data_1AWY

_pdbx_vrpt_database.id    PDB
_pdbx_vrpt_database.code  1AWY
#
_pdbx_vrpt_exptl.ordinal  1
_pdbx_vrpt_exptl.method   nmr
#
_pdbx_vrpt_summary.entry_id                    1AWY
_pdbx_vrpt_summary.PDB_deposition_date         1997-10-06
_pdbx_vrpt_summary.PDB_revision_number         4
_pdbx_vrpt_summary.PDB_revision_date           2022-02-16
_pdbx_vrpt_summary.report_creation_date        2022-08-21:10:53
_pdbx_vrpt_summary.attempted_validation_steps  mogul,molprobity,validation-pack,coreclust,chemicalshifts,percentiles,writepdf,writexml,writecif
_pdbx_vrpt_summary.ligands_for_buster_report   N
#
_pdbx_vrpt_entity.id           1
_pdbx_vrpt_entity.type         polymer
_pdbx_vrpt_entity.description  "CONANTOXIN G"
#
_pdbx_vrpt_asym.label_asym_id  A
_pdbx_vrpt_asym.entity_id      1
#
_pdbx_vrpt_summary_entity_geometry.ordinal          1
_pdbx_vrpt_summary_entity_geometry.PDB_model_num    1
_pdbx_vrpt_summary_entity_geometry.entity_id        1
_pdbx_vrpt_summary_entity_geometry.label_asym_id    A
_pdbx_vrpt_summary_entity_geometry.auth_asym_id     A
_pdbx_vrpt_summary_entity_geometry.angles_RMSZ      1.32
_pdbx_vrpt_summary_entity_geometry.bonds_RMSZ       1.39
_pdbx_vrpt_summary_entity_geometry.num_bonds_RMSZ   92
_pdbx_vrpt_summary_entity_geometry.num_angles_RMSZ  114
#
_pdbx_vrpt_summary_geometry.ordinal                                    1
_pdbx_vrpt_summary_geometry.percent_ramachandran_outliers_full_length  9.09
_pdbx_vrpt_summary_geometry.percent_rotamer_outliers_full_length       36.36
_pdbx_vrpt_summary_geometry.clashscore_full_length                     3.56
_pdbx_vrpt_summary_geometry.num_H_reduce                               123
_pdbx_vrpt_summary_geometry.num_bonds_RMSZ                             92
_pdbx_vrpt_summary_geometry.bonds_RMSZ                                 1.39
_pdbx_vrpt_summary_geometry.num_angles_RMSZ                            114
_pdbx_vrpt_summary_geometry.angles_RMSZ                                1.32
#
loop_
_pdbx_vrpt_model_instance.id
_pdbx_vrpt_model_instance.PDB_model_num
_pdbx_vrpt_model_instance.entity_id
_pdbx_vrpt_model_instance.label_asym_id
_pdbx_vrpt_model_instance.label_seq_id
_pdbx_vrpt_model_instance.label_comp_id
_pdbx_vrpt_model_instance.auth_asym_id
_pdbx_vrpt_model_instance.auth_seq_id
_pdbx_vrpt_model_instance.label_alt_id
_pdbx_vrpt_model_instance.PDB_ins_code
_pdbx_vrpt_model_instance.count_bond_outliers
_pdbx_vrpt_model_instance.count_angle_outliers
_pdbx_vrpt_model_instance.count_clashes
_pdbx_vrpt_model_instance.count_mogul_bond_outliers
_pdbx_vrpt_model_instance.count_mogul_angle_outliers
_pdbx_vrpt_model_instance.count_mogul_torsion_outliers
 1  1  1  A   1  GLY  A   1  .  ?        ?     ?     ?     ?     ?     ?  
 2  1  1  A   2  GLU  A   2  .  ?        1     ?     ?     ?     ?     ?  
 3  1  1  A   3  CGU  A   3  .  ?        ?     ?     ?     1     1     3  
 4  1  1  A   4  CGU  A   4  .  ?        ?     ?     ?     1     1     4  
 5  1  1  A   5  LEU  A   5  .  ?        ?     ?     ?     ?     ?     ?  
 6  1  1  A   6  GLN  A   6  .  ?        ?     ?     ?     ?     ?     ?  
 7  1  1  A   7  CGU  A   7  .  ?        ?     ?     ?     1     1     5  
 8  1  1  A   8  ASN  A   8  .  ?        ?     ?     ?     ?     ?     ?  
 9  1  1  A   9  GLN  A   9  .  ?        ?     ?     ?     ?     ?     ?  
10  1  1  A  10  CGU  A  10  .  ?        ?     ?     ?     1     1     2  
11  1  1  A  11  LEU  A  11  .  ?        ?     ?     ?     ?     ?     ?  
12  1  1  A  12  ILE  A  12  .  ?        ?     ?     ?     ?     ?     ?  
13  1  1  A  13  ARG  A  13  .  ?        ?     2     ?     ?     ?     ?  
14  1  1  A  14  CGU  A  14  .  ?        ?     ?     1     1     1     4  
15  1  1  A  15  LYS  A  15  .  ?        ?     ?     ?     ?     ?     ?  
