Sample Info
1. Bacterial isolates obtained from Human Skin and Lesional samples
- Title: Bacterial isolates obtained from Human Skin and Lesional samples
- Description: Bacterial isolates obtained from Human Skin and Lesional samples
- Organism: Serratia marcescens Common name:
- Centre Name: Dr. Souvik Mukherjee, BRIC-National Institute of Biomedical Genomics
- INDA Sample Accession: INS0017628
- INSDC Accession: ERS25069652, SAMEA118581433
- Tax ID: 615
collection date : 2025
geographic location (country and/or sea): India
geographic location (latitude): 22.5744° N DD
geographic location (longitude): 88.3629° E DD
environmental_sample: No
host health state: diseased
host scientific name: Homo Sapiens
Is the sequenced pathogen host associated?: Yes
isolate: NIBMG_HMR_148-2
Experiment and Run details
1. Bacterial Whole Genome Sequencing
Library Source: GENOMIC
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
INDA Experiment Accession: INRX017936
INDA Run Accession: INRR017936
INSDC Accession: ERX14545189
INSDC Run Accession: ERR15139954
File Details:
INDA Run Accession: INRR017936
INSDC Accession: ERX14545189
INSDC Run Accession: ERR15139954
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | DFU-148-2_S293_L002_R2_001.fastq.gz | 942738111 | 1960274550 |
| 2 | DFU-148-2_S293_L002_R1_001.fastq.gz | 911353977 | 1960274550 |