data_2GPX
# 
_entry.id   2GPX 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.377 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   2GPX         pdb_00002gpx 10.2210/pdb2gpx/pdb 
NDB   AD0062       ?            ?                   
RCSB  RCSB037409   ?            ?                   
WWPDB D_1000037409 ?            ?                   
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 1Z7I 
;2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC
;
unspecified 
PDB 2DLJ 
;2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC
;
unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        2GPX 
_pdbx_database_status.recvd_initial_deposition_date   2006-04-18 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Jiang, J.' 1 
'Huang, Z.' 2 
# 
_citation.id                        primary 
_citation.title                     'Selenium derivatization of nucleic acids for crystallography.' 
_citation.journal_abbrev            'Nucleic Acids Res.' 
_citation.journal_volume            35 
_citation.page_first                477 
_citation.page_last                 485 
_citation.year                      2007 
_citation.journal_id_ASTM           NARHAD 
_citation.country                   UK 
_citation.journal_id_ISSN           0305-1048 
_citation.journal_id_CSD            0389 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   17169989 
_citation.pdbx_database_id_DOI      10.1093/nar/gkl1070 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Jiang, J.'    1 ? 
primary 'Sheng, J.'    2 ? 
primary 'Carrasco, N.' 3 ? 
primary 'Huang, Z.'    4 ? 
# 
_cell.entry_id           2GPX 
_cell.length_a           42.252 
_cell.length_b           42.252 
_cell.length_c           24.133 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         2GPX 
_symmetry.space_group_name_H-M             'P 43 21 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                96 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3'" 2570.447 1  ? ? ? ? 
2 non-polymer syn 'BARIUM ION'                               137.327  1  ? ? ? ? 
3 water       nat water                                      18.015   31 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(UMS)(DG)(BRU)(DA)(DC)(DA)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GUGUACAC 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 DG  n 
1 2 UMS n 
1 3 DG  n 
1 4 BRU n 
1 5 DA  n 
1 6 DC  n 
1 7 DA  n 
1 8 DC  n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'Solid Phase Synthesis via Phosphoramidite Chemistry' 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    2GPX 
_struct_ref.pdbx_db_accession          2GPX 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              2GPX 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 8 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             2GPX 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  8 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       8 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
BA  non-polymer   . 'BARIUM ION'                                    ? 'Ba 2'               137.327 
BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE"      ? 'C9 H12 Br N2 O8 P'  387.078 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"            ? 'C10 H14 N5 O6 P'    331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"             ? 'C9 H14 N3 O7 P'     307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"            ? 'C10 H14 N5 O7 P'    347.221 
HOH non-polymer   . WATER                                           ? 'H2 O'               18.015  
UMS 'DNA linking' n "2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE" ? 'C10 H15 N2 O8 P Se' 401.168 
# 
_exptl.entry_id          2GPX 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.02 
_exptl_crystal.density_percent_sol   39.10 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.0 
_exptl_crystal_grow.pdbx_details    
;10% v/v MPD 40mM Sodium Cacodylate, 12mM Spermine tetra-HCI, 80 mM sodium Chloride, 20 mM Barium Chloride, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
;
_exptl_crystal_grow.pdbx_pH_range   . 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 210' 
_diffrn_detector.pdbx_collection_date   2006-03-26 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             MAD 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
loop_
_diffrn_radiation_wavelength.id 
_diffrn_radiation_wavelength.wavelength 
_diffrn_radiation_wavelength.wt 
1 1.1    1.0 
2 0.9797 1.0 
3 0.9196 1.0 
4 0.94   1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'NSLS BEAMLINE X12C' 
_diffrn_source.pdbx_synchrotron_site       NSLS 
_diffrn_source.pdbx_synchrotron_beamline   X12C 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        '1.1, 0.9797, 0.9196, 0.94' 
# 
_reflns.entry_id                     2GPX 
_reflns.observed_criterion_sigma_I   -3 
_reflns.observed_criterion_sigma_F   0 
_reflns.d_resolution_low             18.9 
_reflns.d_resolution_high            1.6 
_reflns.number_obs                   3161 
_reflns.number_all                   3161 
_reflns.percent_possible_obs         99.7 
_reflns.pdbx_Rmerge_I_obs            0.084 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        7.7 
_reflns.B_iso_Wilson_estimate        23.6 
_reflns.pdbx_redundancy              12.4 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.6 
_reflns_shell.d_res_low              1.66 
_reflns_shell.percent_possible_all   99.3 
_reflns_shell.Rmerge_I_obs           0.499 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    2.5 
_reflns_shell.pdbx_redundancy        9.0 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      297 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 2GPX 
_refine.ls_number_reflns_obs                     2909 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.0 
_refine.pdbx_data_cutoff_high_absF               421128.02 
_refine.pdbx_data_cutoff_low_absF                0.000000 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             18.90 
_refine.ls_d_res_high                            1.60 
_refine.ls_percent_reflns_obs                    92.4 
_refine.ls_R_factor_obs                          0.187 
_refine.ls_R_factor_all                          0.195 
_refine.ls_R_factor_R_work                       0.187 
_refine.ls_R_factor_R_free                       0.238 
_refine.ls_R_factor_R_free_error                 0.014 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 9.9 
_refine.ls_number_reflns_R_free                  289 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               25.9 
_refine.aniso_B[1][1]                            0.31 
_refine.aniso_B[2][2]                            0.31 
_refine.aniso_B[3][3]                            -0.62 
_refine.aniso_B[1][2]                            0.00 
_refine.aniso_B[1][3]                            0.00 
_refine.aniso_B[2][3]                            0.00 
_refine.solvent_model_details                    'FLAT MODEL' 
_refine.solvent_model_param_ksol                 0.34 
_refine.solvent_model_param_bsol                 40.0464 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  ? 
_refine.pdbx_starting_model                      'PDB ENTRY 1Z7I, 2DJL' 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             RESTRAINED 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD FUNCTION' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        2GPX 
_refine_analyze.Luzzati_coordinate_error_obs    0.16 
_refine_analyze.Luzzati_sigma_a_obs             0.12 
_refine_analyze.Luzzati_d_res_low_obs           5.00 
_refine_analyze.Luzzati_coordinate_error_free   0.22 
_refine_analyze.Luzzati_sigma_a_free            0.12 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_hydrogen          ? 
_refine_analyze.occupancy_sum_non_hydrogen      ? 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   162 
_refine_hist.pdbx_number_atoms_ligand         1 
_refine_hist.number_atoms_solvent             31 
_refine_hist.number_atoms_total               194 
_refine_hist.d_res_high                       1.60 
_refine_hist.d_res_low                        18.90 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
c_bond_d           0.010 ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg        1.8   ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d 30.5  ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d 2.09  ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   6 
_refine_ls_shell.d_res_high                       1.60 
_refine_ls_shell.d_res_low                        1.70 
_refine_ls_shell.number_reflns_R_work             333 
_refine_ls_shell.R_factor_R_work                  0.213 
_refine_ls_shell.percent_reflns_obs               75.0 
_refine_ls_shell.R_factor_R_free                  0.244 
_refine_ls_shell.R_factor_R_free_error            0.037 
_refine_ls_shell.percent_reflns_R_free            11.7 
_refine_ls_shell.number_reflns_R_free             44 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.number_reflns_obs                333 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
loop_
_pdbx_xplor_file.serial_no 
_pdbx_xplor_file.param_file 
_pdbx_xplor_file.topol_file 
_pdbx_xplor_file.pdbx_refine_id 
1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 
2 water_rep.param   dna-rna.top 'X-RAY DIFFRACTION' 
3 ion.param         water.top   'X-RAY DIFFRACTION' 
4 dna-rna_ums.par   ion.top     'X-RAY DIFFRACTION' 
5 ?                 ums.top     'X-RAY DIFFRACTION' 
# 
_struct.entry_id                  2GPX 
_struct.title                     
;2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        2GPX 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            
;2'-Methylseleno-uridine, Se-DNA, Se-Br-DNA, Selenium Derivatization, DNA
;
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DG  1 "O3'" ? ? ? 1_555 A UMS 2 P  ? ? A DG  1   A UMS 2   1_555 ? ? ? ? ? ? ?            1.625 ? ? 
covale2  covale both ? A UMS 2 "O3'" ? ? ? 1_555 A DG  3 P  ? ? A UMS 2   A DG  3   1_555 ? ? ? ? ? ? ?            1.614 ? ? 
covale3  covale both ? A DG  3 "O3'" ? ? ? 1_555 A BRU 4 P  ? ? A DG  3   A BRU 4   1_555 ? ? ? ? ? ? ?            1.602 ? ? 
covale4  covale both ? A BRU 4 "O3'" ? ? ? 1_555 A DA  5 P  ? ? A BRU 4   A DA  5   1_555 ? ? ? ? ? ? ?            1.605 ? ? 
