Sample Info
1. Bacterial isolates obtained from Human Skin and Lesional samples
- Title: Bacterial isolates obtained from Human Skin and Lesional samples
- Description: Bacterial isolates obtained from Human Skin and Lesional samples
- Organism: Klebsiella pneumoniae Common name:
- Centre Name: Souvik Mukherjee, Shankha Nath, Sabyasachi Bhattacharya, BRIC National Institute of Biomedical Genomics
- INDA Sample Accession: INS0009754
- INSDC Accession: ERS22875703, SAMEA117579918
- Tax ID: 573
collection date : 2024
geographic location (country and/or sea): India
geographic location (latitude): 22.5744° N DD
geographic location (longitude): 88.3629° E DD
environmental_sample: No
host disease status: Skin Diseases
host health state: restricted access
host scientific name: Homo sapiens
Is the sequenced pathogen host associated?: Yes
isolate: NIBMG_HMR_27
Experiment and Run details
1. Bacterial Whole Genome Sequencing
Library Source: GENOMIC
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
INDA Experiment Accession: INRX009922
INDA Run Accession: INRR009922
INSDC Accession: ERX13516570
INSDC Run Accession: ERR14114064
File Details:
INDA Run Accession: INRR009922
INSDC Accession: ERX13516570
INSDC Run Accession: ERR14114064
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | OG-27_S587_L004_R1_001.fastq.gz | 699491641 | 1383448200 |
| 2 | OG-27_S587_L004_R2_001.fastq.gz | 716404163 | 1383448200 |