16  1  1  A  16  SER  A  16  .  ?        ?     ?     1     ?     ?     ?  
17  1  1  A  17  ASN  A  17  .  ?        ?     ?     ?     ?     ?     ?  
18  1  1  A  18  NH2  A  18  .  ?        ?     ?     ?     ?     ?     ?  
#
loop_
_pdbx_vrpt_model_instance_geometry.ordinal
_pdbx_vrpt_model_instance_geometry.instance_id
_pdbx_vrpt_model_instance_geometry.rotamer_class
_pdbx_vrpt_model_instance_geometry.phi
_pdbx_vrpt_model_instance_geometry.psi
_pdbx_vrpt_model_instance_geometry.ramachandran_class
_pdbx_vrpt_model_instance_geometry.num_H_reduce
_pdbx_vrpt_model_instance_geometry.num_bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.bonds_RMSZ
_pdbx_vrpt_model_instance_geometry.num_angles_RMSZ
_pdbx_vrpt_model_instance_geometry.angles_RMSZ
_pdbx_vrpt_model_instance_geometry.program_for_bond_angle_geometry
 1   1  ?             ?      ?  ?         5   4  0.24   5  0.64  molprobity  
 2   2  mt-10    -134.3   57.4  Allowed   6   8  3.76   9  1.56  molprobity  
 3   3  ?             ?      ?  ?         4   9  1.95   9  1.30  mogul       
 4   4  ?             ?      ?  ?         4   9  1.95   9  1.30  mogul       
 5   5  mt        -76.6  -32.7  Favored  11   8  0.64  11  0.64  molprobity  
 6   6  mm-40     -47.4  -34.8  Favored   8   8  0.84   9  1.31  molprobity  
 7   7  ?             ?      ?  ?         4   9  1.96   9  1.30  mogul       
 8   8  OUTLIER   -67.8  -39.9  Favored   6   8  0.73  11  0.81  molprobity  
 9   9  OUTLIER   -69.4  -28.5  Favored   8   8  0.83   9  1.31  molprobity  
10  10  ?             ?      ?  ?         4   9  1.96   9  1.28  mogul       
11  11  tp        -74.0  -26.5  Favored  11   8  0.66  11  0.55  molprobity  
12  12  mt        -71.9  -26.9  Favored  11   8  0.87  11  0.88  molprobity  
13  13  OUTLIER   -67.3  -37.5  Favored  13  10  1.39  11  3.13  molprobity  
14  14  ?             ?      ?  ?         4   9  1.96   9  1.29  mogul       
15  15  mmpt?     -48.3  -23.4  Allowed  13   9  0.62  11  0.73  molprobity  
16  16  p         -51.0  172.2  OUTLIER   5   6  1.31   8  0.46  molprobity  
17  17  OUTLIER   -94.4  -40.6  Favored   6   7  0.75   8  0.85  molprobity  
#
loop_
_pdbx_vrpt_instance_clashes.ordinal
_pdbx_vrpt_instance_clashes.instance_id
_pdbx_vrpt_instance_clashes.label_atom_id
_pdbx_vrpt_instance_clashes.cid
_pdbx_vrpt_instance_clashes.clashmag
_pdbx_vrpt_instance_clashes.dist
1  14  C  1  0.42  2.82  
2  16  N  1  0.42  2.82  
#
_pdbx_vrpt_instance_intra_bond_outliers.ordinal      1
_pdbx_vrpt_instance_intra_bond_outliers.instance_id  2
_pdbx_vrpt_instance_intra_bond_outliers.atom_1       CD
_pdbx_vrpt_instance_intra_bond_outliers.atom_2       OE1
_pdbx_vrpt_instance_intra_bond_outliers.obs          1.361
_pdbx_vrpt_instance_intra_bond_outliers.mean         1.252
_pdbx_vrpt_instance_intra_bond_outliers.stdev        0.011
_pdbx_vrpt_instance_intra_bond_outliers.Z            9.87
#
loop_
_pdbx_vrpt_instance_intra_angle_outliers.ordinal
_pdbx_vrpt_instance_intra_angle_outliers.instance_id
_pdbx_vrpt_instance_intra_angle_outliers.atom_1
_pdbx_vrpt_instance_intra_angle_outliers.atom_2
_pdbx_vrpt_instance_intra_angle_outliers.atom_3
_pdbx_vrpt_instance_intra_angle_outliers.obs
_pdbx_vrpt_instance_intra_angle_outliers.mean
_pdbx_vrpt_instance_intra_angle_outliers.stdev
_pdbx_vrpt_instance_intra_angle_outliers.Z
1  13  NE  CZ  NH1  124.400  120.300  0.500   8.20  
2  13  NE  CZ  NH2  117.496  120.300  0.500  -5.61  
#
loop_
_pdbx_vrpt_instance_mogul_bond_outliers.ordinal
_pdbx_vrpt_instance_mogul_bond_outliers.instance_id
_pdbx_vrpt_instance_mogul_bond_outliers.atom_1
_pdbx_vrpt_instance_mogul_bond_outliers.atom_2