metalc1  metalc ?    ? A UMS 2 O4    ? ? ? 1_555 B BA  . BA ? ? A UMS 2   A BA  101 1_555 ? ? ? ? ? ? ?            2.772 ? ? 
metalc2  metalc ?    ? A DG  3 O6    ? ? ? 1_555 B BA  . BA ? ? A DG  3   A BA  101 1_555 ? ? ? ? ? ? ?            2.911 ? ? 
metalc3  metalc ?    ? B BA  . BA    ? ? ? 1_555 C HOH . O  ? ? A BA  101 A HOH 105 1_555 ? ? ? ? ? ? ?            2.956 ? ? 
metalc4  metalc ?    ? B BA  . BA    ? ? ? 1_555 C HOH . O  ? ? A BA  101 A HOH 111 1_555 ? ? ? ? ? ? ?            2.716 ? ? 
metalc5  metalc ?    ? B BA  . BA    ? ? ? 1_555 C HOH . O  ? ? A BA  101 A HOH 116 7_555 ? ? ? ? ? ? ?            2.851 ? ? 
hydrog1  hydrog ?    ? A DG  1 N1    ? ? ? 1_555 A DC  8 N3 ? ? A DG  1   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DG  1 N2    ? ? ? 1_555 A DC  8 O2 ? ? A DG  1   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DG  1 O6    ? ? ? 1_555 A DC  8 N4 ? ? A DG  1   A DC  8   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A UMS 2 N3    ? ? ? 1_555 A DA  7 N1 ? ? A UMS 2   A DA  7   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A UMS 2 O4    ? ? ? 1_555 A DA  7 N6 ? ? A UMS 2   A DA  7   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DG  3 N1    ? ? ? 1_555 A DC  6 N3 ? ? A DG  3   A DC  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DG  3 N2    ? ? ? 1_555 A DC  6 O2 ? ? A DG  3   A DC  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DG  3 O6    ? ? ? 1_555 A DC  6 N4 ? ? A DG  3   A DC  6   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A BRU 4 N3    ? ? ? 1_555 A DA  5 N1 ? ? A BRU 4   A DA  5   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A BRU 4 O4    ? ? ? 1_555 A DA  5 N6 ? ? A BRU 4   A DA  5   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DA  5 N1    ? ? ? 1_555 A BRU 4 N3 ? ? A DA  5   A BRU 4   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DA  5 N6    ? ? ? 1_555 A BRU 4 O4 ? ? A DA  5   A BRU 4   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DC  6 N3    ? ? ? 1_555 A DG  3 N1 ? ? A DC  6   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A DC  6 N4    ? ? ? 1_555 A DG  3 O6 ? ? A DC  6   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A DC  6 O2    ? ? ? 1_555 A DG  3 N2 ? ? A DC  6   A DG  3   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DA  7 N1    ? ? ? 1_555 A UMS 2 N3 ? ? A DA  7   A UMS 2   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DA  7 N6    ? ? ? 1_555 A UMS 2 O4 ? ? A DA  7   A UMS 2   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  8 N3    ? ? ? 1_555 A DG  1 N1 ? ? A DC  8   A DG  1   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DC  8 N4    ? ? ? 1_555 A DG  1 O6 ? ? A DC  8   A DG  1   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DC  8 O2    ? ? ? 1_555 A DG  1 N2 ? ? A DC  8   A DG  1   7_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
_struct_site.id                   AC1 
_struct_site.pdbx_evidence_code   Software 
_struct_site.pdbx_auth_asym_id    A 
_struct_site.pdbx_auth_comp_id    BA 
_struct_site.pdbx_auth_seq_id     101 
_struct_site.pdbx_auth_ins_code   ? 
_struct_site.pdbx_num_residues    5 
_struct_site.details              'BINDING SITE FOR RESIDUE BA A 101' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 5 UMS A 2 ? UMS A 2   . ? 1_555 ? 
2 AC1 5 DG  A 3 ? DG  A 3   . ? 1_555 ? 
3 AC1 5 HOH C . ? HOH A 105 . ? 1_555 ? 
4 AC1 5 HOH C . ? HOH A 111 . ? 1_555 ? 
5 AC1 5 HOH C . ? HOH A 116 . ? 7_555 ? 
# 
_database_PDB_matrix.entry_id          2GPX 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    2GPX 
_atom_sites.fract_transf_matrix[1][1]   0.023668 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.023668 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.041437 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
BA 
BR 
C  
N  
O  
P  
SE 
# 
loop_
_atom_site.group_PDB 
_atom_site.id 
_atom_site.type_symbol 
_atom_site.label_atom_id 
_atom_site.label_alt_id 
_atom_site.label_comp_id 
_atom_site.label_asym_id 
_atom_site.label_entity_id 
_atom_site.label_seq_id 
_atom_site.pdbx_PDB_ins_code 
_atom_site.Cartn_x 
_atom_site.Cartn_y 
_atom_site.Cartn_z 
_atom_site.occupancy 
_atom_site.B_iso_or_equiv 
_atom_site.pdbx_formal_charge 
_atom_site.auth_seq_id 
_atom_site.auth_comp_id 
_atom_site.auth_asym_id 
_atom_site.auth_atom_id 
_atom_site.pdbx_PDB_model_num 
ATOM   1   O  "O5'"  . DG  A 1 1 ? 7.241  -1.943 -5.277 1.00 22.07 ? 1   DG  A "O5'"  1 
ATOM   2   C  "C5'"  . DG  A 1 1 ? 7.209  -3.358 -5.126 1.00 22.25 ? 1   DG  A "C5'"  1 
ATOM   3   C  "C4'"  . DG  A 1 1 ? 8.343  -4.015 -4.373 1.00 20.77 ? 1   DG  A "C4'"  1 
ATOM   4   O  "O4'"  . DG  A 1 1 ? 9.564  -3.842 -5.152 1.00 20.24 ? 1   DG  A "O4'"  1 
ATOM   5   C  "C3'"  . DG  A 1 1 ? 8.653  -3.389 -3.014 1.00 22.05 ? 1   DG  A "C3'"  1 
ATOM   6   O  "O3'"  . DG  A 1 1 ? 7.970  -3.967 -1.906 1.00 22.28 ? 1   DG  A "O3'"  1 
ATOM   7   C  "C2'"  . DG  A 1 1 ? 10.159 -3.533 -2.874 1.00 20.94 ? 1   DG  A "C2'"  1 
ATOM   8   C  "C1'"  . DG  A 1 1 ? 10.695 -3.676 -4.289 1.00 21.25 ? 1   DG  A "C1'"  1 
ATOM   9   N  N9     . DG  A 1 1 ? 11.104 -2.307 -4.636 1.00 21.16 ? 1   DG  A N9     1 
ATOM   10  C  C8     . DG  A 1 1 ? 10.381 -1.336 -5.297 1.00 20.25 ? 1   DG  A C8     1 
ATOM   11  N  N7     . DG  A 1 1 ? 11.018 -0.193 -5.390 1.00 20.80 ? 1   DG  A N7     1 
ATOM   12  C  C5     . DG  A 1 1 ? 12.239 -0.423 -4.761 1.00 20.56 ? 1   DG  A C5     1 
ATOM   13  C  C6     . DG  A 1 1 ? 13.394 0.463  -4.531 1.00 20.40 ? 1   DG  A C6     1 
