Sample Info
1. ODFD_ODOG_Ecoli_1
- Title: ODFD_ODOG_Ecoli_1
- Description: Drug-resistant pathogenic bacteria isolated from patient blood
- Organism: Escherichia coli Common name:
- Centre Name: The Centre for DNA Fingerprinting and Diagnostics
- INDA Sample Accession: INS0009876
- INSDC Accession: ERS22912060, SAMEA117594708
- Tax ID: 562
geographic location (region and locality): Hyderabad
collected_by: CDFD
host scientific name: Homo sapiens
Is the sequenced pathogen host associated?: Yes
isolate: ODFD_ODOG_Ecoli_1
collection date: 2024-12-15
Experiment and Run details
1. Bacterial genome seuqencing for One Day One Genome (ODOG) initiative
Library Source: GENOMIC
Library Selection: RANDOM PCR
Instrument model: Illumina NovaSeq X
Instrument model: WGS
Library layout: PAIRED
Design description: NaN
Library name: CDFD-Ecoli-1
Insert Size: 425
Library Construction protocol: NaN
Library Selection: RANDOM PCR
Instrument model: Illumina NovaSeq X
Instrument model: WGS
Library layout: PAIRED
Design description: NaN
Library name: CDFD-Ecoli-1
Insert Size: 425
Library Construction protocol: NaN
INDA Experiment Accession: INRX010094
INDA Run Accession: INRR010094
INSDC Accession: ERX13532101
INSDC Run Accession: ERR14129435
File Details:
INDA Run Accession: INRR010094
INSDC Accession: ERX13532101
INSDC Run Accession: ERR14129435
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | E_coli_B36157_R1.fastq.gz | 426996873 | 871517489 |
| 2 | E_coli_B36157_R2.fastq.gz | 436390046 | 871517489 |