data_1KBS

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  1KBS
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   nmr
#
_pdbx_vrpt_summary.entry_id                    1KBS
_pdbx_vrpt_summary.PDB_deposition_date         1996-07-22
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2022-02-23
_pdbx_vrpt_summary.report_creation_date        2022-08-21:11:34
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,coreclust,chemicalshifts,percentiles,writepdf,writexml,writecif
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
_pdbx_vrpt_entity.id           1
_pdbx_vrpt_entity.type         polymer
_pdbx_vrpt_entity.description  "CTX IV"
#
_pdbx_vrpt_asym.label_asym_id  A
_pdbx_vrpt_asym.entity_id      1
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      1.94
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       0.91
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   476
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  639
#
_pdbx_vrpt_summary_geometry.ordinal                                    1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers_full_length  10.34
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers_full_length       33.93
_pdbx_vrpt_summary_geometry.clashscore_full_length                     17.78
_pdbx_vrpt_summary_geometry.num_H_reduce                               488
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                             476
_pdbx_vrpt_summary_geometry.bonds_RMSZ                                 0.91
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                            639
_pdbx_vrpt_summary_geometry.angles_RMSZ                                1.94
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_plane_outliers
 1  1  1  A   1  ARG  A   1  .  ?        1     ?     1  
 2  1  1  A   2  LYS  A   2  .  ?        ?     2     ?  
 3  1  1  A   3  CYS  A   3  .  ?        ?     1     ?  
 4  1  1  A   4  ASN  A   4  .  ?        ?     ?     ?  
 5  1  1  A   5  LYS  A   5  .  ?        1     ?     ?  
 6  1  1  A   6  LEU  A   6  .  ?        ?     1     ?  
 7  1  1  A   7  VAL  A   7  .  ?        2     2     ?  
 8  1  1  A   8  PRO  A   8  .  ?        ?     2     ?  
 9  1  1  A   9  LEU  A   9  .  ?        ?     2     ?  
10  1  1  A  10  PHE  A  10  .  ?        ?     ?     ?  
11  1  1  A  11  TYR  A  11  .  ?        ?     ?     1  
12  1  1  A  12  LYS  A  12  .  ?        ?     1     ?  
13  1  1  A  13  THR  A  13  .  ?        ?     2     ?  
14  1  1  A  14  CYS  A  14  .  ?        ?     ?     ?  
15  1  1  A  15  PRO  A  15  .  ?        ?     ?     ?  
16  1  1  A  16  ALA  A  16  .  ?        ?     ?     ?  
17  1  1  A  17  GLY  A  17  .  ?        ?     ?     ?  
18  1  1  A  18  LYS  A  18  .  ?        ?     ?     ?  
19  1  1  A  19  ASN  A  19  .  ?        1     2     ?  
20  1  1  A  20  LEU  A  20  .  ?        3     ?     ?  
21  1  1  A  21  CYS  A  21  .  ?        ?     1     ?  
22  1  1  A  22  TYR  A  22  .  ?        ?     2     ?  
23  1  1  A  23  LYS  A  23  .  ?        ?     1     ?  
24  1  1  A  24  MET  A  24  .  ?        ?     ?     ?  
25  1  1  A  25  PHE  A  25  .  ?        ?     2     1  
26  1  1  A  26  MET  A  26  .  ?        ?     ?     ?  
27  1  1  A  27  VAL  A  27  .  ?        ?     ?     ?  
28  1  1  A  28  SER  A  28  .  ?        ?     ?     ?  
29  1  1  A  29  ASN  A  29  .  ?        ?     ?     ?  
30  1  1  A  30  LEU  A  30  .  ?        1     ?     ?  
31  1  1  A  31  THR  A  31  .  ?        ?     ?     ?  
32  1  1  A  32  VAL  A  32  .  ?        1     ?     ?  
33  1  1  A  33  PRO  A  33  .  ?        ?     ?     ?  
34  1  1  A  34  VAL  A  34  .  ?        ?     ?     ?  