ATOM   14  O  O6     . DG  A 1 1 ? 13.543 1.642  -4.856 1.00 19.76 ? 1   DG  A O6     1 
ATOM   15  N  N1     . DG  A 1 1 ? 14.415 -0.206 -3.851 1.00 21.34 ? 1   DG  A N1     1 
ATOM   16  C  C2     . DG  A 1 1 ? 14.371 -1.522 -3.455 1.00 21.53 ? 1   DG  A C2     1 
ATOM   17  N  N2     . DG  A 1 1 ? 15.495 -2.013 -2.868 1.00 24.45 ? 1   DG  A N2     1 
ATOM   18  N  N3     . DG  A 1 1 ? 13.330 -2.320 -3.632 1.00 20.96 ? 1   DG  A N3     1 
ATOM   19  C  C4     . DG  A 1 1 ? 12.313 -1.719 -4.293 1.00 20.64 ? 1   DG  A C4     1 
HETATM 20  P  P      . UMS A 1 2 ? 7.445  -2.997 -0.712 1.00 23.22 ? 2   UMS A P      1 
HETATM 21  O  OP1    . UMS A 1 2 ? 6.561  -3.828 0.159  1.00 24.36 ? 2   UMS A OP1    1 
HETATM 22  O  OP2    . UMS A 1 2 ? 6.934  -1.725 -1.279 1.00 23.21 ? 2   UMS A OP2    1 
HETATM 23  O  "O5'"  . UMS A 1 2 ? 8.763  -2.661 0.105  1.00 23.54 ? 2   UMS A "O5'"  1 
HETATM 24  C  "C5'"  . UMS A 1 2 ? 9.532  -3.725 0.639  1.00 23.47 ? 2   UMS A "C5'"  1 
HETATM 25  C  "C4'"  . UMS A 1 2 ? 10.832 -3.232 1.228  1.00 24.18 ? 2   UMS A "C4'"  1 
HETATM 26  O  "O4'"  . UMS A 1 2 ? 11.699 -2.802 0.149  1.00 22.87 ? 2   UMS A "O4'"  1 
HETATM 27  C  "C3'"  . UMS A 1 2 ? 10.763 -2.030 2.162  1.00 25.53 ? 2   UMS A "C3'"  1 
HETATM 28  O  "O3'"  . UMS A 1 2 ? 10.455 -2.391 3.502  1.00 28.21 ? 2   UMS A "O3'"  1 
HETATM 29  C  "C2'"  . UMS A 1 2 ? 12.171 -1.459 2.053  1.00 25.39 ? 2   UMS A "C2'"  1 
HETATM 30  SE "SE2'" . UMS A 1 2 ? 13.487 -2.690 3.163  0.79 30.49 ? 2   UMS A "SE2'" 1 
HETATM 31  C  "C1'"  . UMS A 1 2 ? 12.591 -1.786 0.633  1.00 24.28 ? 2   UMS A "C1'"  1 
HETATM 32  C  "CA'"  . UMS A 1 2 ? 15.109 -1.624 3.066  1.00 30.22 ? 2   UMS A "CA'"  1 
HETATM 33  N  N1     . UMS A 1 2 ? 12.267 -0.644 -0.295 1.00 22.58 ? 2   UMS A N1     1 
HETATM 34  C  C2     . UMS A 1 2 ? 13.272 0.313  -0.480 1.00 22.23 ? 2   UMS A C2     1 
HETATM 35  O  O2     . UMS A 1 2 ? 14.374 0.226  0.044  1.00 23.76 ? 2   UMS A O2     1 
HETATM 36  N  N3     . UMS A 1 2 ? 12.950 1.366  -1.297 1.00 20.86 ? 2   UMS A N3     1 
HETATM 37  C  C4     . UMS A 1 2 ? 11.759 1.588  -1.948 1.00 19.33 ? 2   UMS A C4     1 
HETATM 38  O  O4     . UMS A 1 2 ? 11.621 2.581  -2.629 1.00 20.80 ? 2   UMS A O4     1 
HETATM 39  C  C5     . UMS A 1 2 ? 10.710 0.538  -1.741 1.00 19.58 ? 2   UMS A C5     1 
HETATM 40  C  C6     . UMS A 1 2 ? 11.036 -0.527 -0.915 1.00 20.38 ? 2   UMS A C6     1 
ATOM   41  P  P      . DG  A 1 3 ? 9.647  -1.345 4.429  1.00 28.99 ? 3   DG  A P      1 
ATOM   42  O  OP1    . DG  A 1 3 ? 9.056  -2.148 5.528  1.00 31.99 ? 3   DG  A OP1    1 
ATOM   43  O  OP2    . DG  A 1 3 ? 8.783  -0.460 3.615  1.00 28.97 ? 3   DG  A OP2    1 
ATOM   44  O  "O5'"  . DG  A 1 3 ? 10.830 -0.489 5.019  1.00 29.54 ? 3   DG  A "O5'"  1 
ATOM   45  C  "C5'"  . DG  A 1 3 ? 10.846 0.905  4.898  1.00 27.34 ? 3   DG  A "C5'"  1 
ATOM   46  C  "C4'"  . DG  A 1 3 ? 12.270 1.376  4.954  1.00 25.62 ? 3   DG  A "C4'"  1 
ATOM   47  O  "O4'"  . DG  A 1 3 ? 12.782 1.279  3.598  1.00 25.58 ? 3   DG  A "O4'"  1 
ATOM   48  C  "C3'"  . DG  A 1 3 ? 12.371 2.844  5.334  1.00 24.78 ? 3   DG  A "C3'"  1 
ATOM   49  O  "O3'"  . DG  A 1 3 ? 12.768 3.042  6.677  1.00 24.48 ? 3   DG  A "O3'"  1 
ATOM   50  C  "C2'"  . DG  A 1 3 ? 13.406 3.429  4.396  1.00 24.67 ? 3   DG  A "C2'"  1 
ATOM   51  C  "C1'"  . DG  A 1 3 ? 13.568 2.412  3.273  1.00 24.10 ? 3   DG  A "C1'"  1 
ATOM   52  N  N9     . DG  A 1 3 ? 12.785 2.968  2.161  1.00 22.36 ? 3   DG  A N9     1 
ATOM   53  C  C8     . DG  A 1 3 ? 11.563 2.578  1.651  1.00 20.58 ? 3   DG  A C8     1 
ATOM   54  N  N7     . DG  A 1 3 ? 11.172 3.319  0.643  1.00 21.53 ? 3   DG  A N7     1 
ATOM   55  C  C5     . DG  A 1 3 ? 12.201 4.242  0.474  1.00 20.51 ? 3   DG  A C5     1 
ATOM   56  C  C6     . DG  A 1 3 ? 12.386 5.340  -0.505 1.00 19.54 ? 3   DG  A C6     1 
ATOM   57  O  O6     . DG  A 1 3 ? 11.662 5.667  -1.459 1.00 19.07 ? 3   DG  A O6     1 
ATOM   58  N  N1     . DG  A 1 3 ? 13.566 6.045  -0.256 1.00 18.94 ? 3   DG  A N1     1 
ATOM   59  C  C2     . DG  A 1 3 ? 14.462 5.760  0.753  1.00 18.80 ? 3   DG  A C2     1 
ATOM   60  N  N2     . DG  A 1 3 ? 15.523 6.577  0.865  1.00 18.70 ? 3   DG  A N2     1 
ATOM   61  N  N3     . DG  A 1 3 ? 14.326 4.755  1.604  1.00 19.28 ? 3   DG  A N3     1 
ATOM   62  C  C4     . DG  A 1 3 ? 13.187 4.050  1.413  1.00 21.13 ? 3   DG  A C4     1 
HETATM 63  N  N1     . BRU A 1 4 ? 13.696 7.816  3.720  1.00 21.01 ? 4   BRU A N1     1 
HETATM 64  C  C2     . BRU A 1 4 ? 13.608 8.688  2.630  1.00 20.33 ? 4   BRU A C2     1 
HETATM 65  N  N3     . BRU A 1 4 ? 12.516 8.500  1.785  1.00 18.25 ? 4   BRU A N3     1 
HETATM 66  C  C4     . BRU A 1 4 ? 11.481 7.572  1.924  1.00 19.76 ? 4   BRU A C4     1 
HETATM 67  C  C5     . BRU A 1 4 ? 11.591 6.658  3.140  1.00 20.55 ? 4   BRU A C5     1 
HETATM 68  C  C6     . BRU A 1 4 ? 12.727 6.834  3.950  1.00 21.04 ? 4   BRU A C6     1 
HETATM 69  O  O2     . BRU A 1 4 ? 14.423 9.588  2.447  1.00 19.76 ? 4   BRU A O2     1 
HETATM 70  O  O4     . BRU A 1 4 ? 10.569 7.533  1.094  1.00 20.31 ? 4   BRU A O4     1 
HETATM 71  BR BR     . BRU A 1 4 ? 10.368 5.513  3.454  0.86 23.77 ? 4   BRU A BR     1 
HETATM 72  C  "C1'"  . BRU A 1 4 ? 14.873 8.052  4.638  1.00 23.33 ? 4   BRU A "C1'"  1 
HETATM 73  C  "C2'"  . BRU A 1 4 ? 14.374 8.883  5.808  1.00 23.96 ? 4   BRU A "C2'"  1 
HETATM 74  C  "C3'"  . BRU A 1 4 ? 14.342 7.957  7.007  1.00 24.15 ? 4   BRU A "C3'"  1 
HETATM 75  C  "C4'"  . BRU A 1 4 ? 15.132 6.721  6.576  1.00 24.17 ? 4   BRU A "C4'"  1 
