data_1BWT

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  1BWT
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   nmr
#
_pdbx_vrpt_summary.entry_id                    1BWT
_pdbx_vrpt_summary.PDB_deposition_date         1998-09-28
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2022-02-16
_pdbx_vrpt_summary.report_creation_date        2022-08-20:12:17
_pdbx_vrpt_summary.attempted_validation_steps  molprobity,validation-pack,coreclust,chemicalshifts,percentiles,writepdf,writexml,writecif
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
_pdbx_vrpt_entity.id           1
_pdbx_vrpt_entity.type         polymer
_pdbx_vrpt_entity.description  "DNA (5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*C)-3')"
#
loop_
_pdbx_vrpt_asym.label_asym_id
_pdbx_vrpt_asym.entity_id
A  1  
B  1  
#
loop_
_pdbx_vrpt_summary_entity_geometry.ordinal
_pdbx_vrpt_summary_entity_geometry.PDB_model_num
_pdbx_vrpt_summary_entity_geometry.entity_id
_pdbx_vrpt_summary_entity_geometry.label_asym_id
_pdbx_vrpt_summary_entity_geometry.auth_asym_id
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ
1  1  1  A  A  2.24  1.45  226  347  
2  1  1  B  B  2.30  1.45  226  347  
#
_pdbx_vrpt_summary_geometry.ordinal                 1
_pdbx_vrpt_summary_geometry.clashscore_full_length  0.00
_pdbx_vrpt_summary_geometry.num_H_reduce            228
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ          452
_pdbx_vrpt_summary_geometry.bonds_RMSZ              1.45
_pdbx_vrpt_summary_geometry.num_angles_RMSZ         694
_pdbx_vrpt_summary_geometry.angles_RMSZ             2.27
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_bond_outliers
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_plane_outliers
 1  1  1  A   1  DG  A   1  .  ?        ?     1     ?  
 2  1  1  A   2  DC  A   2  .  ?        ?     1     1  
 3  1  1  A   3  DG  A   3  .  ?        ?     1     ?  
 4  1  1  A   4  DA  A   4  .  ?        ?     4     ?  
 5  1  1  A   5  DA  A   5  .  ?        ?     2     ?  
 6  1  1  A   6  DT  A   6  .  ?        1     1     ?  
 7  1  1  A   7  DT  A   7  .  ?        1     1     1  
 8  1  1  A   8  DC  A   8  .  ?        ?     2     ?  
 9  1  1  A   9  DG  A   9  .  ?        ?     1     ?  
10  1  1  A  10  DC  A  10  .  ?        ?     ?     1  
11  1  1  B   1  DG  B  11  .  ?        ?     1     ?  
12  1  1  B   2  DC  B  12  .  ?        ?     2     1  
13  1  1  B   3  DG  B  13  .  ?        ?     1     ?  
14  1  1  B   4  DA  B  14  .  ?        ?     2     ?  
15  1  1  B   5  DA  B  15  .  ?        ?     2     ?  
16  1  1  B   6  DT  B  16  .  ?        1     1     ?  
17  1  1  B   7  DT  B  17  .  ?        1     ?     1  
18  1  1  B   8  DC  B  18  .  ?        ?     2     ?  
19  1  1  B   9  DG  B  19  .  ?        ?     1     ?  
