data_2VZ4

loop_
_pdbx_vrpt_database.id
_pdbx_vrpt_database.code
PDB   2VZ4       
PDBE  EBI-37028  
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    2VZ4
_pdbx_vrpt_summary.PDB_deposition_date         2008-07-30
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2023-12-13
_pdbx_vrpt_summary.report_creation_date        2023-12-02:14:53
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,xtriage,eds,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer  "HTH-TYPE TRANSCRIPTIONAL ACTIVATOR TIPA"  
2  polymer  "5'-D(*CP*TP*CP*CP*TP*CP*AP*CP*GP*TP *CP*AP*CP*GP*TP*GP*AP*GP*GP*TP*G)-3'"  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  2.9  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore           
2  Ramachandran_outlier_percent  
3  rotamer_outliers_percent      
4  RSRZ_outliers_percent         
5  R_value_R_free                
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
 1  1  1   42.15  141614     ?     ?  
 2  2  1   68.09    2172  2.90  2.90  
 3  1  2  100.00  138981     ?     ?  
 4  2  2  100.00    2115  2.90  2.90  
 5  1  3   24.75  138945     ?     ?  
 6  2  3   57.49    2117  2.90  2.90  
 7  1  4  100.00  127900     ?     ?  
 8  2  4  100.00    1906  2.90  2.90  
 9  1  5   12.99  130704     ?     ?  
10  2  5   36.21    1957  2.90  2.90  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  A  1  1  A  100.00  
2  4  2  A  1  1  A  100.00  
3  5  3  A  1  1  A   24.75  
4  6  3  A  1  1  A   57.49  
5  7  4  A  1  1  A  100.00  
6  8  4  A  1  1  A  100.00  
7  7  4  B  1  2  B  100.00  
8  8  4  B  1  2  B  100.00  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  0.60  0.55  807  1086  
2  1  2  B  B  1.63  0.76  478   735  
#
_pdbx_vrpt_summary_geometry.ordinal                        1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers  0.00
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers       4.94
_pdbx_vrpt_summary_geometry.clashscore                     6.92
_pdbx_vrpt_summary_geometry.num_H_reduce                   1019
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                 1285
_pdbx_vrpt_summary_geometry.bonds_RMSZ                     0.64
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                1821
_pdbx_vrpt_summary_geometry.angles_RMSZ                    1.14
#
_pdbx_vrpt_summary_diffraction.exp_method                x-ray
_pdbx_vrpt_summary_diffraction.ordinal                   1
_pdbx_vrpt_summary_diffraction.Babinet_b                 75.349
_pdbx_vrpt_summary_diffraction.bulk_solvent_b            62.010
_pdbx_vrpt_summary_diffraction.Wilson_B_estimate         65.338
_pdbx_vrpt_summary_diffraction.I_over_sigma              3.23(2.85A)
_pdbx_vrpt_summary_diffraction.num_miller_indices        5427
_pdbx_vrpt_summary_diffraction.Babinet_k                 0.288
_pdbx_vrpt_summary_diffraction.bulk_solvent_k            0.307
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L_mean     0.469
_pdbx_vrpt_summary_diffraction.Padilla_Yeates_L2_mean    0.304
_pdbx_vrpt_summary_diffraction.Fo_Fc_correlation         0.915
_pdbx_vrpt_summary_diffraction.DCC_R                     0.24
_pdbx_vrpt_summary_diffraction.DCC_Rfree                 0.28
_pdbx_vrpt_summary_diffraction.EDS_R                     0.25
_pdbx_vrpt_summary_diffraction.EDS_res_high              2.85
_pdbx_vrpt_summary_diffraction.EDS_res_low               28.59
_pdbx_vrpt_summary_diffraction.Wilson_B_aniso            "[73.563,45.361,87.396,0.000,0.000,0.000]"
_pdbx_vrpt_summary_diffraction.data_anisotropy           0.611
_pdbx_vrpt_summary_diffraction.trans_NCS_details         "The largest off-origin peak in the Patterson function is 7.71% of the height of the origin peak. No significant pseudotranslation is detected."
_pdbx_vrpt_summary_diffraction.B_factor_type             PARTIAL
_pdbx_vrpt_summary_diffraction.acentric_outliers         0
_pdbx_vrpt_summary_diffraction.centric_outliers          1
_pdbx_vrpt_summary_diffraction.data_completeness         95.97
_pdbx_vrpt_summary_diffraction.number_reflns_R_free      245
_pdbx_vrpt_summary_diffraction.percent_free_reflections  4.51
_pdbx_vrpt_summary_diffraction.percent_RSRZ_outliers     0.00
_pdbx_vrpt_summary_diffraction.PDB_resolution_high       2.90
_pdbx_vrpt_summary_diffraction.PDB_resolution_low        30.00
_pdbx_vrpt_summary_diffraction.PDB_R                     0.24
_pdbx_vrpt_summary_diffraction.PDB_Rfree                 0.27
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
  1  1  1  A    1  SER  A    2  .  ?        ?     ?  
