Sample Info
1. Bacterial isolates obtained from Human Skin and Lesional samples
- Title: Bacterial isolates obtained from Human Skin and Lesional samples
- Description: Bacterial isolates obtained from Human Skin and Lesional samples
- Organism: Staphylococcus aureus Common name:
- Centre Name: Dr. Souvik Mukherjee, BRIC-National Institute of Biomedical Genomics
- INDA Sample Accession: INS0005653
- INSDC Accession: ERS21408699, SAMEA116348048
- Tax ID: 1280
collection date : 2024
geographic location (country and/or sea): India
geographic location (latitude): 22.5744° N DD
geographic location (longitude): 88.3629° E DD
environmental_sample: No
host disease status: Skin Lesion
host health state: diseased
host scientific name: Homo sapiens
Is the sequenced pathogen host associated?: Yes
isolate: NIBMG_HMR_18
Experiment and Run details
1. Bacterial Whole Genome Sequencing
Library Source: GENOMIC
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
Library Selection: size fractionation
Instrument model: Illumina NovaSeq 6000
Instrument model: WGS
Library layout: PAIRED
Design description:
Library name:
Insert Size: 150
Library Construction protocol:
INDA Experiment Accession: INRX005948
INDA Run Accession: INRR005948
INSDC Accession: ERX13327413
INSDC Run Accession: ERR13925538
File Details:
INDA Run Accession: INRR005948
INSDC Accession: ERX13327413
INSDC Run Accession: ERR13925538
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | OG-18_S192_L001_R1_001.fastq.gz | 498098384 | 1012239750 |
| 2 | OG-18_S192_L001_R2_001.fastq.gz | 529671903 | 1012239750 |