data_2DGC

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  2DGC
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   x-ray
#
_pdbx_vrpt_summary.entry_id                    2DGC
_pdbx_vrpt_summary.PDB_deposition_date         1995-09-28
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2024-02-14
_pdbx_vrpt_summary.report_creation_date        2024-06-12:05:51
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,percentiles,writexml,writecif,writepdf
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
loop_
_pdbx_vrpt_entity.id
_pdbx_vrpt_entity.type
_pdbx_vrpt_entity.description
1  polymer  "DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3')"  
2  polymer  "PROTEIN (GCN4)"  
3  water    water  
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  2  
C  3  
D  3  
#
loop_
_pdbx_vrpt_percentile_list.id
_pdbx_vrpt_percentile_list.range
_pdbx_vrpt_percentile_list.exp_method
1  all  x-ray  
2  2.2  x-ray  
#
loop_
_pdbx_vrpt_percentile_type.id
_pdbx_vrpt_percentile_type.type
1  all_atom_clashscore           
2  Ramachandran_outlier_percent  
3  rotamer_outliers_percent      
#
loop_
_pdbx_vrpt_percentile_conditions.id
_pdbx_vrpt_percentile_conditions.percentile_list_id
_pdbx_vrpt_percentile_conditions.type_id
_pdbx_vrpt_percentile_conditions.rank
_pdbx_vrpt_percentile_conditions.number_entries_total
_pdbx_vrpt_percentile_conditions.res_high
_pdbx_vrpt_percentile_conditions.res_low
1  1  1   43.42  141614     ?     ?  
2  2  1   51.95    5594  2.20  2.20  
3  1  2  100.00  138981     ?     ?  
4  2  2  100.00    5503  2.20  2.20  
5  1  3   13.77  138945     ?     ?  
6  2  3   14.81    5504  2.20  2.20  
#
loop_
_pdbx_vrpt_percentile_entity_view.ordinal
_pdbx_vrpt_percentile_entity_view.conditions_id
_pdbx_vrpt_percentile_entity_view.type_id
_pdbx_vrpt_percentile_entity_view.label_asym_id
_pdbx_vrpt_percentile_entity_view.PDB_model_num
_pdbx_vrpt_percentile_entity_view.entity_id
_pdbx_vrpt_percentile_entity_view.auth_asym_id
_pdbx_vrpt_percentile_entity_view.rank
1  3  2  B  1  2  A  100.00  
2  4  2  B  1  2  A  100.00  
3  5  3  B  1  2  A   15.93  
4  6  3  B  1  2  A   17.88  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  B  2.80  2.43  432  665  
2  1  2  B  A  0.52  0.36  444  586  
#
_pdbx_vrpt_summary_geometry.ordinal                        1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers  0.00
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers       7.32
_pdbx_vrpt_summary_geometry.clashscore                     6.72
_pdbx_vrpt_summary_geometry.num_H_reduce                   675
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                 876
_pdbx_vrpt_summary_geometry.bonds_RMSZ                     1.72
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                1251
_pdbx_vrpt_summary_geometry.angles_RMSZ                    2.07
#
_pdbx_vrpt_summary_diffraction.exp_method           x-ray
_pdbx_vrpt_summary_diffraction.ordinal              1
_pdbx_vrpt_summary_diffraction.PDB_resolution_high  2.20
_pdbx_vrpt_summary_diffraction.PDB_resolution_low   6.00
_pdbx_vrpt_summary_diffraction.PDB_R                0.21
_pdbx_vrpt_summary_diffraction.PDB_Rfree            0.32
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_bond_outliers
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
  1  1  1  A   1  DT   B  -10  .  ?        2     5     5  
  2  1  1  A   2  DG   B   -9  .  ?        3     1     1  
  3  1  1  A   3  DG   B   -8  .  ?        3     2     ?  
  4  1  1  A   4  DA   B   -7  .  ?        ?     2     ?  
  5  1  1  A   5  DG   B   -6  .  ?        ?     1     ?  
  6  1  1  A   6  DA   B   -5  .  ?        1     3     ?  
  7  1  1  A   7  DT   B   -4  .  ?        1     3     ?  
  8  1  1  A   8  DG   B   -3  .  ?        ?     3     ?  