HETATM 76  O  "O3'"  . BRU A 1 4 ? 14.877 8.651  8.118  1.00 23.78 ? 4   BRU A "O3'"  1 
HETATM 77  O  "O4'"  . BRU A 1 4 ? 15.112 6.727  5.119  1.00 24.09 ? 4   BRU A "O4'"  1 
HETATM 78  C  "C5'"  . BRU A 1 4 ? 14.506 5.431  7.053  1.00 24.78 ? 4   BRU A "C5'"  1 
HETATM 79  O  "O5'"  . BRU A 1 4 ? 13.089 5.505  6.959  1.00 23.62 ? 4   BRU A "O5'"  1 
HETATM 80  P  P      . BRU A 1 4 ? 12.172 4.304  7.463  1.00 23.58 ? 4   BRU A P      1 
HETATM 81  O  OP1    . BRU A 1 4 ? 12.418 4.058  8.903  1.00 24.83 ? 4   BRU A OP1    1 
HETATM 82  O  OP2    . BRU A 1 4 ? 10.807 4.619  6.993  1.00 24.12 ? 4   BRU A OP2    1 
ATOM   83  P  P      . DA  A 1 5 ? 13.976 9.779  8.819  1.00 24.63 ? 5   DA  A P      1 
ATOM   84  O  OP1    . DA  A 1 5 ? 14.475 9.918  10.224 1.00 25.82 ? 5   DA  A OP1    1 
ATOM   85  O  OP2    . DA  A 1 5 ? 12.530 9.545  8.588  1.00 26.38 ? 5   DA  A OP2    1 
ATOM   86  O  "O5'"  . DA  A 1 5 ? 14.405 11.085 8.030  1.00 23.79 ? 5   DA  A "O5'"  1 
ATOM   87  C  "C5'"  . DA  A 1 5 ? 13.460 12.024 7.606  1.00 22.87 ? 5   DA  A "C5'"  1 
ATOM   88  C  "C4'"  . DA  A 1 5 ? 14.103 12.932 6.590  1.00 22.57 ? 5   DA  A "C4'"  1 
ATOM   89  O  "O4'"  . DA  A 1 5 ? 14.264 12.147 5.372  1.00 21.09 ? 5   DA  A "O4'"  1 
ATOM   90  C  "C3'"  . DA  A 1 5 ? 13.220 14.109 6.214  1.00 22.73 ? 5   DA  A "C3'"  1 
ATOM   91  O  "O3'"  . DA  A 1 5 ? 13.579 15.302 6.879  1.00 24.16 ? 5   DA  A "O3'"  1 
ATOM   92  C  "C2'"  . DA  A 1 5 ? 13.378 14.245 4.711  1.00 21.45 ? 5   DA  A "C2'"  1 
ATOM   93  C  "C1'"  . DA  A 1 5 ? 13.766 12.857 4.245  1.00 20.57 ? 5   DA  A "C1'"  1 
ATOM   94  N  N9     . DA  A 1 5 ? 12.564 12.158 3.792  1.00 19.60 ? 5   DA  A N9     1 
ATOM   95  C  C8     . DA  A 1 5 ? 11.901 11.122 4.422  1.00 19.78 ? 5   DA  A C8     1 
ATOM   96  N  N7     . DA  A 1 5 ? 10.860 10.679 3.752  1.00 19.67 ? 5   DA  A N7     1 
ATOM   97  C  C5     . DA  A 1 5 ? 10.834 11.470 2.610  1.00 18.94 ? 5   DA  A C5     1 
ATOM   98  C  C6     . DA  A 1 5 ? 9.971  11.494 1.500  1.00 19.06 ? 5   DA  A C6     1 
ATOM   99  N  N6     . DA  A 1 5 ? 8.941  10.657 1.339  1.00 18.10 ? 5   DA  A N6     1 
ATOM   100 N  N1     . DA  A 1 5 ? 10.201 12.424 0.549  1.00 17.68 ? 5   DA  A N1     1 
ATOM   101 C  C2     . DA  A 1 5 ? 11.227 13.268 0.715  1.00 16.78 ? 5   DA  A C2     1 
ATOM   102 N  N3     . DA  A 1 5 ? 12.109 13.346 1.715  1.00 18.09 ? 5   DA  A N3     1 
ATOM   103 C  C4     . DA  A 1 5 ? 11.862 12.402 2.633  1.00 19.01 ? 5   DA  A C4     1 
ATOM   104 P  P      . DC  A 1 6 ? 12.414 16.279 7.383  1.00 25.77 ? 6   DC  A P      1 
ATOM   105 O  OP1    . DC  A 1 6 ? 13.115 17.345 8.159  1.00 25.11 ? 6   DC  A OP1    1 
ATOM   106 O  OP2    . DC  A 1 6 ? 11.303 15.509 7.993  1.00 23.71 ? 6   DC  A OP2    1 
ATOM   107 O  "O5'"  . DC  A 1 6 ? 11.875 16.919 6.040  1.00 24.15 ? 6   DC  A "O5'"  1 
ATOM   108 C  "C5'"  . DC  A 1 6 ? 12.753 17.624 5.189  1.00 23.66 ? 6   DC  A "C5'"  1 
ATOM   109 C  "C4'"  . DC  A 1 6 ? 12.036 18.027 3.926  1.00 24.35 ? 6   DC  A "C4'"  1 
ATOM   110 O  "O4'"  . DC  A 1 6 ? 11.861 16.829 3.123  1.00 22.88 ? 6   DC  A "O4'"  1 
ATOM   111 C  "C3'"  . DC  A 1 6 ? 10.624 18.555 4.149  1.00 24.77 ? 6   DC  A "C3'"  1 
ATOM   112 O  "O3'"  . DC  A 1 6 ? 10.533 19.962 4.262  1.00 26.00 ? 6   DC  A "O3'"  1 
ATOM   113 C  "C2'"  . DC  A 1 6 ? 9.871  18.105 2.910  1.00 24.24 ? 6   DC  A "C2'"  1 
ATOM   114 C  "C1'"  . DC  A 1 6 ? 10.642 16.896 2.394  1.00 22.92 ? 6   DC  A "C1'"  1 
ATOM   115 N  N1     . DC  A 1 6 ? 9.808  15.728 2.766  1.00 21.71 ? 6   DC  A N1     1 
ATOM   116 C  C2     . DC  A 1 6 ? 8.846  15.274 1.851  1.00 21.03 ? 6   DC  A C2     1 
ATOM   117 O  O2     . DC  A 1 6 ? 8.715  15.887 0.788  1.00 22.28 ? 6   DC  A O2     1 
ATOM   118 N  N3     . DC  A 1 6 ? 8.077  14.197 2.155  1.00 19.55 ? 6   DC  A N3     1 
ATOM   119 C  C4     . DC  A 1 6 ? 8.207  13.581 3.335  1.00 19.20 ? 6   DC  A C4     1 
ATOM   120 N  N4     . DC  A 1 6 ? 7.411  12.522 3.584  1.00 18.92 ? 6   DC  A N4     1 
ATOM   121 C  C5     . DC  A 1 6 ? 9.154  14.016 4.310  1.00 21.35 ? 6   DC  A C5     1 
ATOM   122 C  C6     . DC  A 1 6 ? 9.948  15.104 3.980  1.00 20.33 ? 6   DC  A C6     1 
ATOM   123 P  P      . DA  A 1 7 ? 9.259  20.584 5.005  1.00 26.66 ? 7   DA  A P      1 
ATOM   124 O  OP1    . DA  A 1 7 ? 9.634  21.993 5.360  1.00 28.52 ? 7   DA  A OP1    1 
ATOM   125 O  OP2    . DA  A 1 7 ? 8.776  19.667 6.074  1.00 27.11 ? 7   DA  A OP2    1 
ATOM   126 O  "O5'"  . DA  A 1 7 ? 8.152  20.608 3.885  1.00 25.01 ? 7   DA  A "O5'"  1 
ATOM   127 C  "C5'"  . DA  A 1 7 ? 8.411  21.255 2.650  1.00 24.95 ? 7   DA  A "C5'"  1 
ATOM   128 C  "C4'"  . DA  A 1 7 ? 7.163  21.274 1.805  1.00 24.60 ? 7   DA  A "C4'"  1 
ATOM   129 O  "O4'"  . DA  A 1 7 ? 7.025  19.952 1.225  1.00 23.62 ? 7   DA  A "O4'"  1 
ATOM   130 C  "C3'"  . DA  A 1 7 ? 5.888  21.519 2.597  1.00 25.18 ? 7   DA  A "C3'"  1 
ATOM   131 O  "O3'"  . DA  A 1 7 ? 5.387  22.841 2.510  1.00 26.53 ? 7   DA  A "O3'"  1 
ATOM   132 C  "C2'"  . DA  A 1 7 ? 4.872  20.565 2.005  1.00 25.39 ? 7   DA  A "C2'"  1 
ATOM   133 C  "C1'"  . DA  A 1 7 ? 5.667  19.543 1.213  1.00 22.90 ? 7   DA  A "C1'"  1 
ATOM   134 N  N9     . DA  A 1 7 ? 5.586  18.264 1.926  1.00 21.50 ? 7   DA  A N9     1 
ATOM   135 C  C8     . DA  A 1 7 ? 6.339  17.823 2.996  1.00 20.01 ? 7   DA  A C8     1 
ATOM   136 N  N7     . DA  A 1 7 ? 6.014  16.620 3.411  1.00 18.70 ? 7   DA  A N7     1 