35  1  1  A  35  LYS  A  35  .  ?        ?     ?     ?  
36  1  1  A  36  ARG  A  36  .  ?        2     2     1  
37  1  1  A  37  GLY  A  37  .  ?        ?     1     ?  
38  1  1  A  38  CYS  A  38  .  ?        ?     ?     ?  
39  1  1  A  39  ILE  A  39  .  ?        ?     1     ?  
40  1  1  A  40  ASP  A  40  .  ?        ?     ?     ?  
41  1  1  A  41  VAL  A  41  .  ?        ?     ?     ?  
42  1  1  A  42  CYS  A  42  .  ?        ?     ?     ?  
43  1  1  A  43  PRO  A  43  .  ?        ?     ?     ?  
44  1  1  A  44  LYS  A  44  .  ?        ?     ?     ?  
45  1  1  A  45  ASN  A  45  .  ?        ?     ?     ?  
46  1  1  A  46  SER  A  46  .  ?        ?     ?     ?  
47  1  1  A  47  ALA  A  47  .  ?        ?     ?     ?  
48  1  1  A  48  LEU  A  48  .  ?        ?     ?     ?  
49  1  1  A  49  VAL  A  49  .  ?        ?     ?     ?  
50  1  1  A  50  LYS  A  50  .  ?        2     1     ?  
51  1  1  A  51  TYR  A  51  .  ?        ?     ?     ?  
52  1  1  A  52  VAL  A  52  .  ?        ?     ?     ?  
53  1  1  A  53  CYS  A  53  .  ?        ?     ?     ?  
54  1  1  A  54  CYS  A  54  .  ?        ?     2     ?  
55  1  1  A  55  ASN  A  55  .  ?        ?     ?     ?  
56  1  1  A  56  THR  A  56  .  ?        ?     ?     ?  
57  1  1  A  57  ASP  A  57  .  ?        ?     ?     ?  
58  1  1  A  58  ARG  A  58  .  ?        1     2     1  
59  1  1  A  59  CYS  A  59  .  ?        1     2     ?  
60  1  1  A  60  ASN  A  60  .  ?        ?     2     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
 1   1  mtm180        ?       ?  ?        15  11  1.50  14  3.38  molprobity  
 2   2  OUTLIER  -157.9   177.2  Favored  13   9  0.67  11  1.21  molprobity  
 3   3  OUTLIER  -116.0    92.1  Favored   4   6  1.48   8  1.07  molprobity  
 4   4  m-20      -74.2    14.9  Allowed   6   8  0.85  11  0.84  molprobity  
 5   5  mptt     -146.2   151.1  Favored  13   9  0.98  11  2.04  molprobity  
 6   6  mp       -135.0   -60.4  Allowed  11   8  0.58  11  1.82  molprobity  
 7   7  OUTLIER  -121.1  -148.2  OUTLIER   9   7  1.15  11  3.27  molprobity  
 8   8  Cg_endo   -66.7   -36.1  Favored   7   8  0.79  11  1.15  molprobity  
 9   9  OUTLIER  -137.5     1.7  Favored  11   8  1.00  11  1.00  molprobity  
10  10  m-85      -95.0   153.0  Favored   9  12  0.48  16  1.10  molprobity  
11  11  p90      -151.8   147.4  Favored   9  13  0.39  18  1.28  molprobity  
12  12  OUTLIER  -155.2   168.3  Favored  13   9  0.95  11  2.59  molprobity  
13  13  OUTLIER  -110.7   159.1  Favored   7   7  0.74  10  1.90  molprobity  
14  14  m        -110.5   162.5  Favored   4   6  0.63   9  1.94  molprobity  
15  15  Cg_endo   -80.4  -133.6  OUTLIER   7   8  0.98  11  1.09  molprobity  
16  16  ?        -136.7    19.4  Favored   5   5  0.87   7  1.11  molprobity  
17  17  ?        -109.8     3.6  Favored   3   4  0.77   5  1.26  molprobity  