  9  1  1  A   9  DA   B   -2  .  ?        1     3     ?  
 10  1  1  A  10  DC   B   -1  .  ?        2     2     1  
 11  1  1  A  11  DG   B    1  .  ?        3     2     2  
 12  1  1  A  12  DT   B    2  .  ?        1     2     ?  
 13  1  1  A  13  DC   B    3  .  ?        1     5     ?  
 14  1  1  A  14  DA   B    4  .  ?        ?     2     ?  
 15  1  1  A  15  DT   B    5  .  ?        ?     4     ?  
 16  1  1  A  16  DC   B    6  .  ?        2     4     ?  
 17  1  1  A  17  DT   B    7  .  ?        ?     3     ?  
 18  1  1  A  18  DC   B    8  .  ?        2     5     ?  
 19  1  1  A  19  DC   B    9  .  ?        1     1     2  
 20  1  2  B  11  ALA  A  229  .  ?        ?     ?     1  
 21  1  2  B  12  LEU  A  230  .  ?        ?     ?     ?  
 22  1  2  B  13  LYS  A  231  .  ?        ?     ?     ?  
 23  1  2  B  14  ARG  A  232  .  ?        ?     ?     ?  
 24  1  2  B  15  ALA  A  233  .  ?        ?     ?     ?  
 25  1  2  B  16  ARG  A  234  .  ?        ?     ?     ?  
 26  1  2  B  17  ASN  A  235  .  ?        ?     ?     ?  
 27  1  2  B  18  THR  A  236  .  ?        ?     ?     ?  
 28  1  2  B  19  GLU  A  237  .  ?        ?     ?     ?  
 29  1  2  B  20  ALA  A  238  .  ?        ?     ?     ?  
 30  1  2  B  21  ALA  A  239  .  ?        ?     ?     1  
 31  1  2  B  22  ARG  A  240  .  ?        ?     ?     ?  
 32  1  2  B  23  ARG  A  241  .  ?        ?     ?     ?  
 33  1  2  B  24  SER  A  242  .  ?        ?     ?     ?  
 34  1  2  B  25  ARG  A  243  A  ?        ?     ?     2  
 35  1  2  B  25  ARG  A  243  B  ?        ?     ?     ?  
 36  1  2  B  26  ALA  A  244  .  ?        ?     ?     ?  
 37  1  2  B  27  ARG  A  245  .  ?        ?     ?     ?  
 38  1  2  B  28  LYS  A  246  .  ?        ?     ?     ?  
 39  1  2  B  29  LEU  A  247  .  ?        ?     ?     ?  
 40  1  2  B  30  GLN  A  248  .  ?        ?     ?     ?  
 41  1  2  B  31  ARG  A  249  .  ?        ?     ?     ?  
 42  1  2  B  32  MET  A  250  A  ?        ?     ?     ?  
 43  1  2  B  32  MET  A  250  B  ?        ?     ?     ?  
 44  1  2  B  33  LYS  A  251  .  ?        ?     ?     ?  
 45  1  2  B  34  GLN  A  252  .  ?        ?     ?     ?  
 46  1  2  B  35  LEU  A  253  .  ?        ?     ?     ?  
 47  1  2  B  36  GLU  A  254  .  ?        ?     ?     1  
 48  1  2  B  37  ASP  A  255  .  ?        ?     ?     ?  
 49  1  2  B  38  LYS  A  256  .  ?        ?     ?     ?  
 50  1  2  B  39  VAL  A  257  .  ?        ?     ?     ?  
 51  1  2  B  40  GLU  A  258  .  ?        ?     ?     ?  
 52  1  2  B  41  GLU  A  259  .  ?        ?     ?     ?  
 53  1  2  B  42  LEU  A  260  .  ?        ?     ?     ?  
 54  1  2  B  43  LEU  A  261  .  ?        ?     ?     ?  
 55  1  2  B  44  SER  A  262  .  ?        ?     ?     ?  
 56  1  2  B  45  LYS  A  263  .  ?        ?     ?     ?  
 57  1  2  B  46  ASN  A  264  A  ?        ?     ?     ?  
 58  1  2  B  46  ASN  A  264  B  ?        ?     ?     ?  