20  1  1  B  10  DC  B  20  .  ?        ?     1     1  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
 1   1  12  22  1.39  35  2.08  molprobity  
 2   2  11  21  1.45  32  1.95  molprobity  
 3   3  11  25  1.24  39  2.57  molprobity  
 4   4  11  24  1.34  37  2.64  molprobity  
 5   5  11  24  1.27  37  2.27  molprobity  
 6   6  12  22  1.71  34  2.14  molprobity  
 7   7  12  22  1.81  34  2.28  molprobity  
 8   8  11  21  1.41  32  2.25  molprobity  
 9   9  11  25  1.41  39  2.16  molprobity  
10  10  12  20  1.41  28  1.76  molprobity  
11  11  12  22  1.40  35  2.10  molprobity  
12  12  11  21  1.44  32  1.96  molprobity  
13  13  11  25  1.24  39  2.63  molprobity  
14  14  11  24  1.28  37  2.45  molprobity  
15  15  11  24  1.18  37  2.75  molprobity  
16  16  12  22  1.74  34  2.21  molprobity  
17  17  12  22  1.89  34  2.19  molprobity  
18  18  11  21  1.36  32  2.24  molprobity  
19  19  11  25  1.44  39  2.31  molprobity  
20  20  12  20  1.41  28  1.77  molprobity  
#
loop_
_pdbx_vrpt_instance_intra_plane_outliers.ordinal
_pdbx_vrpt_instance_intra_plane_outliers.instance_id
_pdbx_vrpt_instance_intra_plane_outliers.type
_pdbx_vrpt_instance_intra_plane_outliers.plane_rmsd
1   2  sidechain  0.07  
2   7  sidechain  0.07  
3  10  sidechain  0.06  
4  12  sidechain  0.07  
5  17  sidechain  0.07  
6  20  sidechain  0.06  
#
loop_
_pdbx_vrpt_instance_intra_bond_outliers.ordinal
_pdbx_vrpt_instance_intra_bond_outliers.instance_id
_pdbx_vrpt_instance_intra_bond_outliers.atom_1
_pdbx_vrpt_instance_intra_bond_outliers.atom_2
_pdbx_vrpt_instance_intra_bond_outliers.obs
_pdbx_vrpt_instance_intra_bond_outliers.mean
_pdbx_vrpt_instance_intra_bond_outliers.stdev
_pdbx_vrpt_instance_intra_bond_outliers.Z
1   6  C5  C7  1.528  1.496  0.006  5.29  
2   7  C5  C7  1.529  1.496  0.006  5.48  
3  16  C5  C7  1.529  1.496  0.006  5.53  
4  17  C5  C7  1.532  1.496  0.006  5.96  
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
 1   1  "O4'"  "C1'"  N9     111.547  108.000  0.700   5.07  
 2   2  "O4'"  "C4'"  "C3'"  109.167  106.000  0.600   5.28  
 3   3  "O4'"  "C1'"  N9     114.778  108.000  0.700   9.68  
 4   4  C4     C5     C6     114.090  117.000  0.500  -5.82  
 5   4  C5     C6     N1     120.261  117.700  0.500   5.12  
 6   4  N1     C6     N6     114.377  118.600  0.600  -7.04  
 7   4  "O4'"  "C4'"  "C3'"  110.461  106.000  0.600   7.44  
 8   5  C5     C6     N1     120.434  117.700  0.500   5.47  
 9   5  "O4'"  "C4'"  "C3'"  109.954  106.000  0.600   6.59  
10   6  "O4'"  "C1'"  N1     112.098  108.000  0.700   5.85  
11   7  C6     C5     C7     119.795  122.900  0.600  -5.17  
12   8  N3     C2     O2     118.027  121.900  0.700  -5.53  
13   8  "O4'"  "C4'"  "C3'"  110.065  106.000  0.600   6.78  
14   9  "O4'"  "C4'"  "C3'"  109.437  106.000  0.600   5.73  
15  11  "O4'"  "C1'"  N9     111.751  108.000  0.700   5.36  
16  12  N3     C2     O2     118.390  121.900  0.700  -5.01  
17  12  "O4'"  "C4'"  "C3'"  109.126  106.000  0.600   5.21  
18  13  "O4'"  "C1'"  N9     115.485  108.000  0.700  10.69  
19  14  N1     C6     N6     115.285  118.600  0.600  -5.53  
20  14  "O4'"  "C4'"  "C3'"  110.185  106.000  0.600   6.97  
21  15  "C3'"  "C2'"  "C1'"  108.940  102.500  1.200   5.37  
22  15  "O4'"  "C4'"  "C3'"  111.032  106.000  0.600   8.39  
23  16  "O4'"  "C1'"  N1     112.080  108.000  0.700   5.83  
24  18  N3     C2     O2     118.117  121.900  0.700  -5.40  
25  18  "O4'"  "C4'"  "C3'"  109.983  106.000  0.600   6.64  
26  19  "O4'"  "C4'"  "C3'"  109.739  106.000  0.600   6.23  
27  20  N3     C2     O2     118.247  121.900  0.700  -5.22  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  N  
##