18  18  mptt     -133.9   152.9  Favored  13   9  0.77  11  2.20  molprobity  
19  19  m-20      -95.1   -76.8  Allowed   6   8  1.32  11  2.16  molprobity  
20  20  OUTLIER  -107.8  -155.5  Allowed  11   8  1.91  11  5.75  molprobity  
21  21  t        -153.7   149.2  Favored   4   6  0.84   8  2.26  molprobity  
22  22  p90      -146.2   144.0  Favored   9  13  0.92  18  1.64  molprobity  
23  23  mttt      -92.1   123.1  Favored  13   9  0.57  11  1.59  molprobity  
24  24  ttp       -87.9   116.8  Favored   9   8  0.44  10  0.95  molprobity  
25  25  m-85     -121.1  -170.3  Allowed   9  12  0.58  16  1.08  molprobity  
26  26  mtp      -138.9   163.5  Favored   9   8  0.83  10  0.80  molprobity  
27  27  t        -116.1   -10.3  Favored   9   7  0.75  10  1.16  molprobity  
28  28  OUTLIER   -95.8    -0.7  Favored   5   6  0.67   8  1.46  molprobity  
29  29  OUTLIER  -117.0  -175.8  Favored   6   8  0.84  11  1.89  molprobity  
30  30  mt       -103.7   -12.2  Favored  11   8  0.68  11  2.85  molprobity  
31  31  p        -113.4  -155.2  Allowed   7   7  1.38  10  2.57  molprobity  
32  32  t        -173.6   -52.1  OUTLIER   9   7  1.40  11  2.11  molprobity  
33  33  Cg_endo   -77.7   142.5  Favored   7   8  0.99  11  1.22  molprobity  
34  34  t        -154.4   -70.2  OUTLIER   9   7  0.90  10  1.51  molprobity  
35  35  mttt     -155.7  -172.7  Favored  13   9  0.86  11  1.22  molprobity  
36  36  ttm180   -156.9   166.6  Favored  13  11  1.05  14  3.31  molprobity  
37  37  ?        -152.8  -168.6  Favored   3   4  0.35   5  2.26  molprobity  
38  38  OUTLIER   -84.7  -176.4  Favored   4   6  0.51   8  1.44  molprobity  
39  39  mt       -154.3   164.6  Allowed  11   8  0.64  11  1.39  molprobity  
40  40  t0       -115.2   -32.9  Favored   4   8  0.96  11  0.97  molprobity  
41  41  OUTLIER  -144.9   138.7  Favored   9   7  0.43  10  1.15  molprobity  
42  42  t        -105.1   102.3  Favored   4   6  0.71   9  0.99  molprobity  
43  43  Cg_endo   -82.6  -117.5  OUTLIER   7   8  0.63  11  1.27  molprobity  
44  44  OUTLIER  -108.5  -167.6  Allowed  13   9  0.90  11  2.04  molprobity  
45  45  OUTLIER  -133.3   149.2  Favored   6   8  1.00  11  1.72  molprobity  
46  46  OUTLIER   -96.0  -179.3  Favored   5   6  0.67   8  1.74  molprobity  
47  47  ?         -98.2    19.4  Favored   5   5  0.54   7  1.08  molprobity  
48  48  mt       -119.1   -39.8  Favored  11   8  0.39  11  1.07  molprobity  
49  49  m        -129.3   140.9  Favored   9   7  0.93  10  1.67  molprobity  
50  50  OUTLIER   -89.8   103.8  Favored  13   9  1.67  11  2.72  molprobity  
51  51  m-85      -85.0   102.7  Favored   9  13  0.63  18  1.23  molprobity  
52  52  OUTLIER  -104.8    76.3  Allowed   9   7  0.51  10  1.38  molprobity  
53  53  p         -68.3   162.2  Favored   4   6  0.39   8  1.51  molprobity  
54  54  p        -171.6   159.4  Favored   4   6  0.72   8  1.76  molprobity  