  2  1  1  A    2  TYR  A    3  .  ?        ?     ?  
  3  1  1  A    3  SER  A    4  .  ?        ?     ?  
  4  1  1  A    4  VAL  A    5  .  ?        ?     1  
  5  1  1  A    5  GLY  A    6  .  ?        ?     ?  
  6  1  1  A    6  GLN  A    7  .  ?        ?     ?  
  7  1  1  A    7  VAL  A    8  .  ?        ?     1  
  8  1  1  A    8  ALA  A    9  .  ?        ?     ?  
  9  1  1  A    9  GLY  A   10  .  ?        ?     ?  
 10  1  1  A   10  PHE  A   11  .  ?        ?     ?  
 11  1  1  A   11  ALA  A   12  .  ?        ?     ?  
 12  1  1  A   12  GLY  A   13  .  ?        ?     ?  
 13  1  1  A   13  VAL  A   14  .  ?        ?     ?  
 14  1  1  A   14  THR  A   15  .  ?        ?     ?  
 15  1  1  A   15  VAL  A   16  .  ?        ?     1  
 16  1  1  A   16  ARG  A   17  .  ?        ?     ?  
 17  1  1  A   17  THR  A   18  .  ?        ?     ?  
 18  1  1  A   18  LEU  A   19  .  ?        ?     ?  
 19  1  1  A   19  HIS  A   20  .  ?        ?     ?  
 20  1  1  A   20  HIS  A   21  .  ?        ?     2  
 21  1  1  A   21  TYR  A   22  .  ?        ?     ?  
 22  1  1  A   22  ASP  A   23  .  ?        ?     ?  
 23  1  1  A   23  ASP  A   24  .  ?        ?     ?  
 24  1  1  A   24  ILE  A   25  .  ?        ?     2  
 25  1  1  A   25  GLY  A   26  .  ?        ?     ?  
 26  1  1  A   26  LEU  A   27  .  ?        ?     ?  
 27  1  1  A   27  LEU  A   28  .  ?        ?     2  
 28  1  1  A   28  VAL  A   29  .  ?        ?     ?  
 29  1  1  A   29  PRO  A   30  .  ?        ?     1  
 30  1  1  A   30  SER  A   31  .  ?        ?     ?  
 31  1  1  A   31  GLU  A   32  .  ?        ?     ?  
 32  1  1  A   32  ARG  A   33  .  ?        ?     ?  
 33  1  1  A   33  SER  A   34  .  ?        ?     ?  
 34  1  1  A   34  HIS  A   35  .  ?        ?     ?  
 35  1  1  A   35  ALA  A   36  .  ?        ?     ?  
 36  1  1  A   36  GLY  A   37  .  ?        ?     ?  
 37  1  1  A   37  HIS  A   38  .  ?        ?     ?  
 38  1  1  A   38  ARG  A   39  .  ?        ?     1  
 39  1  1  A   39  ARG  A   40  .  ?        ?     ?  
 40  1  1  A   40  TYR  A   41  .  ?        ?     1  
 41  1  1  A   41  SER  A   42  .  ?        ?     ?  
 42  1  1  A   42  ASP  A   43  .  ?        ?     ?  
 43  1  1  A   43  ALA  A   44  .  ?        ?     ?  
 44  1  1  A   44  ASP  A   45  .  ?        ?     ?  
 45  1  1  A   45  LEU  A   46  .  ?        ?     1  
 46  1  1  A   46  ASP  A   47  .  ?        ?     ?  
 47  1  1  A   47  ARG  A   48  .  ?        ?     2  
 48  1  1  A   48  LEU  A   49  .  ?        ?     ?  
 49  1  1  A   49  GLN  A   50  .  ?        ?     ?  
 50  1  1  A   50  GLN  A   51  .  ?        ?     ?  
 51  1  1  A   51  ILE  A   52  .  ?        ?     ?  
 52  1  1  A   52  LEU  A   53  .  ?        ?     ?  
 53  1  1  A   53  PHE  A   54  .  ?        ?     ?  
 54  1  1  A   54  TYR  A   55  .  ?        ?     ?  
 55  1  1  A   55  ARG  A   56  .  ?        ?     ?  
 56  1  1  A   56  GLU  A   57  .  ?        ?     ?  
 57  1  1  A   57  LEU  A   58  .  ?        ?     ?  
 58  1  1  A   58  GLY  A   59  .  ?        ?     ?  
 59  1  1  A   59  PHE  A   60  .  ?        ?     ?  
 60  1  1  A   60  PRO  A   61  .  ?        ?     1  
 61  1  1  A   61  LEU  A   62  .  ?        ?     ?  
 62  1  1  A   62  ASP  A   63  .  ?        ?     ?  
 63  1  1  A   63  GLU  A   64  .  ?        ?     ?  