 59  1  2  B  47  TYR  A  265  .  ?        ?     ?     ?  
 60  1  2  B  48  HIS  A  266  .  ?        ?     ?     ?  
 61  1  2  B  49  LEU  A  267  .  ?        ?     ?     ?  
 62  1  2  B  50  GLU  A  268  .  ?        ?     ?     ?  
 63  1  2  B  51  ASN  A  269  .  ?        ?     ?     1  
 64  1  2  B  52  GLU  A  270  .  ?        ?     ?     ?  
 65  1  2  B  53  VAL  A  271  .  ?        ?     ?     ?  
 66  1  2  B  54  ALA  A  272  .  ?        ?     ?     ?  
 67  1  2  B  55  ARG  A  273  A  ?        ?     ?     ?  
 68  1  2  B  55  ARG  A  273  B  ?        ?     ?     1  
 69  1  2  B  56  LEU  A  274  .  ?        ?     ?     ?  
 70  1  2  B  57  LYS  A  275  .  ?        ?     ?     ?  
 71  1  2  B  58  LYS  A  276  .  ?        ?     ?     ?  
 72  1  2  B  59  LEU  A  277  .  ?        ?     ?     ?  
 73  1  3  C   .  HOH  B   10  .  ?        ?     ?     ?  
 74  1  3  C   .  HOH  B   11  .  ?        ?     ?     ?  
 75  1  3  C   .  HOH  B   12  .  ?        ?     ?     ?  
 76  1  3  C   .  HOH  B   13  .  ?        ?     ?     ?  
 77  1  3  C   .  HOH  B   14  .  ?        ?     ?     ?  
 78  1  3  C   .  HOH  B   15  .  ?        ?     ?     ?  
 79  1  3  C   .  HOH  B   16  .  ?        ?     ?     ?  
 80  1  3  C   .  HOH  B   17  .  ?        ?     ?     ?  
 81  1  3  C   .  HOH  B   18  .  ?        ?     ?     ?  
 82  1  3  C   .  HOH  B   19  .  ?        ?     ?     ?  
 83  1  3  C   .  HOH  B   20  .  ?        ?     ?     ?  
 84  1  3  C   .  HOH  B   21  .  ?        ?     ?     ?  
 85  1  3  C   .  HOH  B   22  .  ?        ?     ?     ?  
 86  1  3  C   .  HOH  B   23  .  ?        ?     ?     ?  
 87  1  3  C   .  HOH  B   24  .  ?        ?     ?     ?  
 88  1  3  C   .  HOH  B   25  .  ?        ?     ?     ?  
 89  1  3  C   .  HOH  B   26  .  ?        ?     ?     ?  
 90  1  3  C   .  HOH  B   27  .  ?        ?     ?     ?  
 91  1  3  C   .  HOH  B   28  .  ?        ?     ?     ?  
 92  1  3  C   .  HOH  B   29  .  ?        ?     ?     ?  
 93  1  3  C   .  HOH  B   30  .  ?        ?     ?     ?  
 94  1  3  C   .  HOH  B   31  .  ?        ?     ?     ?  
 95  1  3  C   .  HOH  B   32  .  ?        ?     ?     ?  
 96  1  3  C   .  HOH  B   33  .  ?        ?     ?     ?  
 97  1  3  D   .  HOH  A    5  .  ?        ?     ?     ?  
 98  1  3  D   .  HOH  A    9  .  ?        ?     ?     ?  
 99  1  3  D   .  HOH  A   14  .  ?        ?     ?     ?  
100  1  3  D   .  HOH  A   16  .  ?        ?     ?     ?  
101  1  3  D   .  HOH  A   18  .  ?        ?     ?     1  
102  1  3  D   .  HOH  A   19  .  ?        ?     ?     ?  
103  1  3  D   .  HOH  A   20  .  ?        ?     ?     ?  
104  1  3  D   .  HOH  A   21  .  ?        ?     ?     ?  
105  1  3  D   .  HOH  A   23  .  ?        ?     ?     ?  
106  1  3  D   .  HOH  A   25  .  ?        ?     ?     ?  
107  1  3  D   .  HOH  A   26  .  ?        ?     ?     ?  
108  1  3  D   .  HOH  A   27  .  ?        ?     ?     ?  
