Sample Info
1. S1_R2_mgl
- Title: S1_R2_mgl
- Description: clinical isolates from pregnant women
- Organism: Lactobacillus jensenii Common name:
- Centre Name: Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad
- INDA Sample Accession: INS0004577
- INSDC Accession: ERS18920398, SAMEA115489220
- Tax ID: 109790
isolation_source: Human vagina
geographic location (country and/or sea): India
host health state: healthy
host scientific name: Homo sapiens
isolate: Lactobacillus jensenii
strain: MGL1
Experiment and Run details
1. Whole genome sequencing of bacterial isolates
Library Source: GENOMIC
Library Selection: RANDOM
Instrument model: Illumina MiSeq
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: LD1
Insert Size: 280
Library Construction protocol: Nextera XT DNA Library preparation kit
Library Selection: RANDOM
Instrument model: Illumina MiSeq
Instrument model: WGS
Library layout: PAIRED
Design description: Nextera XT DNA Library preparation kit (Illumina, Inc, USA) was used for library preparation
Library name: LD1
Insert Size: 280
Library Construction protocol: Nextera XT DNA Library preparation kit
INDA Experiment Accession: INRX004499
INDA Run Accession: INRR004499
INSDC Accession: ERX12247422
INSDC Run Accession: ERR12874996
File Details:
INDA Run Accession: INRR004499
INSDC Accession: ERX12247422
INSDC Run Accession: ERR12874996
File Details:
| S.No | File name | Size in bytes(Total) | Base Count |
|---|---|---|---|
| 1 | Lactobacillus_S1_L001_R1_001_Run2.fastq.gz | 226343408 | 263788685 |
| 2 | Lactobacillus_S1_L001_R2_001_Run2.fastq.gz | 244104087 | 269191889 |