ATOM   137 C  C5     . DA  A 1 7 ? 4.985  16.246 2.559  1.00 19.84 ? 7   DA  A C5     1 
ATOM   138 C  C6     . DA  A 1 7 ? 4.206  15.077 2.468  1.00 18.53 ? 7   DA  A C6     1 
ATOM   139 N  N6     . DA  A 1 7 ? 4.336  14.024 3.281  1.00 18.21 ? 7   DA  A N6     1 
ATOM   140 N  N1     . DA  A 1 7 ? 3.266  15.025 1.499  1.00 19.29 ? 7   DA  A N1     1 
ATOM   141 C  C2     . DA  A 1 7 ? 3.111  16.088 0.690  1.00 18.61 ? 7   DA  A C2     1 
ATOM   142 N  N3     . DA  A 1 7 ? 3.776  17.242 0.679  1.00 20.44 ? 7   DA  A N3     1 
ATOM   143 C  C4     . DA  A 1 7 ? 4.710  17.255 1.646  1.00 19.17 ? 7   DA  A C4     1 
ATOM   144 P  P      . DC  A 1 8 ? 4.411  23.377 3.672  1.00 27.04 ? 8   DC  A P      1 
ATOM   145 O  OP1    . DC  A 1 8 ? 4.438  24.866 3.542  1.00 29.58 ? 8   DC  A OP1    1 
ATOM   146 O  OP2    . DC  A 1 8 ? 4.823  22.752 4.956  1.00 29.00 ? 8   DC  A OP2    1 
ATOM   147 O  "O5'"  . DC  A 1 8 ? 2.969  22.842 3.277  1.00 26.76 ? 8   DC  A "O5'"  1 
ATOM   148 C  "C5'"  . DC  A 1 8 ? 2.397  23.151 2.001  1.00 28.76 ? 8   DC  A "C5'"  1 
ATOM   149 C  "C4'"  . DC  A 1 8 ? 1.078  22.435 1.810  1.00 29.92 ? 8   DC  A "C4'"  1 
ATOM   150 O  "O4'"  . DC  A 1 8 ? 1.275  20.993 1.763  1.00 29.69 ? 8   DC  A "O4'"  1 
ATOM   151 C  "C3'"  . DC  A 1 8 ? 0.016  22.684 2.888  1.00 30.46 ? 8   DC  A "C3'"  1 
ATOM   152 O  "O3'"  . DC  A 1 8 ? -1.302 22.630 2.313  1.00 32.88 ? 8   DC  A "O3'"  1 
ATOM   153 C  "C2'"  . DC  A 1 8 ? 0.123  21.448 3.759  1.00 29.72 ? 8   DC  A "C2'"  1 
ATOM   154 C  "C1'"  . DC  A 1 8 ? 0.440  20.371 2.730  1.00 28.76 ? 8   DC  A "C1'"  1 
ATOM   155 N  N1     . DC  A 1 8 ? 1.183  19.251 3.355  1.00 26.98 ? 8   DC  A N1     1 
ATOM   156 C  C2     . DC  A 1 8 ? 0.664  17.938 3.232  1.00 25.98 ? 8   DC  A C2     1 
ATOM   157 O  O2     . DC  A 1 8 ? -0.358 17.757 2.550  1.00 26.49 ? 8   DC  A O2     1 
ATOM   158 N  N3     . DC  A 1 8 ? 1.288  16.903 3.858  1.00 24.42 ? 8   DC  A N3     1 
ATOM   159 C  C4     . DC  A 1 8 ? 2.389  17.121 4.594  1.00 24.65 ? 8   DC  A C4     1 
ATOM   160 N  N4     . DC  A 1 8 ? 2.934  16.080 5.242  1.00 21.53 ? 8   DC  A N4     1 
ATOM   161 C  C5     . DC  A 1 8 ? 2.976  18.420 4.710  1.00 24.86 ? 8   DC  A C5     1 
ATOM   162 C  C6     . DC  A 1 8 ? 2.332  19.468 4.062  1.00 25.63 ? 8   DC  A C6     1 
HETATM 163 BA BA     . BA  B 2 . ? 9.563  4.396  -3.025 0.88 27.30 ? 101 BA  A BA     1 
HETATM 164 O  O      . HOH C 3 . ? 14.510 14.973 1.257  1.00 20.26 ? 102 HOH A O      1 
HETATM 165 O  O      . HOH C 3 . ? 2.349  19.579 -0.606 1.00 32.07 ? 103 HOH A O      1 
HETATM 166 O  O      . HOH C 3 . ? 6.789  -1.450 -7.827 1.00 35.46 ? 104 HOH A O      1 
HETATM 167 O  O      . HOH C 3 . ? 8.805  2.995  -0.535 1.00 28.99 ? 105 HOH A O      1 
HETATM 168 O  O      . HOH C 3 . ? 8.982  9.067  4.799  1.00 25.51 ? 106 HOH A O      1 
HETATM 169 O  O      . HOH C 3 . ? 5.991  -3.785 2.712  1.00 43.03 ? 107 HOH A O      1 
HETATM 170 O  O      . HOH C 3 . ? 12.704 5.151  11.303 1.00 29.24 ? 108 HOH A O      1 
HETATM 171 O  O      . HOH C 3 . ? 4.085  -4.672 -0.809 1.00 33.23 ? 109 HOH A O      1 
HETATM 172 O  O      . HOH C 3 . ? 16.649 4.569  3.273  1.00 29.11 ? 110 HOH A O      1 
HETATM 173 O  O      . HOH C 3 . ? 9.700  2.470  -4.935 1.00 33.19 ? 111 HOH A O      1 
HETATM 174 O  O      . HOH C 3 . ? 11.995 3.593  -5.925 1.00 39.03 ? 112 HOH A O      1 
HETATM 175 O  O      . HOH C 3 . ? 4.041  26.202 1.226  1.00 33.60 ? 113 HOH A O      1 
HETATM 176 O  O      . HOH C 3 . ? 5.434  -1.048 -3.477 1.00 37.13 ? 114 HOH A O      1 
HETATM 177 O  O      . HOH C 3 . ? 7.059  1.094  -0.401 1.00 46.87 ? 115 HOH A O      1 
HETATM 178 O  O      . HOH C 3 . ? 7.102  8.693  2.802  1.00 28.95 ? 116 HOH A O      1 
HETATM 179 O  O      . HOH C 3 . ? 6.519  15.249 6.006  1.00 39.38 ? 117 HOH A O      1 
HETATM 180 O  O      . HOH C 3 . ? 4.028  -5.695 -3.364 1.00 26.34 ? 118 HOH A O      1 
HETATM 181 O  O      . HOH C 3 . ? 8.656  16.426 7.171  1.00 43.19 ? 119 HOH A O      1 
HETATM 182 O  O      . HOH C 3 . ? 17.170 3.748  5.917  1.00 42.82 ? 120 HOH A O      1 
HETATM 183 O  O      . HOH C 3 . ? 12.100 -3.189 7.752  1.00 46.41 ? 121 HOH A O      1 
HETATM 184 O  O      . HOH C 3 . ? 8.386  3.061  6.455  1.00 51.32 ? 122 HOH A O      1 
HETATM 185 O  O      . HOH C 3 . ? 8.417  3.325  3.807  1.00 37.34 ? 123 HOH A O      1 
HETATM 186 O  O      . HOH C 3 . ? 9.869  2.003  -7.479 1.00 47.57 ? 124 HOH A O      1 
HETATM 187 O  O      . HOH C 3 . ? 8.262  5.889  0.450  1.00 46.35 ? 125 HOH A O      1 
HETATM 188 O  O      . HOH C 3 . ? 8.535  1.450  1.731  1.00 52.58 ? 126 HOH A O      1 
HETATM 189 O  O      . HOH C 3 . ? 13.407 2.842  12.301 1.00 58.07 ? 127 HOH A O      1 
HETATM 190 O  O      . HOH C 3 . ? 10.121 -4.435 6.157  1.00 51.12 ? 128 HOH A O      1 
HETATM 191 O  O      . HOH C 3 . ? 13.103 -0.663 8.384  1.00 54.67 ? 129 HOH A O      1 
HETATM 192 O  O      . HOH C 3 . ? 11.164 0.704  9.495  1.00 63.61 ? 130 HOH A O      1 
HETATM 193 O  O      . HOH C 3 . ? 15.008 -1.302 6.596  1.00 47.68 ? 131 HOH A O      1 
HETATM 194 O  O      . HOH C 3 . ? 9.401  -1.372 8.650  1.00 61.87 ? 132 HOH A O      1 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 DG  1 1 1 DG  GUA A . n 
A 1 2 UMS 2 2 2 UMS UMS A . n 
A 1 3 DG  3 3 3 DG  GUA A . n 
A 1 4 BRU 4 4 4 BRU BRU A . n 
A 1 5 DA  5 5 5 DA  ADE A . n 
A 1 6 DC  6 6 6 DC  CYT A . n 
A 1 7 DA  7 7 7 DA  ADE A . n 
A 1 8 DC  8 8 8 DC  CYT A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 BA  1  101 101 BA  BA  A . 