109  1  3  D   .  HOH  A   30  .  ?        ?     ?     ?  
110  1  3  D   .  HOH  A   32  .  ?        ?     ?     ?  
111  1  3  D   .  HOH  A   33  .  ?        ?     ?     ?  
112  1  3  D   .  HOH  A   37  .  ?        ?     ?     ?  
113  1  3  D   .  HOH  A   38  .  ?        ?     ?     ?  
114  1  3  D   .  HOH  A   39  .  ?        ?     ?     ?  
115  1  3  D   .  HOH  A   42  .  ?        ?     ?     ?  
116  1  3  D   .  HOH  A   43  .  ?        ?     ?     ?  
117  1  3  D   .  HOH  A   44  .  ?        ?     ?     ?  
118  1  3  D   .  HOH  A   46  .  ?        ?     ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
 1   1  ?            ?      ?  ?        13  19  2.78  30  4.38  molprobity  
 2   2  ?            ?      ?  ?        11  25  2.66  39  2.56  molprobity  
 3   3  ?            ?      ?  ?        11  25  2.85  39  2.25  molprobity  
 4   4  ?            ?      ?  ?        11  24  1.84  37  2.23  molprobity  
 5   5  ?            ?      ?  ?        11  25  2.12  39  1.61  molprobity  
 6   6  ?            ?      ?  ?        11  24  2.20  37  2.35  molprobity  
 7   7  ?            ?      ?  ?        12  22  2.02  34  3.34  molprobity  
 8   8  ?            ?      ?  ?        11  25  1.68  39  2.85  molprobity  
 9   9  ?            ?      ?  ?        11  24  2.30  37  2.62  molprobity  
10  10  ?            ?      ?  ?        11  21  2.82  32  2.70  molprobity  
11  11  ?            ?      ?  ?        11  25  2.75  39  2.83  molprobity  
12  12  ?            ?      ?  ?        12  22  3.00  34  2.76  molprobity  
13  13  ?            ?      ?  ?        11  21  2.05  32  3.10  molprobity  
14  14  ?            ?      ?  ?        11  24  1.78  37  2.30  molprobity  
15  15  ?            ?      ?  ?        12  22  2.37  34  3.01  molprobity  
16  16  ?            ?      ?  ?        11  21  3.36  32  2.88  molprobity  
17  17  ?            ?      ?  ?        12  22  2.12  34  3.25  molprobity  
18  18  ?            ?      ?  ?        11  21  2.51  32  3.40  molprobity  
19  19  ?            ?      ?  ?        12  20  2.42  28  2.05  molprobity  
20  20  ?            ?      ?  ?         4   5  0.77   7  0.51  molprobity  
21  21  mp       -78.4  -44.4  Favored  11   8  0.24  11  0.73  molprobity  
22  22  pttp     -63.1  -32.6  Favored  13   9  0.36  11  0.39  molprobity  
23  23  mtm180   -67.4  -45.1  Favored  13  11  0.31  14  0.30  molprobity  
24  24  ?        -56.6  -46.1  Favored   5   5  0.28   7  0.21  molprobity  
25  25  mtp85    -64.5  -41.9  Favored  13  11  0.28  14  0.41  molprobity  
26  26  t-20     -66.1  -34.8  Favored   6   8  0.41  11  0.29  molprobity  
27  27  m        -62.2  -32.1  Favored   7   7  0.31  10  0.38  molprobity  
28  28  mm-40    -83.9  -35.9  Favored   6   9  0.47  12  0.41  molprobity  
29  29  ?        -62.8  -35.5  Favored   5   5  0.19   7  0.50  molprobity  
30  30  ?        -68.5  -41.9  Favored   5   5  0.23   7  0.36  molprobity  
31  31  ttm-85   -59.5  -47.0  Favored  13  11  0.51  14  0.42  molprobity  
32  32  mtm-85   -64.8  -40.1  Favored  13  11  0.27  14  0.45  molprobity  
