Sample Info
1. C34S7B1
- Title: C34S7B1
- Description: AMR surveillance (INSACOG)
- Organism: Bordetella trematum Common name:
- Centre Name: Prof Bhabatosh Das, THSTI
- INDA Sample Accession: INS0005139
- INSDC Accession: ERS21338539, SAMEA116293625
- Tax ID: 123899
geographic location (country and/or sea): India
geographic location (region and locality): India: Faridabad
isolation_source: Wastewater
Experiment and Run details
1. Whole Genome Sequencing
Library Source: GENOMIC
Library Selection: RANDOM
Instrument model: NextSeq 2000
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT library preparation kit (Illumina, USA) used for sequencing
Library name: SWG_FGL_192
Insert Size: 300
Library Construction protocol: Nextera XT Library preparation kit
Library Selection: RANDOM
Instrument model: NextSeq 2000
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT library preparation kit (Illumina, USA) used for sequencing
Library name: SWG_FGL_192
Insert Size: 300
Library Construction protocol: Nextera XT Library preparation kit
INDA Experiment Accession: INRX005419
INDA Run Accession: INRR005419
INSDC Accession: ERX13266445
INSDC Run Accession: ERR13863686
File Details:
INDA Run Accession: INRR005419
INSDC Accession: ERX13266445
INSDC Run Accession: ERR13863686
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | FGL20231216NXQR94WGS1025_S197_R1_001.fastq.gz | 34866056 | 59378805 |
| 2 | FGL20231216NXQR94WGS1025_S197_R2_001.fastq.gz | 36245872 | 59359156 |