C 3 HOH 1  102 1   HOH HOH A . 
C 3 HOH 2  103 2   HOH HOH A . 
C 3 HOH 3  104 3   HOH HOH A . 
C 3 HOH 4  105 4   HOH HOH A . 
C 3 HOH 5  106 5   HOH HOH A . 
C 3 HOH 6  107 6   HOH HOH A . 
C 3 HOH 7  108 7   HOH HOH A . 
C 3 HOH 8  109 8   HOH HOH A . 
C 3 HOH 9  110 9   HOH HOH A . 
C 3 HOH 10 111 10  HOH HOH A . 
C 3 HOH 11 112 11  HOH HOH A . 
C 3 HOH 12 113 12  HOH HOH A . 
C 3 HOH 13 114 13  HOH HOH A . 
C 3 HOH 14 115 14  HOH HOH A . 
C 3 HOH 15 116 15  HOH HOH A . 
C 3 HOH 16 117 16  HOH HOH A . 
C 3 HOH 17 118 17  HOH HOH A . 
C 3 HOH 18 119 18  HOH HOH A . 
C 3 HOH 19 120 19  HOH HOH A . 
C 3 HOH 20 121 20  HOH HOH A . 
C 3 HOH 21 122 21  HOH HOH A . 
C 3 HOH 22 123 22  HOH HOH A . 
C 3 HOH 23 124 23  HOH HOH A . 
C 3 HOH 24 125 24  HOH HOH A . 
C 3 HOH 25 126 25  HOH HOH A . 
C 3 HOH 26 127 26  HOH HOH A . 
C 3 HOH 27 128 27  HOH HOH A . 
C 3 HOH 28 129 28  HOH HOH A . 
C 3 HOH 29 130 29  HOH HOH A . 
C 3 HOH 30 131 30  HOH HOH A . 
C 3 HOH 31 132 31  HOH HOH A . 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A UMS 2 A UMS 2 ? DU ? 
2 A BRU 4 A BRU 4 ? DU ? 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555 x,y,z  1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000  0.0000000000 
2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O4 ? A UMS 2 ? A UMS 2   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O6 ? A DG  3 ? A DG  3   ? 1_555 71.0  ? 
2  O4 ? A UMS 2 ? A UMS 2   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 105 ? 1_555 76.1  ? 
3  O6 ? A DG  3 ? A DG  3   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 105 ? 1_555 86.5  ? 
4  O4 ? A UMS 2 ? A UMS 2   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 111 ? 1_555 66.3  ? 
5  O6 ? A DG  3 ? A DG  3   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 111 ? 1_555 130.7 ? 
6  O  ? C HOH . ? A HOH 105 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 111 ? 1_555 105.6 ? 
7  O4 ? A UMS 2 ? A UMS 2   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 116 ? 7_555 146.8 ? 
8  O6 ? A DG  3 ? A DG  3   ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 116 ? 7_555 76.3  ? 
9  O  ? C HOH . ? A HOH 105 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 116 ? 7_555 107.8 ? 
10 O  ? C HOH . ? A HOH 111 ? 1_555 BA ? B BA . ? A BA 101 ? 1_555 O  ? C HOH . ? A HOH 116 ? 7_555 138.0 ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2006-05-23 
2 'Structure model' 1 1 2008-05-01 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2023-08-30 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
6 4 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom                
2 4 'Structure model' chem_comp_bond                
3 4 'Structure model' database_2                    
4 4 'Structure model' pdbx_initial_refinement_model 
5 4 'Structure model' pdbx_struct_conn_angle        
6 4 'Structure model' struct_conn                   
7 4 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                        
2  4 'Structure model' '_database_2.pdbx_database_accession'         
3  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
5  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
6  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
7  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
8  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
9  4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
15 4 'Structure model' '_pdbx_struct_conn_angle.value'               
16 4 'Structure model' '_struct_conn.pdbx_dist_value'                
17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'         
18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
30 4 'Structure model' '_struct_site.pdbx_auth_asym_id'              
31 4 'Structure model' '_struct_site.pdbx_auth_comp_id'              
32 4 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
CNS      refinement        1.1 ? 1 
CBASS    'data collection' .   ? 2 
HKL-2000 'data scaling'    .   ? 3 
CNS      phasing           .   ? 4 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 C5 A DG 3 ? ? C6 A DG 3 ? ? 1.483 1.419 0.064 0.010 N 
2 1 C5 A DC 8 ? ? C6 A DC 8 ? ? 1.390 1.339 0.051 0.008 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 100.68 108.00 -7.32 0.70 N 
2 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 100.40 108.00 -7.60 0.70 N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
BA  BA     BA N N 1   
BRU N1     N  N N 2   
BRU C2     C  N N 3   
BRU N3     N  N N 4   
BRU C4     C  N N 5   
BRU C5     C  N N 6   
BRU C6     C  N N 7   
BRU O2     O  N N 8   
BRU O4     O  N N 9   
BRU BR     BR N N 10  
BRU "C1'"  C  N R 11  
BRU "C2'"  C  N N 12  
BRU "C3'"  C  N S 13  
BRU "C4'"  C  N R 14  
BRU "O3'"  O  N N 15  
BRU "O4'"  O  N N 16  
BRU "C5'"  C  N N 17  
BRU "O5'"  O  N N 18  
BRU P      P  N N 19  
BRU OP1    O  N N 20  
BRU OP2    O  N N 21  
BRU OP3    O  N N 22  
BRU HN3    H  N N 23  
BRU H6     H  N N 24  
BRU "H1'"  H  N N 25  
BRU "H2'"  H  N N 26  
BRU "H2''" H  N N 27  
BRU "H3'"  H  N N 28  
BRU "H4'"  H  N N 29  
BRU "HO3'" H  N N 30  
BRU "H5'"  H  N N 31  
BRU "H5''" H  N N 32  
BRU HOP2   H  N N 33  
BRU HOP3   H  N N 34  
DA  OP3    O  N N 35  
DA  P      P  N N 36  
DA  OP1    O  N N 37  
DA  OP2    O  N N 38  
DA  "O5'"  O  N N 39  
DA  "C5'"  C  N N 40  
DA  "C4'"  C  N R 41  
DA  "O4'"  O  N N 42  
DA  "C3'"  C  N S 43  
DA  "O3'"  O  N N 44  
DA  "C2'"  C  N N 45  
DA  "C1'"  C  N R 46  
DA  N9     N  Y N 47  
DA  C8     C  Y N 48  
DA  N7     N  Y N 49  
DA  C5     C  Y N 50  
DA  C6     C  Y N 51  
DA  N6     N  N N 52  
DA  N1     N  Y N 53  
DA  C2     C  Y N 54  
DA  N3     N  Y N 55  
DA  C4     C  Y N 56  
DA  HOP3   H  N N 57  
DA  HOP2   H  N N 58  
DA  "H5'"  H  N N 59  
DA  "H5''" H  N N 60  
DA  "H4'"  H  N N 61  