 64  1  1  A   64  VAL  A   65  .  ?        ?     1  
 65  1  1  A   65  ALA  A   66  .  ?        ?     ?  
 66  1  1  A   66  ALA  A   67  .  ?        ?     ?  
 67  1  1  A   67  LEU  A   68  .  ?        ?     ?  
 68  1  1  A   68  LEU  A   69  .  ?        ?     ?  
 69  1  1  A   69  ASP  A   70  .  ?        ?     ?  
 70  1  1  A   70  ASP  A   71  .  ?        ?     ?  
 71  1  1  A   76  ARG  A   77  .  ?        ?     ?  
 72  1  1  A   77  ALA  A   78  .  ?        ?     ?  
 73  1  1  A   78  HIS  A   79  .  ?        ?     ?  
 74  1  1  A   79  LEU  A   80  .  ?        ?     ?  
 75  1  1  A   80  ARG  A   81  .  ?        ?     2  
 76  1  1  A   81  ARG  A   82  .  ?        ?     ?  
 77  1  1  A   82  GLN  A   83  .  ?        ?     ?  
 78  1  1  A   83  HIS  A   84  .  ?        ?     ?  
 79  1  1  A   84  GLU  A   85  .  ?        ?     ?  
 80  1  1  A   85  LEU  A   86  .  ?        ?     ?  
 81  1  1  A   86  LEU  A   87  .  ?        ?     ?  
 82  1  1  A   87  SER  A   88  .  ?        ?     ?  
 83  1  1  A   88  ALA  A   89  .  ?        ?     ?  
 84  1  1  A   89  ARG  A   90  .  ?        ?     2  
 85  1  1  A   90  ILE  A   91  .  ?        ?     ?  
 86  1  1  A   91  GLY  A   92  .  ?        ?     ?  
 87  1  1  A   92  LYS  A   93  .  ?        ?     ?  
 88  1  1  A   93  LEU  A   94  .  ?        ?     2  
 89  1  1  A   94  GLN  A   95  .  ?        ?     ?  
 90  1  1  A   95  LYS  A   96  .  ?        ?     ?  
 91  1  1  A   96  MET  A   97  .  ?        ?     ?  
 92  1  1  A   97  ALA  A   98  .  ?        ?     ?  
 93  1  1  A   98  ALA  A   99  .  ?        ?     ?  
 94  1  1  A   99  ALA  A  100  .  ?        ?     ?  
 95  1  1  A  100  VAL  A  101  .  ?        ?     ?  
 96  1  1  A  101  GLU  A  102  .  ?        ?     ?  
 97  1  1  A  102  GLN  A  103  .  ?        ?     ?  
 98  1  1  A  103  ALA  A  104  .  ?        ?     ?  
 99  1  1  A  104  MET  A  105  .  ?        ?     ?  
100  1  1  A  105  GLU  A  106  .  ?        ?     ?  
101  1  2  B    4  DC   B  -11  .  ?        ?     ?  
102  1  2  B    5  DT   B  -10  .  ?        1     1  
103  1  2  B    6  DC   B   -9  .  ?        1     1  
104  1  2  B    7  DC   B   -8  .  ?        ?     1  
105  1  2  B    8  DT   B   -7  .  ?        ?     2  
106  1  2  B    9  DC   B   -6  .  ?        1     ?  
107  1  2  B   10  DA   B   -5  .  ?        1     ?  
108  1  2  B   11  DC   B   -4  .  ?        ?     ?  
109  1  2  B   12  DG   B   -3  .  ?        ?     ?  
110  1  2  B   13  DT   B   -2  .  ?        ?     ?  
111  1  2  B   14  DC   B    1  .  ?        2     ?  
112  1  2  B   15  DA   B    2  .  ?        ?     ?  
113  1  2  B   16  DC   B    3  .  ?        ?     ?  
114  1  2  B   17  DG   B    4  .  ?        ?     ?  
115  1  2  B   18  DT   B    5  .  ?        ?     ?  
116  1  2  B   19  DG   B    6  .  ?        1     ?  
117  1  2  B   20  DA   B    7  .  ?        ?     ?  
118  1  2  B   21  DG   B    8  .  ?        1     ?  