_pdbx_vrpt_instance_mogul_bond_outliers.obsval
_pdbx_vrpt_instance_mogul_bond_outliers.mean
_pdbx_vrpt_instance_mogul_bond_outliers.numobs
_pdbx_vrpt_instance_mogul_bond_outliers.stdev
_pdbx_vrpt_instance_mogul_bond_outliers.Zscore
_pdbx_vrpt_instance_mogul_bond_outliers.mindiff
1   3  OE21  CD2  1.36  1.22  7201  0.03  4.69  0.00  
2   4  OE21  CD2  1.36  1.22  7201  0.03  4.71  0.00  
3   7  OE21  CD2  1.36  1.22  7201  0.03  4.72  0.00  
4  10  OE21  CD2  1.36  1.22  7201  0.03  4.69  0.00  
5  14  OE21  CD2  1.36  1.22  7201  0.03  4.72  0.00  
#
loop_
_pdbx_vrpt_instance_mogul_angle_outliers.ordinal
_pdbx_vrpt_instance_mogul_angle_outliers.instance_id
_pdbx_vrpt_instance_mogul_angle_outliers.atom_1
_pdbx_vrpt_instance_mogul_angle_outliers.atom_2
_pdbx_vrpt_instance_mogul_angle_outliers.atom_3
_pdbx_vrpt_instance_mogul_angle_outliers.obsval
_pdbx_vrpt_instance_mogul_angle_outliers.mean
_pdbx_vrpt_instance_mogul_angle_outliers.numobs
_pdbx_vrpt_instance_mogul_angle_outliers.stdev
_pdbx_vrpt_instance_mogul_angle_outliers.Zscore
_pdbx_vrpt_instance_mogul_angle_outliers.mindiff
1   3  CB  CG  CD1  118.40  113.11  21  2.03  2.60  0.65  
2   4  CB  CG  CD1  118.33  113.11  21  2.03  2.57  0.71  
3   7  CB  CG  CD1  118.37  113.11  21  2.03  2.59  0.68  
4  10  CB  CG  CD1  118.35  113.11  21  2.03  2.58  0.70  
5  14  CB  CG  CD1  118.29  113.11  21  2.03  2.55  0.76  
#
loop_
_pdbx_vrpt_instance_mogul_torsion_outliers.ordinal
_pdbx_vrpt_instance_mogul_torsion_outliers.instance_id
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_1
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_2
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_3
_pdbx_vrpt_instance_mogul_torsion_outliers.atom_4
_pdbx_vrpt_instance_mogul_torsion_outliers.obsval
_pdbx_vrpt_instance_mogul_torsion_outliers.mean
_pdbx_vrpt_instance_mogul_torsion_outliers.numobs
_pdbx_vrpt_instance_mogul_torsion_outliers.stdev
_pdbx_vrpt_instance_mogul_torsion_outliers.mindiff
_pdbx_vrpt_instance_mogul_torsion_outliers.local_density
 1   3  N     CA   CB  CG    106.58  54.35  45  14.22  24.53  0.00  
 2   3  C     CA   CB  CG    -16.66  76.58  51  48.70  32.63  0.00  
 3   3  OE12  CD1  CG  CD2    11.50  83.03  43  38.70   4.44  4.65  
 4   4  CA    CB   CG  CD1   -95.27  49.11  56  23.74  12.08  0.00  
 5   4  CA    CB   CG  CD2   141.27  49.11  56  24.86  11.38  0.00  
 6   4  OE21  CD2  CG  CB     15.55  89.05  45  56.42   8.73  4.44  
 7   4  OE21  CD2  CG  CD1  -114.53  42.77  43  24.32   2.30  4.65  
 8   7  CA    CB   CG  CD1   -42.01  75.67  56  49.73   9.05  1.79  
 9   7  OE21  CD2  CG  CB    108.24  53.42  45  22.73   4.68  2.22  
10   7  OE22  CD2  CG  CB    -71.72  54.08  45  23.55   2.81  2.22  
11   7  OE21  CD2  CG  CD1   -21.83  65.05  43  36.16   5.51  2.33  
12   7  OE22  CD2  CG  CD1   158.21  65.55  43  35.42   8.02  2.33  
13  10  N     CA   CB  CG    143.27  47.38  45  26.03   1.88  4.44  
14  10  C     CA   CB  CG     20.04  73.20  51  48.70  29.24  0.00  
15  14  OE11  CD1  CG  CB    -88.94  56.28  45  19.98   8.30  2.22  
16  14  OE12  CD1  CG  CB     91.84  57.06  45  20.38   7.15  2.22  
17  14  OE11  CD1  CG  CD2    37.10  52.01  43  33.74   1.67  4.65  
18  14  OE12  CD1  CG  CD2  -142.13  51.71  43  32.99   5.40  4.65  
#
loop_
_pdbx_vrpt_software.ordinal
_pdbx_vrpt_software.name
_pdbx_vrpt_software.version
_pdbx_vrpt_software.success_y_or_n
1  molprobity   4.02b-467                                                             Y  
2  mogul        "1.8.5 (274361), CSD as541be (2020)"                                  Y  
3  percentiles  "20191225.v01 (using entries in the PDB archive December 25th 2019)"  N  
##
