Sample Info
1. BCH 12638
- Title: BCH 12638
- Description: Clinical isolates from diarrheal patients
- Organism: Vibrio paracholerae Common name:
- Centre Name: Translational Health Science and Technology Institute
- INDA Sample Accession: INS0016141
- INSDC Accession: ERS23839710, SAMEA117850031
- Tax ID: 650003
collection date : 2021
geographic location (country and/or sea): India
host health state: diseased
host scientific name: Homo sapiens
isolate: Vibrio paracholerae
strain: BCH 12638_R75_S68
Experiment and Run details
1. Whole genome sequencing of bacterial isolates
Library Source: GENOMIC
Library Selection: RANDOM
Instrument model: NextSeq 2000
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: Lp1
Insert Size: 250
Library Construction protocol: Nextera XT DNA Library preparation kit
Library Selection: RANDOM
Instrument model: NextSeq 2000
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: Lp1
Insert Size: 250
Library Construction protocol: Nextera XT DNA Library preparation kit
INDA Experiment Accession: INRX016400
INDA Run Accession: INRR016400
INSDC Accession: ERX14171186
INSDC Run Accession: ERR14767205
File Details:
INDA Run Accession: INRR016400
INSDC Accession: ERX14171186
INSDC Run Accession: ERR14767205
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | FGL20230519R75WGS490_S68_R1_001.fastq.gz | 88096914 | 143168975 |
| 2 | FGL20230519R75WGS490_S68_R2_001.fastq.gz | 94007785 | 143166865 |