Sample Info
1. S11_R6_mgl
- Title: S11_R6_mgl
- Description: clinical isolates from pregnant women
- Organism: Lactobacillus vaginalis Common name:
- Centre Name: Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad
- INDA Sample Accession: INS0004703
- INSDC Accession: ERS18920559, SAMEA115489358
- Tax ID: 1633
isolation_source: Human vagina
collection date: 2018
geographic location (country and/or sea): India
host health state: healthy
host scientific name: Homo sapiens
isolate: Lactobacillus vaginalis
Experiment and Run details
1. Whole genome sequencing of bacterial isolates
Library Source: GENOMIC
Library Selection: RANDOM
Instrument model: Illumina MiSeq
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: LD127
Insert Size: 280
Library Construction protocol: Nextera XT DNA Library preparation kit
Library Selection: RANDOM
Instrument model: Illumina MiSeq
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: LD127
Insert Size: 280
Library Construction protocol: Nextera XT DNA Library preparation kit
INDA Experiment Accession: INRX004625
INDA Run Accession: INRR004625
INSDC Accession: ERX12247551
INSDC Run Accession: ERR12875115
File Details:
INDA Run Accession: INRR004625
INSDC Accession: ERX12247551
INSDC Run Accession: ERR12875115
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | Lactobacillus_S11_L001_R2_001_Run6.fastq.gz | 49978254 | 65413683 |
| 2 | Lactobacillus_S11_L001_R1_001_Run6.fastq.gz | 43251012 | 65185628 |