119  1  2  B   22  DG   B    9  .  ?        1     1  
120  1  2  B   23  DT   B   10  .  ?        ?     1  
121  1  2  B   24  DG   B   11  .  ?        ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.flippable_sidechain
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.OWAB
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
_pdbx_vrpt_model_instance_geometry.average_occupancy
  1    1  p             ?       ?  ?           ?   4  57.220   6  0.74   8  0.28  molprobity  1.000  
  2    2  m-85     -125.5   146.1  Favored     ?   9  56.540  13  0.43  18  0.35  molprobity  1.000  
  3    3  p         -77.7   169.7  Favored     ?   5  61.350   6  0.30   8  0.27  molprobity  1.000  
  4    4  m         -61.5   -35.7  Favored     ?   9  58.230   7  0.62  10  0.46  molprobity  1.000  
  5    5  ?         -65.1   -47.9  Favored     ?   3  56.400   4  0.16   5  0.73  molprobity  1.000  
  6    6  mt-30     -55.2   -58.2  Favored     ?   8  54.760   9  0.30  12  0.56  molprobity  1.000  
  7    7  t         -62.6   -39.0  Favored     ?   9  50.500   7  0.53  10  0.48  molprobity  1.000  
  8    8  ?         -54.7   -44.0  Favored     ?   5  51.380   5  0.41   7  0.64  molprobity  1.000  
  9    9  ?         -70.2   -39.6  Favored     ?   3  56.130   4  0.72   5  0.45  molprobity  1.000  
 10   10  m-30      -68.0   -50.1  Favored     ?   9  59.630  12  0.53  16  0.67  molprobity  1.000  
 11   11  ?         -81.8   -23.8  Favored     ?   5  50.760   5  0.45   7  0.39  molprobity  1.000  
 12   12  ?          75.7    40.4  Favored     ?   3  51.740   4  0.17   5  0.82  molprobity  1.000  
 13   13  m        -122.8   152.4  Favored     ?   9  50.610   7  0.42  10  0.66  molprobity  1.000  
 14   14  p         -66.2   150.3  Favored     ?   7  49.950   7  0.43  10  0.65  molprobity  1.000  
 15   15  t         -54.0   -41.1  Favored     ?   9  45.560   7  0.57  10  0.49  molprobity  1.000  
 16   16  tpt180    -54.6   -41.3  Favored     ?  13  53.210  11  0.49  14  0.64  molprobity  1.000  
 17   17  m         -54.9   -46.7  Favored     ?   7  53.130   7  0.20  10  0.95  molprobity  1.000  
 18   18  mt        -67.5   -28.5  Favored     ?  11  53.880   8  0.37  11  0.37  molprobity  1.000  
 19   19  m170      -72.9   -47.5  Favored     ?   7  55.910  11  0.22  15  0.25  molprobity  1.000  
 20   20  t60       -57.7   -50.9  Favored     ?   7  55.080  11  0.20  15  0.19  molprobity  1.000  
 21   21  m-30      -60.5   -31.9  Favored     ?   9  53.950  13  0.47  18  0.46  molprobity  1.000  
 22   22  t70       -66.1   -51.8  Favored     ?   4  56.570   8  0.39  11  0.58  molprobity  1.000  
 23   23  m-20      -57.1   -41.6  Favored     ?   4  56.590   8  0.75  11  0.77  molprobity  0.625  
 24   24  mt        -63.9   -30.8  Favored     ?  11  58.060   8  0.40  11  1.06  molprobity  1.000  
 25   25  ?          83.2    33.3  Favored     ?   3  53.630   4  0.20   5  0.51  molprobity  1.000  
 26   26  tp        -97.7   -30.7  Favored     ?  11  53.820   8  0.33  11  0.37  molprobity  1.000  
 27   27  tp       -153.4   107.2  Favored     ?  11  51.650   8  0.34  11  0.69  molprobity  1.000  
 28   28  t        -120.4   115.3  Favored     ?   9  50.550   7  0.33  11  0.92  molprobity  1.000  
 29   29  Cg_exo    -46.3   146.8  Favored     ?   7  57.150   8  0.39  11  0.50  molprobity  1.000  
 30   30  OUTLIER   -61.1   -37.6  Favored     ?   5  61.670   6  0.60   8  0.42  molprobity  1.000  
 31   31  OUTLIER  -159.6  -177.9  Favored     ?   6  57.160   9  1.51  12  0.64  molprobity  0.556  
 32   32  mtt180   -135.9   161.8  Favored     ?  13  54.760  11  1.01  14  0.67  molprobity  0.455  
 33   33  p         -72.6   170.4  Favored     ?   5  51.960   6  0.43   8  0.29  molprobity  1.000  
 34   34  t-80      -51.3   -26.6  Favored     ?   7  57.330  11  0.66  15  0.42  molprobity  0.500  
 35   35  ?         -81.7   -35.0  Favored     ?   5  60.090   5  0.20   7  0.22  molprobity  1.000  