33  33  t        -63.6  -45.3  Favored   5   6  0.37   8  0.14  molprobity  
34  34  mtt85    -61.0  -42.4  Favored  11  11  0.35  14  1.06  molprobity  
35  35  mtt85    -61.0  -42.4  Favored  11  11  0.35  14  1.06  molprobity  
36  36  ?        -59.0  -41.2  Favored   5   5  0.25   7  0.22  molprobity  
37  37  mtt85    -66.0  -40.6  Favored  13  11  0.23  14  0.35  molprobity  
38  38  mtmm     -65.3  -31.1  Favored  13   9  0.46  11  0.32  molprobity  
39  39  OUTLIER  -73.1  -37.9  Favored  11   8  0.24  11  0.58  molprobity  
40  40  pt20     -74.0  -37.2  Favored   8   9  0.30  12  0.33  molprobity  
41  41  mtm180   -60.9  -42.8  Favored  13  11  0.34  14  0.48  molprobity  
42  42  tpt      -59.8  -49.9  Favored   7   8  0.23  10  0.37  molprobity  
43  43  tpt      -59.8  -49.9  Favored   7   8  0.23  10  0.37  molprobity  
44  44  mtmt     -61.8  -43.5  Favored  13   9  0.34  11  0.41  molprobity  
45  45  tt0      -55.5  -50.9  Favored   8   9  0.44  12  0.74  molprobity  
46  46  tp       -60.0  -44.8  Favored  11   8  0.18  11  0.63  molprobity  
47  47  mt-10    -61.8  -37.6  Favored   6   9  0.33  12  0.31  molprobity  
48  48  m-20     -66.2  -40.5  Favored   4   8  0.34  11  0.96  molprobity  
49  49  tptm     -59.6  -42.6  Favored  13   9  0.29  11  0.31  molprobity  
50  50  t        -63.5  -36.2  Favored   9   7  0.41  10  0.58  molprobity  
51  51  tt0      -68.7  -43.4  Favored   6   9  0.30  12  0.47  molprobity  
52  52  tm-20    -64.0  -47.1  Favored   6   9  0.23  12  0.46  molprobity  
53  53  mt       -67.7  -35.9  Favored  11   8  0.31  11  0.44  molprobity  
54  54  OUTLIER  -60.5  -42.2  Favored  11   8  0.43  11  0.95  molprobity  
55  55  p        -71.4  -44.5  Favored   5   6  0.57   8  0.42  molprobity  
56  56  ttmt     -60.6  -40.1  Favored  13   9  0.42  11  0.47  molprobity  
57  57  t-20     -58.6  -48.1  Favored   4   8  0.46  11  0.27  molprobity  
58  58  t-20     -58.6  -48.1  Favored   4   8  0.46  11  0.27  molprobity  
59  59  t80      -59.5  -45.3  Favored   9  13  0.65  18  0.35  molprobity  
60  60  m-70     -63.5  -38.7  Favored   7  11  0.31  15  0.36  molprobity  
61  61  mt       -71.2  -41.2  Favored  11   8  0.21  11  0.84  molprobity  
62  62  tp10     -61.4  -40.2  Favored   6   9  0.30  12  0.37  molprobity  
63  63  t-20     -70.8  -39.9  Favored   6   8  0.25  11  0.52  molprobity  
64  64  OUTLIER  -60.6  -42.5  Favored   6   9  0.18  12  0.28  molprobity  
65  65  t        -60.9  -45.6  Favored   9   7  0.42  10  0.50  molprobity  
66  66  ?        -57.9  -43.0  Favored   5   5  0.19   7  0.33  molprobity  
67  67  ttp85    -63.4  -56.1  Favored  11  11  0.32  14  0.45  molprobity  
68  68  ttp85    -63.4  -56.1  Favored  11  11  0.32  14  0.45  molprobity  
69  69  mt       -60.3  -34.6  Favored  11   8  0.26  11  0.54  molprobity  
70  70  tptt     -57.0  -52.4  Favored  13   9  0.38  11  0.55  molprobity  
71  71  ?        -58.0  -58.8  Favored   2   5  0.35   7  0.30  molprobity  
72  72  ?            ?      ?  ?         2   4  0.27   4  0.42  molprobity  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1    1  "H2''"   1  0.66  2.29  