DA  "H3'"  H  N N 62  
DA  "HO3'" H  N N 63  
DA  "H2'"  H  N N 64  
DA  "H2''" H  N N 65  
DA  "H1'"  H  N N 66  
DA  H8     H  N N 67  
DA  H61    H  N N 68  
DA  H62    H  N N 69  
DA  H2     H  N N 70  
DC  OP3    O  N N 71  
DC  P      P  N N 72  
DC  OP1    O  N N 73  
DC  OP2    O  N N 74  
DC  "O5'"  O  N N 75  
DC  "C5'"  C  N N 76  
DC  "C4'"  C  N R 77  
DC  "O4'"  O  N N 78  
DC  "C3'"  C  N S 79  
DC  "O3'"  O  N N 80  
DC  "C2'"  C  N N 81  
DC  "C1'"  C  N R 82  
DC  N1     N  N N 83  
DC  C2     C  N N 84  
DC  O2     O  N N 85  
DC  N3     N  N N 86  
DC  C4     C  N N 87  
DC  N4     N  N N 88  
DC  C5     C  N N 89  
DC  C6     C  N N 90  
DC  HOP3   H  N N 91  
DC  HOP2   H  N N 92  
DC  "H5'"  H  N N 93  
DC  "H5''" H  N N 94  
DC  "H4'"  H  N N 95  
DC  "H3'"  H  N N 96  
DC  "HO3'" H  N N 97  
DC  "H2'"  H  N N 98  
DC  "H2''" H  N N 99  
DC  "H1'"  H  N N 100 
DC  H41    H  N N 101 
DC  H42    H  N N 102 
DC  H5     H  N N 103 
DC  H6     H  N N 104 
DG  OP3    O  N N 105 
DG  P      P  N N 106 
DG  OP1    O  N N 107 
DG  OP2    O  N N 108 
DG  "O5'"  O  N N 109 
DG  "C5'"  C  N N 110 
DG  "C4'"  C  N R 111 
DG  "O4'"  O  N N 112 
DG  "C3'"  C  N S 113 
DG  "O3'"  O  N N 114 
DG  "C2'"  C  N N 115 
DG  "C1'"  C  N R 116 
DG  N9     N  Y N 117 
DG  C8     C  Y N 118 
DG  N7     N  Y N 119 
DG  C5     C  Y N 120 
DG  C6     C  N N 121 
DG  O6     O  N N 122 
DG  N1     N  N N 123 
DG  C2     C  N N 124 
DG  N2     N  N N 125 
DG  N3     N  N N 126 
DG  C4     C  Y N 127 
DG  HOP3   H  N N 128 
DG  HOP2   H  N N 129 
DG  "H5'"  H  N N 130 
DG  "H5''" H  N N 131 
DG  "H4'"  H  N N 132 
DG  "H3'"  H  N N 133 
DG  "HO3'" H  N N 134 
DG  "H2'"  H  N N 135 
DG  "H2''" H  N N 136 
DG  "H1'"  H  N N 137 
DG  H8     H  N N 138 
DG  H1     H  N N 139 
DG  H21    H  N N 140 
DG  H22    H  N N 141 
HOH O      O  N N 142 
HOH H1     H  N N 143 
HOH H2     H  N N 144 
UMS OP3    O  N N 145 
UMS P      P  N N 146 
UMS OP1    O  N N 147 
UMS OP2    O  N N 148 
UMS "O5'"  O  N N 149 
UMS "C5'"  C  N N 150 
UMS "C4'"  C  N R 151 
UMS "O4'"  O  N N 152 
UMS "C3'"  C  N R 153 
UMS "O3'"  O  N N 154 
UMS "C2'"  C  N R 155 
UMS "SE2'" SE N N 156 
UMS "C1'"  C  N R 157 
UMS "CA'"  C  N N 158 
UMS N1     N  N N 159 
UMS C2     C  N N 160 
UMS O2     O  N N 161 
UMS N3     N  N N 162 
UMS C4     C  N N 163 
UMS O4     O  N N 164 
UMS C5     C  N N 165 
UMS C6     C  N N 166 
UMS HOP3   H  N N 167 
UMS HOP2   H  N N 168 
UMS "H5'"  H  N N 169 
UMS "H5'2" H  N N 170 
UMS "H4'"  H  N N 171 
UMS "H3'"  H  N N 172 
UMS "HO3'" H  N N 173 
UMS "H2'"  H  N N 174 
UMS "H1'"  H  N N 175 
UMS "HA'"  H  N N 176 
UMS "HA'2" H  N N 177 
UMS "HA'3" H  N N 178 
UMS H3     H  N N 179 
UMS H5     H  N N 180 
UMS H6     H  N N 181 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BRU N1     C2     sing N N 1   
BRU N1     C6     sing N N 2   
BRU N1     "C1'"  sing N N 3   
BRU C2     N3     sing N N 4   
BRU C2     O2     doub N N 5   
BRU N3     C4     sing N N 6   
BRU N3     HN3    sing N N 7   
BRU C4     C5     sing N N 8   
BRU C4     O4     doub N N 9   
BRU C5     C6     doub N N 10  
BRU C5     BR     sing N N 11  
BRU C6     H6     sing N N 12  
BRU "C1'"  "C2'"  sing N N 13  
BRU "C1'"  "O4'"  sing N N 14  
BRU "C1'"  "H1'"  sing N N 15  
BRU "C2'"  "C3'"  sing N N 16  
BRU "C2'"  "H2'"  sing N N 17  
BRU "C2'"  "H2''" sing N N 18  
BRU "C3'"  "C4'"  sing N N 19  
BRU "C3'"  "O3'"  sing N N 20  
BRU "C3'"  "H3'"  sing N N 21  
BRU "C4'"  "O4'"  sing N N 22  
BRU "C4'"  "C5'"  sing N N 23  
BRU "C4'"  "H4'"  sing N N 24  
BRU "O3'"  "HO3'" sing N N 25  
BRU "C5'"  "O5'"  sing N N 26  
BRU "C5'"  "H5'"  sing N N 27  
BRU "C5'"  "H5''" sing N N 28  
BRU "O5'"  P      sing N N 29  
BRU P      OP1    doub N N 30  
BRU P      OP2    sing N N 31  
BRU P      OP3    sing N N 32  
BRU OP2    HOP2   sing N N 33  
BRU OP3    HOP3   sing N N 34  
DA  OP3    P      sing N N 35  
DA  OP3    HOP3   sing N N 36  
DA  P      OP1    doub N N 37  
DA  P      OP2    sing N N 38  
DA  P      "O5'"  sing N N 39  
DA  OP2    HOP2   sing N N 40  
DA  "O5'"  "C5'"  sing N N 41  
DA  "C5'"  "C4'"  sing N N 42  
DA  "C5'"  "H5'"  sing N N 43  
DA  "C5'"  "H5''" sing N N 44  
DA  "C4'"  "O4'"  sing N N 45  
DA  "C4'"  "C3'"  sing N N 46  
DA  "C4'"  "H4'"  sing N N 47  
DA  "O4'"  "C1'"  sing N N 48  
DA  "C3'"  "O3'"  sing N N 49  
DA  "C3'"  "C2'"  sing N N 50  
DA  "C3'"  "H3'"  sing N N 51  
DA  "O3'"  "HO3'" sing N N 52  
DA  "C2'"  "C1'"  sing N N 53  
DA  "C2'"  "H2'"  sing N N 54  
DA  "C2'"  "H2''" sing N N 55  
DA  "C1'"  N9     sing N N 56  
DA  "C1'"  "H1'"  sing N N 57  
DA  N9     C8     sing Y N 58  
DA  N9     C4     sing Y N 59  
DA  C8     N7     doub Y N 60  
DA  C8     H8     sing N N 61  
DA  N7     C5     sing Y N 62  
DA  C5     C6     sing Y N 63  
DA  C5     C4     doub Y N 64  
DA  C6     N6     sing N N 65  
DA  C6     N1     doub Y N 66  
DA  N6     H61    sing N N 67  
DA  N6     H62    sing N N 68  
DA  N1     C2     sing Y N 69  
DA  C2     N3     doub Y N 70  
DA  C2     H2     sing N N 71  
DA  N3     C4     sing Y N 72  
DC  OP3    P      sing N N 73  
DC  OP3    HOP3   sing N N 74  
DC  P      OP1    doub N N 75  
DC  P      OP2    sing N N 76  
DC  P      "O5'"  sing N N 77  
DC  OP2    HOP2   sing N N 78  
DC  "O5'"  "C5'"  sing N N 79  
DC  "C5'"  "C4'"  sing N N 80  
DC  "C5'"  "H5'"  sing N N 81  
DC  "C5'"  "H5''" sing N N 82  
DC  "C4'"  "O4'"  sing N N 83  
DC  "C4'"  "C3'"  sing N N 84  
DC  "C4'"  "H4'"  sing N N 85  
DC  "O4'"  "C1'"  sing N N 86  
DC  "C3'"  "O3'"  sing N N 87  
DC  "C3'"  "C2'"  sing N N 88  
DC  "C3'"  "H3'"  sing N N 89  
DC  "O3'"  "HO3'" sing N N 90  
DC  "C2'"  "C1'"  sing N N 91  
DC  "C2'"  "H2'"  sing N N 92  