 36   36  ?         117.0    10.8  Favored     ?   3  60.890   4  0.56   5  0.50  molprobity  1.000  
 37   37  m170      -80.9   137.1  Favored     ?   7  63.020  11  0.29  15  0.37  molprobity  1.000  
 38   38  mtt-85    -70.5   152.0  Favored     ?  13  57.950  11  0.38  14  0.96  molprobity  1.000  
 39   39  mmt180   -131.3   105.7  Favored     ?  13  63.060  11  0.44  14  0.83  molprobity  1.000  
 40   40  m-85      -91.8   139.1  Favored     ?   9  62.960  13  0.42  18  0.45  molprobity  1.000  
 41   41  p         -99.2   179.1  Favored     ?   5  58.430   6  0.35   8  0.52  molprobity  1.000  
 42   42  m-20      -66.2   -40.5  Favored     ?   4  57.290   8  0.36  11  0.48  molprobity  1.000  
 43   43  ?         -50.1   -45.5  Favored     ?   5  54.630   5  0.36   7  0.40  molprobity  1.000  
 44   44  m-20      -68.1   -32.4  Favored     ?   4  60.150   8  0.51  11  0.46  molprobity  1.000  
 45   45  mt        -70.2   -50.5  Favored     ?  11  54.370   8  0.39  11  0.51  molprobity  1.000  
 46   46  m-20      -47.8   -51.4  Favored     ?   4  56.350   8  0.22  11  0.63  molprobity  1.000  
 47   47  tpt180    -56.6   -47.4  Favored     ?  13  49.850  11  0.34  14  0.62  molprobity  1.000  
 48   48  tp        -59.0   -34.2  Favored     ?  11  53.930   8  0.53  11  0.79  molprobity  1.000  
 49   49  mm-40     -63.7   -43.1  Favored     ?   8  61.760   9  0.75  12  0.82  molprobity  1.000  
 50   50  mm-40     -63.0   -49.4  Favored     1   8  64.340   9  0.45  12  0.43  molprobity  1.000  
 51   51  mt        -50.8   -57.5  Favored     ?  11  57.300   8  0.49  11  0.63  molprobity  1.000  
 52   52  mt        -61.9   -29.6  Favored     ?  11  47.960   8  0.32  11  0.24  molprobity  1.000  
 53   53  t80       -63.4   -55.0  Favored     ?   9  55.030  12  0.79  16  0.51  molprobity  1.000  
 54   54  m-85      -68.0   -39.3  Favored     ?   9  55.660  13  0.47  18  0.22  molprobity  1.000  
 55   55  ttt180    -50.1   -52.8  Favored     ?  13  56.030  11  0.27  14  0.64  molprobity  1.000  
 56   56  OUTLIER   -58.8   -27.2  Favored     ?   6  61.540   9  0.69  12  0.58  molprobity  1.000  
 57   57  mt        -94.7    23.5  Favored     ?  11  58.920   8  0.35  11  0.40  molprobity  1.000  
 58   58  ?          77.1    16.6  Favored     ?   3  59.380   4  0.45   5  1.06  molprobity  1.000  
 59   59  m-85      -75.4   129.0  Favored     ?   9  60.910  12  0.45  17  0.39  molprobity  1.000  
 60   60  Cg_endo   -66.9   150.4  Favored     ?   7  54.860   8  0.40  11  0.39  molprobity  1.000  
 61   61  mt        -64.2   -24.7  Favored     ?  11  48.850   8  0.58  11  0.78  molprobity  1.000  
 62   62  p-10      -65.5   -42.3  Favored     ?   4  50.880   8  0.39  11  0.55  molprobity  1.000  
 63   63  mt-10     -71.6   -39.3  Favored     ?   6  54.970   9  0.33  12  0.54  molprobity  1.000  
 64   64  t         -59.5   -38.1  Favored     ?   9  52.670   7  0.35  10  0.48  molprobity  1.000  
 65   65  ?         -60.6   -49.9  Favored     ?   5  58.210   5  0.40   7  0.57  molprobity  1.000  
 66   66  ?         -60.6   -52.3  Favored     ?   5  57.110   5  0.20   7  0.45  molprobity  1.000  
 67   67  mt        -48.9   -52.2  Favored     ?  11  56.750   8  0.31  11  0.48  molprobity  1.000  
 68   68  mt        -71.9   -15.7  Favored     ?  11  57.920   8  0.34  11  0.61  molprobity  1.000  
 69   69  m-20     -112.0    18.4  Favored     ?   4  58.590   8  1.00  11  0.88  molprobity  1.000  
 70   70  m-20          ?       ?  ?           ?   4  54.420   7  0.89   8  0.70  molprobity  0.625  
 71   71  mtm180        ?       ?  ?           ?  12  48.980  11  0.99  14  0.64  molprobity  0.455  
 72   72  ?         -93.6    61.8  Favored     ?   5  54.680   5  0.64   7  0.64  molprobity  1.000  
 73   73  m-70      -56.1   -38.4  Favored     ?   7  58.640  11  0.25  15  0.78  molprobity  1.000  