 2    1  "HO5'"   2  0.65  1.44  
 3    1  H6       2  0.65  1.44  
 4    1  H6       3  0.54  1.91  
 5    1  "O5'"    3  0.54  1.91  
 6    2  C8       1  0.66  2.29  
 7   10  "H2'"    4  0.45  2.51  
 8   11  N7       5  0.58  2.52  
 9   11  C8       4  0.45  2.51  
10   19  OP2      6  0.57  1.87  
11   19  H6       6  0.57  1.87  
12   20  N        7  0.43  2.52  
13   30  O        8  0.40  2.20  
14   34  NH2      5  0.58  2.52  
15   34  HG3      8  0.40  2.20  
16   47  HG3      9  0.56  2.06  
17   63  O       10  0.49  2.12  
18   68  HG3     10  0.49  2.12  
19  101  O        7  0.43  2.52  
#
loop_
_pdbx_vrpt_instance_intra_bond_outliers.ordinal
_pdbx_vrpt_instance_intra_bond_outliers.instance_id
_pdbx_vrpt_instance_intra_bond_outliers.atom_1
_pdbx_vrpt_instance_intra_bond_outliers.atom_2
_pdbx_vrpt_instance_intra_bond_outliers.obs
_pdbx_vrpt_instance_intra_bond_outliers.mean
_pdbx_vrpt_instance_intra_bond_outliers.stdev
_pdbx_vrpt_instance_intra_bond_outliers.Z
_pdbx_vrpt_instance_intra_bond_outliers.link
 1   1  "C5'"  "C4'"  1.570  1.509  0.011   5.58  ?     
 2   1  N1     C2     1.432  1.376  0.008   7.05  ?     
 3   2  "C5'"  "C4'"  1.570  1.509  0.011   5.55  ?     
 4   2  C6     N1     1.346  1.391  0.007  -6.38  ?     
 5   2  P      "O5'"  1.647  1.593  0.010   5.38  ?     
 6   3  "C5'"  "C4'"  1.570  1.509  0.011   5.58  ?     
 7   3  C6     N1     1.351  1.391  0.007  -5.72  ?     
 8   3  P      "O5'"  1.688  1.593  0.010   9.49  ?     
 9   6  "C4'"  "C3'"  1.467  1.521  0.010  -5.37  ?     
10   7  C5     C7     1.529  1.496  0.006   5.52  ?     
11   9  N9     C4     1.419  1.374  0.006   7.46  ?     
12  10  "O3'"  P      1.542  1.607  0.012  -5.39  Y     
13  10  P      "O5'"  1.538  1.593  0.010  -5.50  ?     
14  11  "C4'"  "C3'"  1.579  1.529  0.010   5.03  ?     
15  11  C6     N1     1.340  1.391  0.007  -7.30  ?     
16  11  N9     C8     1.338  1.374  0.007  -5.12  ?     
17  12  C5     C7     1.560  1.496  0.006  10.64  ?     
18  13  "C4'"  "O4'"  1.395  1.446  0.010  -5.08  ?     
19  16  "O3'"  P      1.724  1.607  0.012   9.75  Y     
20  16  P      "O5'"  1.685  1.593  0.010   9.15  ?     
21  18  "O3'"  P      1.670  1.607  0.012   5.28  Y     
22  18  P      "O5'"  1.675  1.593  0.010   8.16  ?     
23  19  P      "O5'"  1.682  1.593  0.010   8.89  ?     
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
_pdbx_vrpt_instance_intra_angle_outliers.link
 1   1  "C4'"  "C3'"  "C2'"   98.181  103.100  0.900  -5.46  ?     
 2   1  C4     C5     C6     122.129  118.000  0.600   6.88  ?     
 3   1  N3     C2     O2     117.496  122.300  0.600  -8.01  ?     
 4   1  "O4'"  "C1'"  "C2'"   98.969  105.900  0.800  -8.66  ?     
 5   1  "O4'"  "C1'"  N1     117.987  108.000  0.700  14.27  ?     
 6   2  "O4'"  "C1'"  N9     102.063  108.000  0.700  -8.48  ?     
 7   3  "O4'"  "C1'"  N9     113.491  108.000  0.700   7.84  ?     
 8   3  P      "O5'"  "C5'"  130.073  120.900  1.600   5.73  ?     
 9   4  "C5'"  "C4'"  "O4'"  118.885  109.300  1.900   5.04  ?     
10   4  "O4'"  "C1'"  "C2'"  100.454  105.900  0.800  -6.81  ?     