DC  "C2'"  "H2''" sing N N 93  
DC  "C1'"  N1     sing N N 94  
DC  "C1'"  "H1'"  sing N N 95  
DC  N1     C2     sing N N 96  
DC  N1     C6     sing N N 97  
DC  C2     O2     doub N N 98  
DC  C2     N3     sing N N 99  
DC  N3     C4     doub N N 100 
DC  C4     N4     sing N N 101 
DC  C4     C5     sing N N 102 
DC  N4     H41    sing N N 103 
DC  N4     H42    sing N N 104 
DC  C5     C6     doub N N 105 
DC  C5     H5     sing N N 106 
DC  C6     H6     sing N N 107 
DG  OP3    P      sing N N 108 
DG  OP3    HOP3   sing N N 109 
DG  P      OP1    doub N N 110 
DG  P      OP2    sing N N 111 
DG  P      "O5'"  sing N N 112 
DG  OP2    HOP2   sing N N 113 
DG  "O5'"  "C5'"  sing N N 114 
DG  "C5'"  "C4'"  sing N N 115 
DG  "C5'"  "H5'"  sing N N 116 
DG  "C5'"  "H5''" sing N N 117 
DG  "C4'"  "O4'"  sing N N 118 
DG  "C4'"  "C3'"  sing N N 119 
DG  "C4'"  "H4'"  sing N N 120 
DG  "O4'"  "C1'"  sing N N 121 
DG  "C3'"  "O3'"  sing N N 122 
DG  "C3'"  "C2'"  sing N N 123 
DG  "C3'"  "H3'"  sing N N 124 
DG  "O3'"  "HO3'" sing N N 125 
DG  "C2'"  "C1'"  sing N N 126 
DG  "C2'"  "H2'"  sing N N 127 
DG  "C2'"  "H2''" sing N N 128 
DG  "C1'"  N9     sing N N 129 
DG  "C1'"  "H1'"  sing N N 130 
DG  N9     C8     sing Y N 131 
DG  N9     C4     sing Y N 132 
DG  C8     N7     doub Y N 133 
DG  C8     H8     sing N N 134 
DG  N7     C5     sing Y N 135 
DG  C5     C6     sing N N 136 
DG  C5     C4     doub Y N 137 
DG  C6     O6     doub N N 138 
DG  C6     N1     sing N N 139 
DG  N1     C2     sing N N 140 
DG  N1     H1     sing N N 141 
DG  C2     N2     sing N N 142 
DG  C2     N3     doub N N 143 
DG  N2     H21    sing N N 144 
DG  N2     H22    sing N N 145 
DG  N3     C4     sing N N 146 
HOH O      H1     sing N N 147 
HOH O      H2     sing N N 148 
UMS OP3    P      sing N N 149 
UMS OP3    HOP3   sing N N 150 
UMS P      OP1    doub N N 151 
UMS P      OP2    sing N N 152 
UMS P      "O5'"  sing N N 153 
UMS OP2    HOP2   sing N N 154 
UMS "O5'"  "C5'"  sing N N 155 
UMS "C5'"  "C4'"  sing N N 156 
UMS "C5'"  "H5'"  sing N N 157 
UMS "C5'"  "H5'2" sing N N 158 
UMS "C4'"  "O4'"  sing N N 159 
UMS "C4'"  "C3'"  sing N N 160 
UMS "C4'"  "H4'"  sing N N 161 
UMS "O4'"  "C1'"  sing N N 162 
UMS "C3'"  "O3'"  sing N N 163 
UMS "C3'"  "C2'"  sing N N 164 
UMS "C3'"  "H3'"  sing N N 165 
UMS "O3'"  "HO3'" sing N N 166 
UMS "C2'"  "SE2'" sing N N 167 
UMS "C2'"  "C1'"  sing N N 168 
UMS "C2'"  "H2'"  sing N N 169 
UMS "SE2'" "CA'"  sing N N 170 
UMS "C1'"  N1     sing N N 171 
UMS "C1'"  "H1'"  sing N N 172 
UMS "CA'"  "HA'"  sing N N 173 
UMS "CA'"  "HA'2" sing N N 174 
UMS "CA'"  "HA'3" sing N N 175 
UMS N1     C2     sing N N 176 
UMS N1     C6     sing N N 177 
UMS C2     O2     doub N N 178 
UMS C2     N3     sing N N 179 
UMS N3     C4     sing N N 180 
UMS N3     H3     sing N N 181 
UMS C4     O4     doub N N 182 
UMS C4     C5     sing N N 183 
UMS C5     C6     doub N N 184 
UMS C5     H5     sing N N 185 
UMS C6     H6     sing N N 186 
# 
_ndb_struct_conf_na.entry_id   2GPX 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG  1 1_555 A DC  8 7_555 -0.324 -0.087 -0.087 -17.278 -11.004 -0.400 1 A_DG1:DC8_A  A 1 ? A 8 ? 19 1 
1 A UMS 2 1_555 A DA  7 7_555 0.095  -0.082 0.015  -6.327  -11.445 4.517  2 A_UMS2:DA7_A A 2 ? A 7 ? 20 1 
1 A DG  3 1_555 A DC  6 7_555 -0.242 -0.125 0.026  -7.201  -13.786 1.945  3 A_DG3:DC6_A  A 3 ? A 6 ? 19 1 
1 A BRU 4 1_555 A DA  5 7_555 0.026  -0.071 0.218  -2.882  -8.458  -3.720 4 A_BRU4:DA5_A A 4 ? A 5 ? 20 1 
1 A DA  5 1_555 A BRU 4 7_555 -0.026 -0.071 0.218  2.882   -8.458  -3.720 5 A_DA5:BRU4_A A 5 ? A 4 ? 20 1 
1 A DC  6 1_555 A DG  3 7_555 0.242  -0.125 0.026  7.201   -13.786 1.945  6 A_DC6:DG3_A  A 6 ? A 3 ? 19 1 
1 A DA  7 1_555 A UMS 2 7_555 -0.095 -0.082 0.015  6.327   -11.445 4.517  7 A_DA7:UMS2_A A 7 ? A 2 ? 20 1 
1 A DC  8 1_555 A DG  1 7_555 0.324  -0.087 -0.087 17.278  -11.004 -0.400 8 A_DC8:DG1_A  A 8 ? A 1 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG  1 1_555 A DC  8 7_555 A UMS 2 1_555 A DA  7 7_555 0.461  -0.981 3.063 1.044  13.297 31.729 -3.498 -0.637 2.479 23.087 
-1.813 34.352 1 AA_DG1UMS2:DA7DC8_AA  A 1 ? A 8 ? A 2 ? A 7 ? 
1 A UMS 2 1_555 A DA  7 7_555 A DG  3 1_555 A DC  6 7_555 0.733  -1.485 3.107 1.853  15.879 27.268 -5.221 -1.058 2.004 30.575 
-3.568 31.532 2 AA_UMS2DG3:DC6DA7_AA  A 2 ? A 7 ? A 3 ? A 6 ? 
1 A DG  3 1_555 A DC  6 7_555 A BRU 4 1_555 A DA  5 7_555 -0.605 -1.433 3.102 -1.484 2.082  37.580 -2.474 0.757  3.042 3.228  
2.300  37.664 3 AA_DG3BRU4:DA5DC6_AA  A 3 ? A 6 ? A 4 ? A 5 ? 
1 A BRU 4 1_555 A DA  5 7_555 A DA  5 1_555 A BRU 4 7_555 0.000  -1.359 3.073 0.000  3.428  28.997 -3.380 0.000  2.896 6.816  
0.000  29.194 4 AA_BRU4DA5:BRU4DA5_AA A 4 ? A 5 ? A 5 ? A 4 ? 
1 A DA  5 1_555 A BRU 4 7_555 A DC  6 1_555 A DG  3 7_555 0.605  -1.433 3.102 1.484  2.082  37.580 -2.474 -0.757 3.042 3.228  
-2.300 37.664 5 AA_DA5DC6:DG3BRU4_AA  A 5 ? A 4 ? A 6 ? A 3 ? 
1 A DC  6 1_555 A DG  3 7_555 A DA  7 1_555 A UMS 2 7_555 -0.733 -1.485 3.107 -1.853 15.879 27.268 -5.221 1.058  2.004 30.575 
3.568  31.532 6 AA_DC6DA7:UMS2DG3_AA  A 6 ? A 3 ? A 7 ? A 2 ? 
1 A DA  7 1_555 A UMS 2 7_555 A DC  8 1_555 A DG  1 7_555 -0.461 -0.981 3.063 -1.044 13.297 31.729 -3.498 0.637  2.479 23.087 
1.813  34.352 7 AA_DA7DC8:DG1UMS2_AA  A 7 ? A 2 ? A 8 ? A 1 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'BARIUM ION' BA  
3 water        HOH 
# 
loop_
_pdbx_initial_refinement_model.id 
_pdbx_initial_refinement_model.entity_id_list 
_pdbx_initial_refinement_model.type 
_pdbx_initial_refinement_model.source_name 
_pdbx_initial_refinement_model.accession_code 
_pdbx_initial_refinement_model.details 
1 ? 'experimental model' PDB 1Z7I 'PDB ENTRY 1Z7I, 2DJL' 
2 ? 'experimental model' PDB 2DJL 'PDB ENTRY 1Z7I, 2DJL' 
# 