 74   74  mt        -45.4   -38.3  Favored     ?  11  53.330   8  0.37  11  0.45  molprobity  1.000  
 75   75  OUTLIER   -53.2   -57.1  Favored     ?  13  56.580  11  0.62  14  1.85  molprobity  1.000  
 76   76  ptp180    -70.6   -32.0  Favored     ?  13  53.810  11  0.97  14  0.86  molprobity  0.636  
 77   77  mt-30     -65.7   -36.9  Favored     1   8  57.080   9  0.26  12  0.36  molprobity  1.000  
 78   78  t-80      -66.7   -45.0  Favored     ?   7  58.820  11  0.21  15  0.28  molprobity  1.000  
 79   79  mt-10     -61.6   -38.5  Favored     ?   6  57.640   9  0.96  12  0.41  molprobity  1.000  
 80   80  mt        -68.2   -48.2  Favored     ?  11  48.650   8  0.36  11  0.35  molprobity  1.000  
 81   81  mt        -61.1   -36.2  Favored     ?  11  53.000   8  0.29  11  0.30  molprobity  1.000  
 82   82  m         -70.4   -48.2  Favored     ?   5  51.080   6  0.29   8  0.58  molprobity  1.000  
 83   83  ?         -45.9   -51.3  Favored     ?   5  51.570   5  0.29   7  0.73  molprobity  1.000  
 84   84  tpt85     -72.0   -39.6  Favored     ?  13  63.110  11  0.40  14  0.78  molprobity  1.000  
 85   85  mt        -61.6   -49.3  Favored     ?  11  48.920   8  0.13  11  0.55  molprobity  1.000  
 86   86  ?         -58.3   -36.4  Favored     ?   3  50.820   4  0.41   5  0.17  molprobity  1.000  
 87   87  tttt      -64.1   -47.9  Favored     ?  13  55.840   9  0.44  11  0.46  molprobity  1.000  
 88   88  mt        -66.7   -43.1  Favored     ?  11  50.440   8  0.40  11  0.48  molprobity  1.000  
 89   89  mt-30     -52.8   -40.1  Favored     ?   8  55.180   9  0.31  12  0.26  molprobity  1.000  
 90   90  ttmm      -68.7   -41.3  Favored     ?  13  59.560   9  0.29  11  0.29  molprobity  1.000  
 91   91  mtp       -59.5   -53.0  Favored     ?   9  52.150   8  0.30  10  0.78  molprobity  1.000  
 92   92  ?         -59.3   -35.8  Favored     ?   5  54.690   5  0.46   7  0.29  molprobity  1.000  
 93   93  ?         -58.8   -45.8  Favored     ?   5  55.730   5  0.20   7  0.26  molprobity  1.000  
 94   94  ?         -60.2   -35.0  Favored     ?   5  56.420   5  0.28   7  0.30  molprobity  1.000  
 95   95  t         -64.2   -45.5  Favored     ?   9  57.440   7  0.18  10  0.29  molprobity  1.000  
 96   96  mt-10     -61.4   -36.6  Favored     ?   6  61.270   9  1.01  12  0.46  molprobity  1.000  
 97   97  mt-30     -69.5   -34.0  Favored     ?   8  59.700   9  0.68  12  0.52  molprobity  0.556  
 98   98  ?         -64.3   -39.5  Favored     ?   5  57.640   5  0.18   7  0.38  molprobity  1.000  
 99   99  mtm       -68.7   -19.3  Favored     ?   9  54.580   8  0.58  10  0.84  molprobity  1.000  
100  100  tt0           ?       ?  ?           ?   6  48.710   8  1.64   9  0.56  molprobity  0.556  
101  101  ?             ?       ?  ?           ?  11  70.210  21  0.98  32  1.41  molprobity  1.000  
102  102  ?             ?       ?  ?           ?  12  74.280  22  0.90  34  1.70  molprobity  1.000  
103  103  ?             ?       ?  ?           ?  11  58.750  21  0.63  32  1.74  molprobity  1.000  
104  104  ?             ?       ?  ?           ?  11  58.480  21  0.91  32  1.56  molprobity  1.000  
105  105  ?             ?       ?  ?           ?  12  61.560  22  0.84  34  1.55  molprobity  1.000  
106  106  ?             ?       ?  ?           ?  11  55.530  21  0.92  32  1.86  molprobity  1.000  
107  107  ?             ?       ?  ?           ?  11  59.870  24  0.72  37  1.82  molprobity  1.000  
108  108  ?             ?       ?  ?           ?  11  56.820  21  0.64  32  1.66  molprobity  1.000  
109  109  ?             ?       ?  ?           ?  11  53.540  25  0.62  39  0.73  molprobity  1.000  
110  110  ?             ?       ?  ?           ?  12  51.120  22  0.71  34  1.44  molprobity  1.000  
111  111  ?             ?       ?  ?           ?  11  53.350  21  1.07  32  2.45  molprobity  1.000  