11   5  "O4'"  "C1'"  "C2'"  101.660  105.900  0.800  -5.30  ?     
12   6  "C1'"  "O4'"  "C4'"  115.786  110.100  1.000   5.69  ?     
13   6  "C3'"  "C2'"  "C1'"  108.736  102.500  1.200   5.20  ?     
14   6  "O4'"  "C1'"  "C2'"   99.767  105.900  0.800  -7.67  ?     
15   7  P      "O3'"  "C3'"  132.229  119.700  1.200  10.44  Y     
16   7  C6     C5     C7     119.859  122.900  0.600  -5.07  ?     
17   7  "O4'"  "C1'"  "C2'"  101.320  105.900  0.800  -5.73  ?     
18   8  P      "O3'"  "C3'"  130.420  119.700  1.200   8.93  Y     
19   8  "C4'"  "C3'"  "C2'"   98.586  103.100  0.900  -5.02  ?     
20   8  "O4'"  "C4'"  "C3'"  110.957  106.000  0.600   8.26  ?     
21   9  P      "O3'"  "C3'"  127.953  119.700  1.200   6.88  Y     
22   9  "O4'"  "C1'"  "C2'"  101.617  105.900  0.800  -5.35  ?     
23   9  "O4'"  "C4'"  "C3'"  110.251  106.000  0.600   7.08  ?     
24  10  "C1'"  "O4'"  "C4'"  104.280  110.100  1.000  -5.82  ?     
25  10  "O4'"  "C1'"  N1     103.128  108.000  0.700  -6.96  ?     
26  11  P      "O3'"  "C3'"  133.968  119.700  1.200  11.89  Y     
27  11  "O4'"  "C4'"  "C3'"  109.015  106.000  0.600   5.03  ?     
28  12  N1     C2     N3     118.205  114.600  0.600   6.01  ?     
29  12  N3     C2     O2     117.636  122.300  0.600  -7.77  ?     
30  13  N1     C2     O2     124.338  118.900  0.600   9.06  ?     
31  13  N3     C2     O2     117.715  121.900  0.700  -5.98  ?     
32  13  "O4'"  "C1'"  "C2'"   99.800  105.900  0.800  -7.62  ?     
33  13  "O4'"  "C1'"  N1     111.800  108.000  0.700   5.43  ?     
34  13  P      "O5'"  "C5'"  129.348  120.900  1.600   5.28  ?     
35  14  P      "O3'"  "C3'"  130.626  119.700  1.200   9.11  Y     
36  14  "O4'"  "C1'"  N9     103.669  108.000  0.700  -6.19  ?     
37  15  "C1'"  "O4'"  "C4'"  103.041  110.100  1.000  -7.06  ?     
38  15  C4     C5     C6     122.017  118.000  0.600   6.70  ?     
39  15  "C5'"  "C4'"  "C3'"  101.924  114.100  1.800  -6.76  ?     
40  15  C6     C5     C7     118.381  122.900  0.600  -7.53  ?     
41  16  N1     C2     O2     123.057  118.900  0.600   6.93  ?     
42  16  N3     C2     O2     117.809  121.900  0.700  -5.84  ?     
43  16  "O4'"  "C1'"  "C2'"  100.576  105.900  0.800  -6.66  ?     
44  16  "O4'"  "C1'"  N1     112.362  108.000  0.700   6.23  ?     
45  17  C4     C5     C6     121.379  118.000  0.600   5.63  ?     
46  17  "C5'"  "C4'"  "C3'"  102.974  114.100  1.800  -6.18  ?     
47  17  N3     C2     O2     116.947  122.300  0.600  -8.92  ?     
48  18  P      "O3'"  "C3'"  130.003  119.700  1.200   8.59  Y     
49  18  N1     C2     O2     123.612  118.900  0.600   7.85  ?     
50  18  N3     C2     O2     117.597  121.900  0.700  -6.15  ?     
51  18  N3     C4     N4     121.514  118.000  0.700   5.02  ?     
52  18  "O4'"  "C1'"  N1     112.745  108.000  0.700   6.78  ?     
53  19  "O4'"  "C1'"  N1     111.638  108.000  0.700   5.20  ?     
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  Y  
##