55  55  OUTLIER  -119.8    17.7  Favored   6   8  0.69  11  1.60  molprobity  
56  56  p         -85.6  -165.7  Allowed   7   7  0.61  10  1.47  molprobity  
57  57  OUTLIER   -39.3   -28.1  OUTLIER   4   8  0.80  11  1.35  molprobity  
58  58  mtt180   -103.2    20.5  Favored  13  11  0.80  14  2.53  molprobity  
59  59  OUTLIER  -150.8   -80.2  Allowed   4   6  1.39   8  2.70  molprobity  
60  60  p-10          ?       ?  ?         6   8  1.13   8  1.35  molprobity  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
 1   2  HB2    1  0.52  1.82  
 2   2  CB     2  0.49  2.37  
 3   3  HA     3  0.41  2.36  
 4   6  HD11   4  0.50  1.83  
 5   7  HB     5  0.43  2.43  
 6   7  HB     6  0.42  1.91  
 7   8  CD     5  0.43  2.43  
 8   8  HD2    6  0.42  1.91  
 9   9  HD12   7  0.45  2.12  
10   9  O      7  0.45  2.12  
11  12  HB2    4  0.50  1.83  
12  13  HA     1  0.52  1.82  
13  13  HA     2  0.49  2.37  
14  19  O      8  0.60  1.97  
15  19  O      9  0.49  2.60  
16  21  SG    10  0.60  2.59  
17  22  CD1   11  0.43  2.49  
18  22  O     12  0.41  2.15  
19  23  HB2   13  0.41  2.51  
20  25  HB2   14  0.57  1.76  
21  25  CE2   13  0.41  2.51  
22  36  NH2   15  0.66  2.69  
23  36  HG3   12  0.41  2.15  
24  37  O     10  0.60  2.59  
25  39  HG13  11  0.43  2.49  
26  50  HB2   14  0.57  1.76  
27  54  SG    15  0.66  2.69  
28  54  O     16  0.50  2.60  
29  58  C     17  0.54  2.85  
30  58  C      3  0.41  2.36  
31  59  SG    17  0.54  2.85  
32  59  CB    16  0.50  2.60  
33  60  HB3    8  0.60  1.97  
34  60  CB     9  0.49  2.60  
#
loop_
_pdbx_vrpt_instance_intra_plane_outliers.ordinal
_pdbx_vrpt_instance_intra_plane_outliers.instance_id
_pdbx_vrpt_instance_intra_plane_outliers.type
_pdbx_vrpt_instance_intra_plane_outliers.plane_rmsd
1   1  sidechain  0.32  
2  11  sidechain  0.07  
3  25  sidechain  0.09  
4  36  sidechain  0.08  
5  58  sidechain  0.08  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
 1   1  NE   CZ  NH2  116.291  120.300  0.500  -8.02  
 2   5  CD   CE  NZ   124.292  111.700  2.300   5.47  
 3   7  CA   CB  CG2  118.481  110.900  1.500   5.05  
 4   7  CB   CA  C    125.634  111.400  1.900   7.49  
 5  19  CB   CA  C    121.519  110.400  2.000   5.56  
 6  20  CB   CA  C    122.207  110.200  1.900   6.32  
 7  20  CB   CG  CD1  101.232  111.000  1.700  -5.75  
 8  20  CB   CG  CD2  138.542  111.000  1.700  16.20  
 9  30  N    CA  CB    99.582  110.400  2.000  -5.41  
10  32  N    CA  C     96.416  111.000  2.700  -5.40  
11  36  NE   CZ  NH2  116.208  120.300  0.500  -8.18  
12  36  NH1  CZ  NH2  125.486  119.400  1.100   5.53  
13  50  CA   CB  CG   126.423  113.400  2.200   5.92  
14  50  CB   CG  CD   124.793  111.600  2.600   5.07  
15  58  NE   CZ  NH1  123.798  120.300  0.500   7.00  
16  59  CB   CA  C    122.877  110.400  2.000   6.24  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  N  
##