112  112  ?             ?       ?  ?           ?  11  54.240  24  0.66  37  1.28  molprobity  1.000  
113  113  ?             ?       ?  ?           ?  11  53.140  21  0.60  32  1.43  molprobity  1.000  
114  114  ?             ?       ?  ?           ?  11  50.040  25  0.52  39  1.22  molprobity  1.000  
115  115  ?             ?       ?  ?           ?  12  54.280  22  0.76  34  1.49  molprobity  1.000  
116  116  ?             ?       ?  ?           ?  11  68.450  25  0.88  39  2.30  molprobity  1.000  
117  117  ?             ?       ?  ?           ?  11  61.100  24  0.59  37  1.10  molprobity  1.000  
118  118  ?             ?       ?  ?           ?  11  48.630  25  0.72  39  1.79  molprobity  1.000  
119  119  ?             ?       ?  ?           ?  11  52.250  25  0.57  39  1.87  molprobity  1.000  
120  120  ?             ?       ?  ?           ?  12  59.570  22  0.75  34  1.60  molprobity  1.000  
121  121  ?             ?       ?  ?           ?  12  73.370  24  0.88  35  1.46  molprobity  1.000  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1    4  HB       1  0.41  2.02  
 2    7  HG22     2  0.54  1.90  
 3   15  HG13     1  0.41  2.02  
 4   20  NE2      3  0.61  2.14  
 5   20  CD2      4  0.56  2.41  
 6   24  HD11     3  0.61  2.14  
 7   24  HD11     4  0.56  2.41  
 8   27  HD13     5  0.66  1.78  
 9   27  CD1      6  0.45  2.44  
10   29  HG3      7  0.42  2.55  
11   38  NH2      8  0.49  2.45  
12   40  CZ       7  0.42  2.55  
13   45  HD21     2  0.54  1.90  
14   47  HG2      5  0.66  1.78  
15   47  HG2      6  0.45  2.44  
16   60  O        9  0.43  2.17  
17   64  HG23     9  0.43  2.17  
18   75  HH11    10  0.41  2.34  
19   75  CG      10  0.41  2.34  
20   84  HH12    11  0.55  1.70  
21   84  NH1     12  0.52  2.24  
22   88  HD21    11  0.55  1.70  
23   88  HD21    12  0.52  2.24  
24  102  C6      13  0.41  3.08  
25  103  C5      13  0.41  3.08  
26  104  "H2'"   14  0.41  2.55  
27  105  OP2      8  0.49  2.45  
28  105  C6      14  0.41  2.55  
29  119  "H2'"   15  0.51  1.91  
30  120  H72     15  0.51  1.91  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
1  102  "O4'"  "C1'"  N1     111.568  108.000  0.700   5.10  ?     
2  103  "O4'"  "C1'"  N1     111.741  108.000  0.700   5.34  ?     
3  106  "O4'"  "C1'"  N1     112.435  108.000  0.700   6.33  ?     
4  107  "O4'"  "C1'"  N9     111.813  108.000  0.700   5.45  ?     
5  111  P      "O3'"  "C3'"  125.965  119.700  1.200   5.22  Y     
6  111  "O4'"  "C1'"  "C2'"  100.435  105.900  0.800  -6.83  ?     
7  116  "O4'"  "C1'"  N9     116.397  108.000  0.700  12.00  ?     
8  118  P      "O3'"  "C3'"  126.590  119.700  1.200   5.74  Y     
9  119  "O4'"  "C1'"  N9     114.632  108.000  0.700   9.47  ?     
#
loop_
_pdbx_vrpt_model_instance_density.ordinal
_pdbx_vrpt_model_instance_density.instance_id
_pdbx_vrpt_model_instance_density.natoms_eds
_pdbx_vrpt_model_instance_density.RSRCC
_pdbx_vrpt_model_instance_density.RSR
_pdbx_vrpt_model_instance_density.RSRZ
  1    1   6  0.927  0.200   0.299  
  2    2  12  0.965  0.156  -0.556  
  3    3   6  0.945  0.156  -0.288  
  4    4   7  0.978  0.229   0.319  
  5    5   4  0.951  0.163  -0.122  
  6    6   9  0.937  0.148  -0.752  
  7    7   7  0.974  0.212   0.109  
  8    8   5  0.981  0.170  -0.170  
  9    9   4  0.925  0.162  -0.133  
 10   10  11  0.936  0.182  -0.321  
 11   11   5  0.962  0.216   0.400  
 12   12   4  0.973  0.187   0.159  
 13   13   7  0.977  0.241   0.466  
 14   14   7  0.980  0.212   0.385  
 15   15   7  0.977  0.231   0.343  
 16   16  11  0.946  0.228   0.020  
 17   17   7  0.974  0.252   0.929  
 18   18   8  0.969  0.247   0.387  
 19   19  10  0.948  0.200   0.131  
 20   20  10  0.916  0.205   0.196  
 21   21  12  0.976  0.212   0.176  
 22   22   8  0.960  0.191  -0.015  
 23   23   5  0.941  0.137  -0.686  
 24   24   8  0.922  0.243   0.380  
 25   25   4  0.970  0.128  -0.532  
