1  62  O1  C1  C2  O2    25.87  57.02  230  43.06   3.17  1.30  
2  62  O1  C1  C2  C3   150.20  54.16  133  34.27   9.84  0.75  
3  62  C1  C2  C3  O3  -139.65  55.03  133  24.01  20.39  0.00  
4  62  O2  C2  C3  O3   -18.23  64.52  230  43.24   4.07  1.30  
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
  1    1   5  0.892  0.155   1.782  
  2    2   6  0.971  0.070  -0.123  
  3    3  12  0.929  0.095   0.443  
  4    4   6  0.985  0.069  -0.155  
  5    5  11  0.959  0.077  -0.517  
  6    6   8  0.969  0.090   0.051  
  7    7   7  0.976  0.059  -0.600  
  8    8   5  0.951  0.078  -0.105  
  9    9   6  0.994  0.056  -0.565  
 10   10   8  0.971  0.058  -0.962  
 11   11   5  0.969  0.050  -0.792  
 12   12   4  0.956  0.071  -0.222  
 13   13   9  0.952  0.080  -0.587  
 14   14  11  0.885  0.213   1.836  
 15   15  11  0.945  0.070  -0.638  
 16   16  12  0.902  0.123   1.305  
 17   17   4  0.973  0.062  -0.412  
 18   18   7  0.961  0.075  -0.207  
 19   19   6  0.973  0.098   0.760  
 20   20   8  0.973  0.100   0.367  
 21   21  12  0.956  0.067  -0.418  
 22   22   9  0.976  0.053  -0.911  
 23   23   4  0.961  0.057  -0.518  
 24   24  11  0.952  0.078  -0.500  
 25   25   8  0.937  0.122   0.997  
 26   26  14  0.978  0.072  -0.209  
 27   27   5  0.968  0.098   0.385  
 28   28  11  0.946  0.095   0.435  
 29   29   6  0.992  0.057  -0.533  
 30   30   7  0.974  0.059  -0.470  
 31   31   5  0.890  0.298   5.287  
 32   32   6  0.949  0.083   0.287  
 33   33  12  0.832  0.160   2.443  
 34   34   6  0.978  0.073  -0.028  
 35   35  11  0.925  0.073  -0.587  
 36   36   8  0.909  0.097   0.272  
 37   37   7  0.944  0.102   0.349  
 38   38   5  0.959  0.064  -0.449  
 39   39   6  0.988  0.057  -0.533  
 40   40   8  0.861  0.143   1.728  
 41   41   5  0.936  0.096   0.336  
 42   42   4  0.905  0.141   1.258  
 43   43   9  0.919  0.082  -0.556  
 44   44  11  0.913  0.159   0.901  
 45   45  11  0.934  0.086  -0.362  
 46   46  12  0.942  0.084   0.105  
 47   47   4  0.949  0.083   0.032  
 48   48   7  0.975  0.081  -0.064  
 49   49   6  0.977  0.098   0.760  
 50   50   8  0.953  0.091   0.082  
 51   51  12  0.924  0.143   1.920  
 52   52   9  0.908  0.135   0.525  
 53   53   4  0.946  0.082   0.011  
 54   54  11  0.932  0.103  -0.067  
 55   55   8  0.924  0.097   0.244  
 56   56  14  0.911  0.107   1.010  
 57   57   5  0.940  0.083   0.017  
 58   58  11  0.944  0.096   0.467  
 59   59   6  0.982  0.085   0.350  
 60   60   7  0.916  0.094   0.634  
 61   61   1  0.612  0.186       ?  
 62   62   6  0.826  0.177       ?  
 63   63   6  0.768  0.196       ?  
 64   64   1  0.997  0.047       ?  
 65   65   1  0.984  0.055       ?  
 66   66   1  0.893  0.071       ?  
 67   67   1  0.976  0.042       ?  
 68   68   1  0.981  0.064       ?  
 69   69   1  0.970  0.164       ?  
 70   70   1  0.923  0.122       ?  
 71   71   1  0.961  0.090       ?  
 72   72   1  0.713  0.447       ?  
 73   73   1  0.937  0.096       ?  
 74   74   1  0.965  0.094       ?  
 75   75   1  0.872  0.132       ?  
 76   76   1  0.932  0.093       ?  
 77   77   1  0.931  0.161       ?  
 78   78   1  0.935  0.076       ?  
 79   79   1  0.872  0.143       ?  
 80   80   1  0.881  0.073       ?  
 81   81   1  0.738  0.171       ?  
 82   82   1  0.415  0.182       ?  
 83   83   1  0.781  0.112       ?  
 84   84   1  0.865  0.118       ?  
 85   85   1  0.975  0.092       ?  
 86   86   1  0.949  0.093       ?  
 87   87   1  0.976  0.103       ?  
 88   88   1  0.819  0.099       ?  
 89   89   1  0.838  0.129       ?  
 90   90   1  0.804  0.118       ?  
 91   91   1  0.912  0.113       ?  
 92   92   1  0.845  0.086       ?  
 93   93   1  0.986  0.192       ?  
 94   94   1  0.978  0.050       ?  
 95   95   1  0.813  0.113       ?  
 96   96   1  0.962  0.094       ?  
 97   97   1  0.840  0.098       ?  
 98   98   1  0.946  0.128       ?  
 99   99   1  0.953  0.066       ?  
100  100   1  0.947  0.054       ?  
101  101   1  0.807  0.243       ?  
102  102   1  0.962  0.113       ?  
103  103   1  0.905  0.072       ?  
104  104   1  0.969  0.084       ?  
105  105   1  0.900  0.099       ?  
106  106   1  0.957  0.219       ?  
107  107   1  0.827  0.106       ?  
108  108   1  0.909  0.141       ?  
109  109   1  0.909  0.117       ?  
110  110   1  0.967  0.171       ?  
111  111   1  0.887  0.094       ?  
112  112   1  0.944  0.201       ?  
113  113   1  0.990  0.036       ?  
114  114   1  0.820  0.161       ?  
115  115   1  0.615  0.167       ?  
116  116   1  0.880  0.229       ?  
117  117   1  0.934  0.074       ?  
118  118   1  0.728  0.272       ?  
119  119   1  0.774  0.151       ?  
120  120   1  0.797  0.347       ?  
121  121   1  0.864  0.081       ?  
122  122   1  0.810  0.207       ?  
123  123   1  0.737  0.203       ?  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  eds          2.35                                                                  Y  
4  dcc          '"2.27  (2023-04-10)"'                                                Y  
5  xtriage      1.13                                                                  Y  
6  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