 26   26   8  0.963  0.184  -0.377  
 27   27   8  0.973  0.199  -0.195  
 28   28   7  0.980  0.208   0.060  
 29   29   7  0.948  0.214   0.388  
 30   30   6  0.880  0.201   0.312  
 31   31   5  0.917  0.165  -0.655  
 32   32   5  0.955  0.143  -0.881  
 33   33   6  0.912  0.163  -0.195  
 34   34   5  0.910  0.200   0.131  
 35   35   5  0.928  0.249   0.808  
 36   36   4  0.927  0.147  -0.309  
 37   37  10  0.907  0.219   0.379  
 38   38  11  0.934  0.238   0.126  
 39   39  11  0.904  0.225  -0.012  
 40   40  12  0.958  0.194  -0.059  
 41   41   6  0.970  0.181   0.045  
 42   42   8  0.911  0.120  -0.897  
 43   43   5  0.984  0.124  -0.739  
 44   44   8  0.969  0.150  -0.524  
 45   45   8  0.960  0.147  -0.826  
 46   46   8  0.926  0.144  -0.599  
 47   47  11  0.961  0.204  -0.234  
 48   48   8  0.961  0.220   0.059  
 49   49   9  0.911  0.218   0.082  
 50   50   9  0.925  0.254   0.511  
 51   51   8  0.985  0.188  -0.294  
 52   52   8  0.972  0.217   0.023  
 53   53  11  0.962  0.232   0.278  
 54   54  12  0.975  0.254   0.725  
 55   55  11  0.950  0.217  -0.097  
 56   56   9  0.938  0.177  -0.523  
 57   57   8  0.954  0.230   0.181  
 58   58   4  0.951  0.099  -0.871  
 59   59  11  0.947  0.217   0.098  
 60   60   7  0.946  0.180  -0.047  
 61   61   8  0.968  0.177  -0.462  
 62   62   8  0.933  0.106  -1.071  
 63   63   9  0.942  0.130  -1.038  
 64   64   7  0.945  0.142  -0.752  
 65   65   5  0.950  0.176  -0.095  
 66   66   5  0.982  0.249   0.808  
 67   67   8  0.945  0.239   0.290  
 68   68   8  0.936  0.205  -0.123  
 69   69   8  0.702  0.256   0.793  
 70   70   5  0.536  0.226   0.420  
 71   71   5  0.798  0.251   0.264  
 72   72   5  0.888  0.158  -0.318  
 73   73  10  0.897  0.257   0.875  
 74   74   8  0.950  0.305   1.091  
 75   75  11  0.917  0.222  -0.043  
 76   76   7  0.955  0.189  -0.393  
 77   77   9  0.941  0.206  -0.061  
 78   78  10  0.957  0.138  -0.679  
 79   79   9  0.946  0.297   0.793  
 80   80   8  0.970  0.246   0.375  
 81   81   8  0.935  0.186  -0.353  
 82   82   6  0.968  0.137  -0.542  
 83   83   5  0.957  0.165  -0.231  
 84   84  11  0.911  0.206  -0.213  
 85   85   8  0.968  0.196  -0.196  
 86   86   4  0.982  0.229   0.651  
 87   87   9  0.960  0.153  -0.910  
 88   88   8  0.989  0.192  -0.280  
 89   89   9  0.959  0.189  -0.263  
 90   90   9  0.936  0.208  -0.357  
 91   91   8  0.934  0.188  -0.035  
 92   92   5  0.964  0.208   0.301  
 93   93   5  0.938  0.242   0.722  
 94   94   5  0.938  0.235   0.635  
 95   95   7  0.932  0.230   0.331  
 96   96   9  0.911  0.204  -0.227  
 97   97   5  0.959  0.308   1.155  
 98   98   5  0.943  0.219   0.437  
 99   99   8  0.911  0.187  -0.048  
100  100   5  0.864  0.172  -0.578  
101  101  19  0.733  0.318   1.721  
102  102  20  0.884  0.220   0.351  
103  103  19  0.954  0.186  -0.028  
104  104  19  0.956  0.203   0.197  
105  105  20  0.940  0.226   0.426  
106  106  19  0.914  0.196   0.105  
107  107  21  0.862  0.221   0.552  
108  108  19  0.848  0.224   0.475  
109  109  22  0.863  0.206   0.359  
110  110  20  0.916  0.191  -0.014  
111  111  19  0.944  0.170  -0.240  
112  112  21  0.963  0.195   0.179  
113  113  19  0.974  0.236   0.634  
114  114  22  0.951  0.195   0.196  
115  115  20  0.946  0.195   0.036  
116  116  22  0.894  0.188   0.092  
117  117  21  0.911  0.141  -0.595  
118  118  22  0.854  0.217   0.521  
119  119  22  0.870  0.228   0.684  
120  120  20  0.883  0.219   0.338  
121  121  22  0.702  0.258   1.129  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  eds          2.36                                                                  Y  
3  dcc          '"2.27  (2023-04-10)"'                                                Y  
4  xtriage      1.13                                                                  Y  
5  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
